RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeast

Gene RPA43, Length 981 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPA43	YOR340C	YGR018C	P53211	109 aa		2.61	□□□□□ -1.99
RPA43	YOR340C	MIX17	Q03667	156 aa		2.61	□□□□□ -1.99
RPA43	YOR340C	YMR244W	Q04018	355 aa		2.61	□□□□□ -1.99
RPA43	YOR340C	YOR292C	Q08743	309 aa		2.61	□□□□□ -1.99
RPA43	YOR340C	ADH1	P00330	348 aa	Known RBP	2.6	□□□□□ -1.99
RPA43	YOR340C	YCR025C	P25352	136 aa		2.6	□□□□□ -1.99
RPA43	YOR340C	YCR101C	P25607	182 aa		2.6	□□□□□ -1.99
RPA43	YOR340C	RFA3	P26755	122 aa	Known RBP	2.6	□□□□□ -1.99
RPA43	YOR340C	SUA5	P32579	426 aa		2.6	□□□□□ -1.99
RPA43	YOR340C	UTP11	P34247	250 aa	Predicted RBP	2.6	□□□□□ -1.99
RPA43	YOR340C	CBT1	P36038	271 aa	Predicted RBP	2.6	□□□□□ -1.99
RPA43	YOR340C	FCY21	P40039	528 aa		2.6	□□□□□ -1.99
RPA43	YOR340C	AGX1	P43567	385 aa		2.6	□□□□□ -1.99
RPA43	YOR340C	TTI2	P47168	421 aa		2.6	□□□□□ -1.99
RPA43	YOR340C	TPN1	P53099	579 aa		2.6	□□□□□ -1.99
RPA43	YOR340C	SLX9	P53251	210 aa	Predicted RBP	2.6	□□□□□ -1.99
RPA43	YOR340C	ALG9	P53868	555 aa	Known RBP	2.6	□□□□□ -1.99
RPA43	YOR340C	YML018C	Q03730	393 aa		2.6	□□□□□ -1.99
RPA43	YOR340C	SYM1	Q06563	197 aa		2.6	□□□□□ -1.99
RPA43	YOR340C	ARR2	Q06597	130 aa		2.6	□□□□□ -1.99
RPA43	YOR340C	YLR031W	Q07978	186 aa		2.6	□□□□□ -1.99
RPA43	YOR340C	MED4	Q12343	284 aa		2.6	□□□□□ -1.99
RPA43	YOR340C	BBP1	Q12365	385 aa		2.6	□□□□□ -1.99
RPA43	YOR340C	YPR108W-A	Q3E7B3	70 aa		2.6	□□□□□ -1.99
RPA43	YOR340C	YOL085C	Q99345	113 aa		2.6	□□□□□ -1.99
RPA43	YOR340C	PET494	P07390	489 aa	Predicted RBP	2.59	□□□□□ -1.99
RPA43	YOR340C	SPS18	P32572	300 aa		2.59	□□□□□ -1.99
RPA43	YOR340C	YKR045C	P36138	183 aa		2.59	□□□□□ -1.99
RPA43	YOR340C	IPI1	P38803	334 aa	Predicted RBP	2.59	□□□□□ -1.99
RPA43	YOR340C	FIP1	P45976	327 aa		2.59	□□□□□ -1.99
RPA43	YOR340C	TAD2	P47058	250 aa		2.59	□□□□□ -1.99
RPA43	YOR340C	SOL1	P50278	321 aa		2.59	□□□□□ -1.99
RPA43	YOR340C	NOC4	Q06512	552 aa	Predicted RBP	2.59	□□□□□ -1.99
RPA43	YOR340C	YOR385W	Q08909	290 aa		2.59	□□□□□ -1.99
RPA43	YOR340C	DFM1	Q12743	341 aa	Known RBP	2.59	□□□□□ -1.99
RPA43	YOR340C	HUG1	Q6Q5K6	68 aa		2.59	□□□□□ -1.99
RPA43	YOR340C	YLR365W	Q7LIF2	110 aa		2.59	□□□□□ -1.99
RPA43	YOR340C	TPI1	P00942	248 aa	Known RBP	2.58	□□□□□ -2
RPA43	YOR340C	PET54	P10834	293 aa		2.58	□□□□□ -2
RPA43	YOR340C	FUS3	P16892	353 aa	Known RBP	2.58	□□□□□ -2
RPA43	YOR340C	MRS4	P23500	304 aa		2.58	□□□□□ -2
RPA43	YOR340C	TRR1	P29509	319 aa	Known RBP	2.58	□□□□□ -2
RPA43	YOR340C	UTP30	P36144	274 aa	Known RBP	2.58	□□□□□ -2
RPA43	YOR340C	POP8	P38208	133 aa		2.58	□□□□□ -2
RPA43	YOR340C	AGE2	P40529	298 aa		2.58	□□□□□ -2
RPA43	YOR340C	YJR056C	P47115	236 aa		2.58	□□□□□ -2
RPA43	YOR340C	RSM27	P53305	110 aa		2.58	□□□□□ -2
RPA43	YOR340C	LSM7	P53905	115 aa	Known RBP	2.58	□□□□□ -2
RPA43	YOR340C	SRL4	Q03085	281 aa		2.58	□□□□□ -2
RPA43	YOR340C	THI74	Q04083	370 aa		2.58	□□□□□ -2
RPA43	YOR340C	CTR3	Q06686	241 aa		2.58	□□□□□ -2
RPA43	YOR340C	FEX2	Q08991	375 aa		2.58	□□□□□ -2
RPA43	YOR340C	DGK1	Q12382	290 aa		2.58	□□□□□ -2
RPA43	YOR340C	YOS1	Q3E834	85 aa		2.58	□□□□□ -2
RPA43	YOR340C	PET20	Q99373	253 aa		2.58	□□□□□ -2
RPA43	YOR340C	TOM40	P23644	387 aa	Known RBP	2.57	□□□□□ -2
RPA43	YOR340C	ROX3	P25046	220 aa		2.57	□□□□□ -2
RPA43	YOR340C	ERG2	P32352	222 aa		2.57	□□□□□ -2
RPA43	YOR340C	HYM1	P32464	399 aa		2.57	□□□□□ -2
RPA43	YOR340C	YKL102C	P34249	101 aa		2.57	□□□□□ -2
RPA43	YOR340C	PAN3	P36102	679 aa	Predicted RBP	2.57	□□□□□ -2
RPA43	YOR340C	AIM29	P36154	155 aa		2.57	□□□□□ -2
RPA43	YOR340C	MRPS9	P38120	278 aa		2.57	□□□□□ -2
RPA43	YOR340C	IKI1	P38874	309 aa		2.57	□□□□□ -2
RPA43	YOR340C	YKE4	P40544	346 aa		2.57	□□□□□ -2
RPA43	YOR340C	YGL118C	P53132	145 aa		2.57	□□□□□ -2
RPA43	YOR340C	ECM19	Q06011	112 aa		2.57	□□□□□ -2
RPA43	YOR340C	FEX1	Q08913	375 aa		2.57	□□□□□ -2
RPA43	YOR340C	BOL1	Q3E793	110 aa		2.57	□□□□□ -2
RPA43	YOR340C	PRS4	P38063	326 aa	Predicted RBP	2.56	□□□□□ -2
RPA43	YOR340C	AIM25	P47140	327 aa		2.56	□□□□□ -2
RPA43	YOR340C	YPD1	Q07688	167 aa		2.56	□□□□□ -2
RPA43	YOR340C	SDO1	Q07953	250 aa	Known RBP	2.56	□□□□□ -2
RPA43	YOR340C	ATG5	Q12380	294 aa		2.56	□□□□□ -2
RPA43	YOR340C	YAL063C-A	Q3E791	96 aa		2.56	□□□□□ -2
RPA43	YOR340C	SPS2	P08459	502 aa		2.55	□□□□□ -2
RPA43	YOR340C	NHP6B	P11633	99 aa	Known RBP	2.55	□□□□□ -2
RPA43	YOR340C	YMR31	P19955	123 aa		2.55	□□□□□ -2
RPA43	YOR340C	COX10	P21592	462 aa		2.55	□□□□□ -2
RPA43	YOR340C	SUA7	P29055	345 aa	Predicted RBP	2.55	□□□□□ -2
RPA43	YOR340C	MRPL3	P36516	390 aa		2.55	□□□□□ -2
RPA43	YOR340C	COS8	P38723	381 aa		2.55	□□□□□ -2
RPA43	YOR340C	BMT5	P40493	336 aa		2.55	□□□□□ -2
RPA43	YOR340C	RPL9B	P51401	191 aa	Known RBP	2.55	□□□□□ -2
RPA43	YOR340C	NIF3	P53081	288 aa		2.55	□□□□□ -2
RPA43	YOR340C	TIM21	P53220	239 aa		2.55	□□□□□ -2
RPA43	YOR340C	LPP1	Q04396	274 aa		2.55	□□□□□ -2
RPA43	YOR340C	ARC18	Q05933	178 aa	Known RBP	2.55	□□□□□ -2
RPA43	YOR340C	SCP1	Q08873	200 aa		2.55	□□□□□ -2
RPA43	YOR340C	ATG31	Q12421	196 aa		2.55	□□□□□ -2
RPA43	YOR340C	RDI1	Q12434	202 aa		2.55	□□□□□ -2
RPA43	YOR340C	RPL9A	P05738	191 aa	Known RBP	2.54	□□□□□ -2
RPA43	YOR340C	STF2	P16965	84 aa		2.54	□□□□□ -2
RPA43	YOR340C	PHO85	P17157	305 aa		2.54	□□□□□ -2
RPA43	YOR340C	YCR016W	P25617	290 aa	Known RBP	2.54	□□□□□ -2
RPA43	YOR340C	TCA17	P32613	152 aa		2.54	□□□□□ -2
RPA43	YOR340C	MID2	P36027	376 aa		2.54	□□□□□ -2
RPA43	YOR340C	PRY2	P36110	329 aa		2.54	□□□□□ -2
RPA43	YOR340C	BDH1	P39714	382 aa		2.54	□□□□□ -2
RPA43	YOR340C	EDC2	P40023	145 aa	Predicted RBP	2.54	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms