RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C ADH3P07246 375 aaKnown RBP2.41□□□□□ -2.02
HRD1YOL013C HSP30P25619 332 aa2.41□□□□□ -2.02
HRD1YOL013C UGX2P32772 223 aa2.41□□□□□ -2.02
HRD1YOL013C AIM2P39721 246 aa2.41□□□□□ -2.02
HRD1YOL013C YJL218WP40892 196 aaKnown RBP2.41□□□□□ -2.02
HRD1YOL013C YMR099CQ03161 297 aaKnown RBP2.41□□□□□ -2.02
HRD1YOL013C IES3Q12345 250 aa2.41□□□□□ -2.02
HRD1YOL013C ATP5P09457 212 aa2.41□□□□□ -2.02
HRD1YOL013C MRPL17P36528 281 aa2.41□□□□□ -2.02
HRD1YOL013C RPS20P38701 121 aaKnown RBP2.41□□□□□ -2.02
HRD1YOL013C ARC15P40518 154 aaRIP-Chip data2.41□□□□□ -2.02not detected
HRD1YOL013C ECO1P43605 281 aa2.41□□□□□ -2.02
HRD1YOL013C CCC1P47818 322 aa2.41□□□□□ -2.02
HRD1YOL013C RSM27P53305 110 aa2.41□□□□□ -2.02
HRD1YOL013C SLO1Q3E784 85 aa2.41□□□□□ -2.02
HRD1YOL013C FAS2P19097 1887 aaKnown RBP2.4□□□□□ -2.02
HRD1YOL013C PCL1P24867 279 aa2.4□□□□□ -2.03
HRD1YOL013C PAN3P36102 679 aaPredicted RBP2.4□□□□□ -2.03
HRD1YOL013C ERJ5P43613 295 aaPredicted RBP2.4□□□□□ -2.03
HRD1YOL013C VPS71Q03433 280 aa2.4□□□□□ -2.03
HRD1YOL013C MCH1Q07376 486 aa2.4□□□□□ -2.03
HRD1YOL013C YOR268CQ08734 132 aa2.4□□□□□ -2.03
HRD1YOL013C YLR412C-AQ3E742 68 aa2.4□□□□□ -2.03
HRD1YOL013C YAR023CD6VPM8 179 aa2.39□□□□□ -2.03
HRD1YOL013C CBP6P07253 162 aaPredicted RBP2.39□□□□□ -2.03
HRD1YOL013C TIR1P10863 254 aa2.39□□□□□ -2.03
HRD1YOL013C VMA11P32842 164 aa2.39□□□□□ -2.03
HRD1YOL013C YER181CP40097 107 aa2.39□□□□□ -2.03
HRD1YOL013C HPM1P40481 377 aa2.39□□□□□ -2.03
HRD1YOL013C YFR045WP43617 309 aa2.39□□□□□ -2.03
HRD1YOL013C APS3P47064 194 aa2.39□□□□□ -2.03
HRD1YOL013C XPT1P47165 209 aa2.39□□□□□ -2.03
HRD1YOL013C YGL193CP53097 103 aa2.39□□□□□ -2.03
HRD1YOL013C DIG2Q03373 323 aaKnown RBP2.39□□□□□ -2.03
HRD1YOL013C GAL83Q04739 417 aa2.39□□□□□ -2.03
HRD1YOL013C PIN3Q06449 215 aa2.39□□□□□ -2.03
HRD1YOL013C FKS1P38631 1876 aaKnown RBP2.39□□□□□ -2.03
HRD1YOL013C HIS3P06633 220 aa2.38□□□□□ -2.03
HRD1YOL013C RPS1BP23248 255 aaKnown RBP2.38□□□□□ -2.03
HRD1YOL013C YER188WP40103 239 aa2.38□□□□□ -2.03
HRD1YOL013C PIR5P46999 287 aa2.38□□□□□ -2.03
HRD1YOL013C SBH1P52870 82 aa2.38□□□□□ -2.03
HRD1YOL013C AIF1P52923 378 aa2.38□□□□□ -2.03
HRD1YOL013C HHO1P53551 258 aa2.38□□□□□ -2.03
HRD1YOL013C TMC1Q08422 150 aaPredicted RBP2.38□□□□□ -2.03
HRD1YOL013C POR1P04840 283 aaKnown RBP2.37□□□□□ -2.03
HRD1YOL013C RPS19AP07280 144 aaKnown RBP2.37□□□□□ -2.03
HRD1YOL013C RPS19BP07281 144 aaPredicted RBP2.37□□□□□ -2.03
HRD1YOL013C PTC1P35182 281 aa2.37□□□□□ -2.03
HRD1YOL013C SHE2P36068 246 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
HRD1YOL013C YHR140WP38842 239 aa2.37□□□□□ -2.03
HRD1YOL013C YER134CP40081 178 aa2.37□□□□□ -2.03
HRD1YOL013C MPC3P53311 146 aa2.37□□□□□ -2.03
HRD1YOL013C SLM2P53955 656 aa2.37□□□□□ -2.03
HRD1YOL013C YDR366CP87287 132 aa2.37□□□□□ -2.03
HRD1YOL013C HKR1P41809 1802 aa2.37□□□□□ -2.03
HRD1YOL013C NSP1P14907 823 aaKnown RBP2.37□□□□□ -2.03
HRD1YOL013C MID2P36027 376 aa2.37□□□□□ -2.03
HRD1YOL013C YRA2P36036 203 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
HRD1YOL013C UTH1P36135 365 aa2.37□□□□□ -2.03
HRD1YOL013C GVP36P40531 326 aaKnown RBP2.37□□□□□ -2.03
HRD1YOL013C DSK2P48510 373 aa2.37□□□□□ -2.03
HRD1YOL013C SDH7Q04401 133 aa2.37□□□□□ -2.03
HRD1YOL013C NKP2Q06162 153 aa2.37□□□□□ -2.03
HRD1YOL013C CNL1Q06333 122 aa2.37□□□□□ -2.03
HRD1YOL013C SPC3Q12133 184 aa2.37□□□□□ -2.03
HRD1YOL013C YOR214CQ12282 236 aa2.37□□□□□ -2.03
HRD1YOL013C SAS5Q99314 248 aa2.37□□□□□ -2.03
HRD1YOL013C GSC2P40989 1895 aa2.37□□□□□ -2.03
HRD1YOL013C CPA1P07258 411 aaKnown RBP2.36□□□□□ -2.03
HRD1YOL013C PHO13P19881 312 aa2.36□□□□□ -2.03
HRD1YOL013C MRP49P32388 137 aa2.36□□□□□ -2.03
HRD1YOL013C YKR070WP36151 352 aaKnown RBP2.36□□□□□ -2.03
HRD1YOL013C MRPL24P36525 258 aaPredicted RBP2.36□□□□□ -2.03
HRD1YOL013C YBR220CP38318 560 aa2.36□□□□□ -2.03
HRD1YOL013C GPI2P46961 280 aa2.36□□□□□ -2.03
HRD1YOL013C EAF6P47128 113 aa2.36□□□□□ -2.03
HRD1YOL013C YGR039WP53225 103 aa2.36□□□□□ -2.03
HRD1YOL013C TIM13P53299 105 aa2.36□□□□□ -2.03
HRD1YOL013C HAL1Q01766 294 aa2.36□□□□□ -2.03
HRD1YOL013C ARL3Q02804 198 aa2.36□□□□□ -2.03
HRD1YOL013C CGI121Q03705 181 aaKnown RBP2.36□□□□□ -2.03
HRD1YOL013C YLR099W-AQ3E798 87 aa2.36□□□□□ -2.03
HRD1YOL013C ODC2Q99297 307 aa2.36□□□□□ -2.03
HRD1YOL013C FMP49A0A023PZB3 126 aa2.35□□□□□ -2.03
HRD1YOL013C YOR304C-AO14468 76 aa2.35□□□□□ -2.03
HRD1YOL013C HSP26P15992 214 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
HRD1YOL013C SRP21P32342 167 aa2.35□□□□□ -2.03
HRD1YOL013C HYM1P32464 399 aa2.35□□□□□ -2.03
HRD1YOL013C HTD2P38790 280 aaKnown RBP2.35□□□□□ -2.03
HRD1YOL013C YEL028WP39989 153 aa2.35□□□□□ -2.03
HRD1YOL013C RUB1Q03919 77 aa2.35□□□□□ -2.03
HRD1YOL013C PRP11Q07350 266 aaPredicted RBP2.35□□□□□ -2.03
HRD1YOL013C FCY1Q12178 158 aa2.35□□□□□ -2.03
HRD1YOL013C ATP20Q12233 115 aa2.35□□□□□ -2.03
HRD1YOL013C YIR021W-AQ3E739 70 aa2.35□□□□□ -2.03
HRD1YOL013C KIN28P06242 306 aa2.34□□□□□ -2.03
HRD1YOL013C GSP1P32835 219 aaKnown RBP2.34□□□□□ -2.03
HRD1YOL013C GSP2P32836 220 aaKnown RBP2.34□□□□□ -2.03
HRD1YOL013C YKR032WP36127 104 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 73.2 ms