RNA–Protein interactions for RNA: YNL054W-B

YNL054W-B, Transcript of TyB Gag-Pol protein, yeastyeast

Gene YNL054W-B, Length 5,250 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-BYNL054W-B SNO1Q03144 224 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B RVB1Q03940 463 aaKnown RBP0.14□□□□□ -2.39
YNL054W-BYNL054W-B LPP1Q04396 274 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B SCP1Q08873 200 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B FIT2Q08906 153 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B YDL157CQ12082 118 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B ODC2Q99297 307 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B UBA3Q99344 299 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B PIS1P06197 220 aaKnown RBP0.14□□□□□ -2.39
YNL054W-BYNL054W-B RPS23AP0CX29 145 aaKnown RBP0.14□□□□□ -2.39
YNL054W-BYNL054W-B RPS23BP0CX30 145 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B RSR1P13856 272 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B RED1P14291 827 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B IDP1P21954 428 aaKnown RBP0.14□□□□□ -2.39
YNL054W-BYNL054W-B ARO7P32178 256 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B VMA11P32842 164 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B VPS21P36017 210 aaKnown RBP0.14□□□□□ -2.39
YNL054W-BYNL054W-B MCH2P36032 473 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B GRE3P38715 327 aaKnown RBP RIP-Chip data0.14□□□□□ -2.39not detected
YNL054W-BYNL054W-B PET8P38921 284 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B AIM2P39721 246 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B THO1P40040 218 aaKnown RBP0.14□□□□□ -2.39
YNL054W-BYNL054W-B AIM19P40502 157 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B NAS2P40555 220 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B YCH1P42937 148 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B PAM16P42949 149 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B YJL028WP47062 111 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B YJR012CP47087 207 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B YJR111CP47148 283 aaKnown RBP0.14□□□□□ -2.39
YNL054W-BYNL054W-B YJR146WP47174 117 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B PRP3Q03338 469 aaPredicted RBP0.14□□□□□ -2.39
YNL054W-BYNL054W-B MRPS8Q03799 155 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B KRE28Q04431 385 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B MSC3Q05812 728 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B NMA1Q06178 401 aaKnown RBP0.14□□□□□ -2.39
YNL054W-BYNL054W-B PRP11Q07350 266 aaPredicted RBP0.14□□□□□ -2.39
YNL054W-BYNL054W-B FYV7Q12247 151 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B PCL9Q12477 304 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B RPS22BQ3E7Y3 130 aaKnown RBP0.14□□□□□ -2.39
YNL054W-BYNL054W-B THP2O13539 261 aaKnown RBP0.14□□□□□ -2.39
YNL054W-BYNL054W-B TPI1P00942 248 aaKnown RBP0.14□□□□□ -2.39
YNL054W-BYNL054W-B RPL25P04456 142 aaKnown RBP0.14□□□□□ -2.39
YNL054W-BYNL054W-B CPA1P07258 411 aaKnown RBP0.14□□□□□ -2.39
YNL054W-BYNL054W-B ATP5P09457 212 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B YFR010W-AP0C5N0 62 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B MRPL31P14063 131 aaPredicted RBP0.14□□□□□ -2.39
YNL054W-BYNL054W-B GRX2P17695 143 aaKnown RBP0.14□□□□□ -2.39
YNL054W-BYNL054W-B MRP17P28778 131 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B SCM4P32564 187 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B TRS20P38334 175 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B COS8P38723 381 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B BIG1P38813 335 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B TEM1P38987 245 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B SLM1P40485 686 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B TDA4P47153 279 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B SRB7P47822 140 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B YGR149WP48236 432 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B AVT4P50944 713 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B PKP2P53170 491 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B LST7P53237 242 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B PAU4P53427 120 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B YNL190WP53872 204 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B ERV25P54837 211 aaKnown RBP0.14□□□□□ -2.39
YNL054W-BYNL054W-B YCL001W-AP87012 153 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B CYT2Q00873 224 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B MRX11Q03079 207 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B CGI121Q03705 181 aaKnown RBP0.14□□□□□ -2.39
YNL054W-BYNL054W-B MIX14Q04341 121 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B GPN3Q06543 272 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B AIM6Q07716 390 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B PAU23Q07987 124 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B MSA1Q08471 629 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B YOR114WQ12219 294 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B PAU17Q12370 124 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B TDA8Q6B2U8 126 aa0.14□□□□□ -2.39
YNL054W-BYNL054W-B MBF1O14467 151 aaKnown RBP0.13□□□□□ -2.39
YNL054W-BYNL054W-B TRP1P00912 224 aa0.13□□□□□ -2.39
YNL054W-BYNL054W-B HTB2P02294 131 aa0.13□□□□□ -2.39
YNL054W-BYNL054W-B REP2P03872 296 aa0.13□□□□□ -2.39
YNL054W-BYNL054W-B SEC59P20048 519 aa0.13□□□□□ -2.39
YNL054W-BYNL054W-B PWP1P21304 576 aaKnown RBP0.13□□□□□ -2.39
YNL054W-BYNL054W-B RFA3P26755 122 aaKnown RBP0.13□□□□□ -2.39
YNL054W-BYNL054W-B PEX3P28795 441 aa0.13□□□□□ -2.39
YNL054W-BYNL054W-B ACB1P31787 87 aa0.13□□□□□ -2.39
YNL054W-BYNL054W-B RPA12P32529 125 aaKnown RBP0.13□□□□□ -2.39
YNL054W-BYNL054W-B SUA5P32579 426 aa0.13□□□□□ -2.39
YNL054W-BYNL054W-B ARC19P33204 171 aaKnown RBP0.13□□□□□ -2.39
YNL054W-BYNL054W-B NTF2P33331 125 aaKnown RBP0.13□□□□□ -2.39
YNL054W-BYNL054W-B PRP18P33411 251 aaPredicted RBP0.13□□□□□ -2.39
YNL054W-BYNL054W-B PAU16P35994 123 aa0.13□□□□□ -2.39
YNL054W-BYNL054W-B COS9P36034 407 aa0.13□□□□□ -2.39
YNL054W-BYNL054W-B YHR022CP38763 256 aa0.13□□□□□ -2.39
YNL054W-BYNL054W-B GCV3P39726 170 aaPredicted RBP0.13□□□□□ -2.39
YNL054W-BYNL054W-B SOK1P40317 901 aa0.13□□□□□ -2.39
YNL054W-BYNL054W-B BMT5P40493 336 aa0.13□□□□□ -2.39
YNL054W-BYNL054W-B LST8P41318 303 aa0.13□□□□□ -2.39
YNL054W-BYNL054W-B SER2P42941 309 aa0.13□□□□□ -2.39
YNL054W-BYNL054W-B TTI2P47168 421 aa0.13□□□□□ -2.39
YNL054W-BYNL054W-B RPL37BP51402 88 aaKnown RBP0.13□□□□□ -2.39
YNL054W-BYNL054W-B NUP49Q02199 472 aa0.13□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms