RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C SPO13P23624 291 aa1.12□□□□□ -2.23
SHE4YOR035C PAN3P36102 679 aaPredicted RBP1.12□□□□□ -2.23
SHE4YOR035C YER034WP40022 185 aaKnown RBP1.12□□□□□ -2.23
SHE4YOR035C MPC3P53311 146 aa1.12□□□□□ -2.23
SHE4YOR035C ODC2Q99297 307 aa1.12□□□□□ -2.23
SHE4YOR035C OCH1P31755 480 aa1.12□□□□□ -2.23
SHE4YOR035C RFC4P40339 323 aaKnown RBP1.12□□□□□ -2.23
SHE4YOR035C GET1P53192 235 aa1.12□□□□□ -2.23
SHE4YOR035C GGA1Q06336 557 aa1.12□□□□□ -2.23
SHE4YOR035C MATALPHA2P0CY08 210 aa1.11□□□□□ -2.23
SHE4YOR035C HMLALPHA2P0CY09 210 aa1.11□□□□□ -2.23
SHE4YOR035C AIM2P39721 246 aa1.11□□□□□ -2.23
SHE4YOR035C YPL073CP40323 161 aa1.11□□□□□ -2.23
SHE4YOR035C YIL086CP40503 102 aa1.11□□□□□ -2.23
SHE4YOR035C RCE1Q03530 315 aa1.11□□□□□ -2.23
SHE4YOR035C FUS2Q05670 677 aa1.11□□□□□ -2.23
SHE4YOR035C MBF1O14467 151 aaKnown RBP1.11□□□□□ -2.23
SHE4YOR035C ECM4P36156 370 aa1.11□□□□□ -2.23
SHE4YOR035C ARO8P53090 500 aaKnown RBP1.11□□□□□ -2.23
SHE4YOR035C YPR174CQ06616 221 aaPredicted RBP1.11□□□□□ -2.23
SHE4YOR035C DGA1Q08650 418 aa1.11□□□□□ -2.23
SHE4YOR035C YEA4P40004 342 aa1.1□□□□□ -2.23
SHE4YOR035C MMS2P53152 137 aa1.1□□□□□ -2.23
SHE4YOR035C GRX8Q05926 109 aa1.1□□□□□ -2.23
SHE4YOR035C YKT6P36015 200 aaKnown RBP1.1□□□□□ -2.23
SHE4YOR035C YLR046CQ12253 270 aa1.1□□□□□ -2.23
SHE4YOR035C UBR1P19812 1950 aa1.09□□□□□ -2.23
SHE4YOR035C CNB1P25296 175 aa1.09□□□□□ -2.23
SHE4YOR035C FLX1P40464 311 aa1.09□□□□□ -2.23
SHE4YOR035C YMR099CQ03161 297 aaKnown RBP1.09□□□□□ -2.23
SHE4YOR035C PIR1Q03178 341 aa1.09□□□□□ -2.23
SHE4YOR035C MRPS17Q03246 237 aaPredicted RBP1.09□□□□□ -2.23
SHE4YOR035C GRX3Q03835 250 aa1.09□□□□□ -2.23
SHE4YOR035C MDM35O60200 86 aa1.08□□□□□ -2.24
SHE4YOR035C EDC3P39998 551 aaKnown RBP1.08□□□□□ -2.24
SHE4YOR035C SER2P42941 309 aa1.08□□□□□ -2.24
SHE4YOR035C YAE1P47118 141 aaPredicted RBP1.08□□□□□ -2.24
SHE4YOR035C EMC4P53073 190 aa1.08□□□□□ -2.24
SHE4YOR035C YCL012CQ8J0M4 134 aa1.08□□□□□ -2.24
SHE4YOR035C MRS1P07266 363 aa1.08□□□□□ -2.24
SHE4YOR035C CUP9P41817 306 aa1.08□□□□□ -2.24
SHE4YOR035C YNL247WP53852 767 aaKnown RBP1.08□□□□□ -2.24
SHE4YOR035C YPK2P18961 677 aa1.07□□□□□ -2.24
SHE4YOR035C HYR1P40581 163 aaKnown RBP1.07□□□□□ -2.24
SHE4YOR035C NOP19P53317 196 aaPredicted RBP1.07□□□□□ -2.24
SHE4YOR035C CWC27Q02770 301 aa1.07□□□□□ -2.24
SHE4YOR035C DYN3Q04949 312 aa1.07□□□□□ -2.24
SHE4YOR035C YOL014WQ08110 124 aa1.07□□□□□ -2.24
SHE4YOR035C IRC23Q08416 157 aa1.07□□□□□ -2.24
SHE4YOR035C YER134CP40081 178 aa1.07□□□□□ -2.24
SHE4YOR035C SOK1P40317 901 aa1.07□□□□□ -2.24
SHE4YOR035C SKI6P46948 246 aaPredicted RBP1.07□□□□□ -2.24
SHE4YOR035C CGR1P53188 120 aa1.07□□□□□ -2.24
SHE4YOR035C YMR295CQ03559 197 aa1.07□□□□□ -2.24
SHE4YOR035C YLR036CQ07986 203 aa1.07□□□□□ -2.24
SHE4YOR035C ABP140Q08641 628 aaKnown RBP1.07□□□□□ -2.24
SHE4YOR035C SLH1P53327 1967 aaKnown RBP1.06□□□□□ -2.24
SHE4YOR035C AQY2P0CD90 149 aa1.06□□□□□ -2.24
SHE4YOR035C ASF2P32448 525 aaPredicted RBP1.06□□□□□ -2.24
SHE4YOR035C YEL067CP39978 195 aa1.06□□□□□ -2.24
SHE4YOR035C VPS71Q03433 280 aa1.06□□□□□ -2.24
SHE4YOR035C GET4Q12125 312 aa1.06□□□□□ -2.24
SHE4YOR035C IGO2Q9P305 131 aa1.06□□□□□ -2.24
SHE4YOR035C YAR023CD6VPM8 179 aa1.06□□□□□ -2.24
SHE4YOR035C ARP3P47117 449 aaKnown RBP1.06□□□□□ -2.24
SHE4YOR035C PRP11Q07350 266 aaPredicted RBP1.06□□□□□ -2.24
SHE4YOR035C YHL018WP38744 120 aaPredicted RBP1.05□□□□□ -2.24
SHE4YOR035C YJR111CP47148 283 aaKnown RBP1.05□□□□□ -2.24
SHE4YOR035C QCR7P00128 127 aa1.05□□□□□ -2.24
SHE4YOR035C NSP1P14907 823 aaKnown RBP1.05□□□□□ -2.24
SHE4YOR035C MTW1P39731 289 aa1.05□□□□□ -2.24
SHE4YOR035C SMD2Q06217 110 aaKnown RBP1.05□□□□□ -2.24
SHE4YOR035C PEX11Q12462 236 aa1.05□□□□□ -2.24
SHE4YOR035C ADF1Q2V2Q1 113 aa1.05□□□□□ -2.24
SHE4YOR035C YML100W-AQ8TGT0 57 aa1.05□□□□□ -2.24
SHE4YOR035C YHR212W-AP0CX91 67 aa1.04□□□□□ -2.24
SHE4YOR035C YHL042WP38729 150 aa1.04□□□□□ -2.24
SHE4YOR035C YFL065CP43539 102 aa1.04□□□□□ -2.24
SHE4YOR035C RPL37AP49166 88 aaKnown RBP1.04□□□□□ -2.24
SHE4YOR035C YGR035W-AQ45U48 73 aa1.04□□□□□ -2.24
SHE4YOR035C YOR032W-AQ8TGS1 66 aa1.04□□□□□ -2.24
SHE4YOR035C YHL037CP38733 133 aa1.04□□□□□ -2.24
SHE4YOR035C YNL184CP53876 108 aa1.04□□□□□ -2.24
SHE4YOR035C YPR114WQ06107 315 aa1.04□□□□□ -2.24
SHE4YOR035C YLR031WQ07978 186 aa1.04□□□□□ -2.24
SHE4YOR035C FIT2Q08906 153 aa1.04□□□□□ -2.24
SHE4YOR035C COX8P04039 78 aa1.03□□□□□ -2.24
SHE4YOR035C YJL197C-AP0C5P0 93 aa1.03□□□□□ -2.24
SHE4YOR035C PRS3P38689 320 aaKnown RBP1.03□□□□□ -2.24
SHE4YOR035C SNF4P12904 322 aa1.03□□□□□ -2.25
SHE4YOR035C PAM17P36147 197 aa1.03□□□□□ -2.25
SHE4YOR035C DAD4P69851 72 aa1.03□□□□□ -2.25
SHE4YOR035C YMR007WQ03675 126 aa1.03□□□□□ -2.25
SHE4YOR035C SHH3Q04487 196 aa1.03□□□□□ -2.25
SHE4YOR035C YPR013CQ12145 317 aa1.03□□□□□ -2.25
SHE4YOR035C YMR252CQ04814 134 aa1.02□□□□□ -2.25
SHE4YOR035C RNH202Q05635 350 aa1.02□□□□□ -2.25
SHE4YOR035C MGT1P26188 188 aa1.01□□□□□ -2.25
SHE4YOR035C FIG1P38224 298 aa1.01□□□□□ -2.25
SHE4YOR035C PDS1P40316 373 aaPredicted RBP1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms