RNA–Protein interactions for RNA: YNL250W

RAD50, Transcript of Subunit of MRX complex with Mre11p and Xrs2p, yeast

Gene RAD50, Length 3,939 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD50	YNL250W	NVJ1	P38881	321 aa		0.88	□□□□□ -2.27
RAD50	YNL250W	YJR111C	P47148	283 aa	Known RBP	0.88	□□□□□ -2.27
RAD50	YNL250W	YIP3	P53633	176 aa		0.88	□□□□□ -2.27
RAD50	YNL250W	YLR460C	P54007	376 aa		0.88	□□□□□ -2.27
RAD50	YNL250W	FUS2	Q05670	677 aa		0.88	□□□□□ -2.27
RAD50	YNL250W	YLR412C-A	Q3E742	68 aa		0.88	□□□□□ -2.27
RAD50	YNL250W	IGO2	Q9P305	131 aa		0.88	□□□□□ -2.27
RAD50	YNL250W	GCN1	P33892	2672 aa	Known RBP	0.87	□□□□□ -2.27
RAD50	YNL250W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.87	□□□□□ -2.27	not detected
RAD50	YNL250W	SEC11	P15367	167 aa		0.87	□□□□□ -2.27
RAD50	YNL250W	TAH1	P25638	111 aa	Predicted RBP	0.87	□□□□□ -2.27
RAD50	YNL250W	TFC1	P32367	649 aa		0.87	□□□□□ -2.27
RAD50	YNL250W	LSM4	P40070	187 aa	Known RBP	0.87	□□□□□ -2.27
RAD50	YNL250W	DAD4	P69851	72 aa		0.87	□□□□□ -2.27
RAD50	YNL250W	HPT1	Q04178	221 aa	Known RBP	0.87	□□□□□ -2.27
RAD50	YNL250W	YLR162W	Q06235	118 aa		0.87	□□□□□ -2.27
RAD50	YNL250W	DGA1	Q08650	418 aa		0.87	□□□□□ -2.27
RAD50	YNL250W	POR1	P04840	283 aa	Known RBP	0.87	□□□□□ -2.27
RAD50	YNL250W	CPA1	P07258	411 aa	Known RBP	0.87	□□□□□ -2.27
RAD50	YNL250W	PAN3	P36102	679 aa	Predicted RBP	0.87	□□□□□ -2.27
RAD50	YNL250W	YFL019C	P43576	117 aa		0.87	□□□□□ -2.27
RAD50	YNL250W	EAF6	P47128	113 aa		0.87	□□□□□ -2.27
RAD50	YNL250W	GPI17	Q04080	534 aa		0.87	□□□□□ -2.27
RAD50	YNL250W	GRE1	Q08969	168 aa		0.87	□□□□□ -2.27
RAD50	YNL250W	TVP38	P36164	337 aa		0.87	□□□□□ -2.27
RAD50	YNL250W	FES1	P38260	290 aa		0.87	□□□□□ -2.27
RAD50	YNL250W	KNH1	P50112	268 aa		0.87	□□□□□ -2.27
RAD50	YNL250W	RAD50	P12753	1312 aa		0.87	□□□□□ -2.27
RAD50	YNL250W	TIR1	P10863	254 aa		0.86	□□□□□ -2.27
RAD50	YNL250W	SOK1	P40317	901 aa		0.86	□□□□□ -2.27
RAD50	YNL250W	RRP17	Q04031	235 aa	Predicted RBP	0.86	□□□□□ -2.27
RAD50	YNL250W	RNH202	Q05635	350 aa		0.86	□□□□□ -2.27
RAD50	YNL250W	YLR036C	Q07986	203 aa		0.86	□□□□□ -2.27
RAD50	YNL250W	YLR050C	Q12155	161 aa	Known RBP	0.86	□□□□□ -2.27
RAD50	YNL250W	YOR342C	Q12182	319 aa		0.86	□□□□□ -2.27
RAD50	YNL250W	IDP1	P21954	428 aa	Known RBP	0.86	□□□□□ -2.27
RAD50	YNL250W	YKR045C	P36138	183 aa		0.86	□□□□□ -2.27
RAD50	YNL250W	MTW1	P39731	289 aa		0.86	□□□□□ -2.27
RAD50	YNL250W	CUE4	Q04201	117 aa	Predicted RBP	0.86	□□□□□ -2.27
RAD50	YNL250W	YDR278C	Q05612	105 aa		0.86	□□□□□ -2.27
RAD50	YNL250W	GRX8	Q05926	109 aa		0.86	□□□□□ -2.27
RAD50	YNL250W	YDL180W	Q12301	547 aa		0.86	□□□□□ -2.27
RAD50	YNL250W	RPL40A	P0CH08	128 aa	Known RBP	0.86	□□□□□ -2.27
RAD50	YNL250W	RPL40B	P0CH09	128 aa	Known RBP	0.86	□□□□□ -2.27
RAD50	YNL250W	YGL010W	P25338	174 aa		0.86	□□□□□ -2.27
RAD50	YNL250W	YKL102C	P34249	101 aa		0.86	□□□□□ -2.27
RAD50	YNL250W	RPS28B	P0C0X0	67 aa	Known RBP	0.85	□□□□□ -2.27
RAD50	YNL250W	VPS51	P36116	164 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	YBR220C	P38318	560 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	NSG1	P38837	291 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	AIM34	Q03673	198 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	SMD2	Q06217	110 aa	Known RBP	0.85	□□□□□ -2.27
RAD50	YNL250W	SHH4	Q06236	168 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.85	□□□□□ -2.27
RAD50	YNL250W	GSP1	P32835	219 aa	Known RBP	0.85	□□□□□ -2.27
RAD50	YNL250W	GSP2	P32836	220 aa	Known RBP	0.85	□□□□□ -2.27
RAD50	YNL250W	YER121W	P40076	114 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	RFC2	P40348	353 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	GPI14	P47088	403 aa	Known RBP	0.85	□□□□□ -2.27
RAD50	YNL250W	TMA22	P47089	198 aa	Predicted RBP	0.85	□□□□□ -2.27
RAD50	YNL250W	TTI2	P47168	421 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	BAT2	P47176	376 aa	Known RBP	0.85	□□□□□ -2.27
RAD50	YNL250W	HSK3	P69852	69 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	ATP20	Q12233	115 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	DGK1	Q12382	290 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	CMC2	Q3E7A4	109 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	ECM4	P36156	370 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	YBR219C	P38317	127 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	AIM2	P39721	246 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	YER076C	P40049	302 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	FLX1	P40464	311 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	YAE1	P47118	141 aa	Predicted RBP	0.85	□□□□□ -2.27
RAD50	YNL250W	THG1	P53215	237 aa	Known RBP	0.85	□□□□□ -2.27
RAD50	YNL250W	SAY1	P53324	424 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	VPS71	Q03433	280 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	SHH3	Q04487	196 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	YML100W-A	Q8TGT0	57 aa		0.85	□□□□□ -2.27
RAD50	YNL250W	RPS24A	P0CX31	135 aa	Known RBP	0.84	□□□□□ -2.27
RAD50	YNL250W	RPS24B	P0CX32	135 aa	Known RBP	0.84	□□□□□ -2.27
RAD50	YNL250W	GLR1	P41921	483 aa	Known RBP	0.84	□□□□□ -2.27
RAD50	YNL250W	ERJ5	P43613	295 aa	Predicted RBP	0.84	□□□□□ -2.27
RAD50	YNL250W	XPT1	P47165	209 aa		0.84	□□□□□ -2.27
RAD50	YNL250W	MZM1	Q03429	123 aa	Predicted RBP	0.84	□□□□□ -2.27
RAD50	YNL250W	CSI2	Q08054	341 aa		0.84	□□□□□ -2.27
RAD50	YNL250W	RPL2A	P0CX45	254 aa	Known RBP	0.84	□□□□□ -2.27
RAD50	YNL250W	RPL2B	P0CX46	254 aa	Known RBP	0.84	□□□□□ -2.27
RAD50	YNL250W	FYV4	P38783	130 aa	Predicted RBP	0.84	□□□□□ -2.27
RAD50	YNL250W	RPL13B	P40212	199 aa	Known RBP	0.84	□□□□□ -2.27
RAD50	YNL250W	RAD28	Q12021	506 aa		0.84	□□□□□ -2.27
RAD50	YNL250W	DAS2	Q12084	232 aa		0.84	□□□□□ -2.27
RAD50	YNL250W	RPL13A	Q12690	199 aa	Predicted RBP	0.84	□□□□□ -2.27
RAD50	YNL250W	FAS1	P07149	2051 aa	Known RBP	0.84	□□□□□ -2.27
RAD50	YNL250W	TRX3	P25372	127 aa		0.84	□□□□□ -2.28
RAD50	YNL250W	SPC25	P40014	221 aa		0.84	□□□□□ -2.28
RAD50	YNL250W	SOL1	P50278	321 aa		0.84	□□□□□ -2.28
RAD50	YNL250W	YOL014W	Q08110	124 aa		0.84	□□□□□ -2.28
RAD50	YNL250W	YOR381W-A	Q3E804	55 aa		0.84	□□□□□ -2.28
RAD50	YNL250W	GIM4	P40005	111 aa	Known RBP	0.83	□□□□□ -2.28
RAD50	YNL250W	RDI1	Q12434	202 aa		0.83	□□□□□ -2.28
RAD50	YNL250W	YPR014C	Q6B0W2	109 aa		0.83	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms