RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W FCY2P17064 533 aa3.11□□□□□ -1.91
USA1YML029W UTR5P32630 166 aa3.11□□□□□ -1.91
USA1YML029W ICS2P38284 255 aa3.11□□□□□ -1.91
USA1YML029W SPC25P40014 221 aa3.11□□□□□ -1.91
USA1YML029W LST8P41318 303 aa3.11□□□□□ -1.91
USA1YML029W YNL234WP53857 426 aa3.11□□□□□ -1.91
USA1YML029W FMP41P53889 259 aaKnown RBP3.11□□□□□ -1.91
USA1YML029W FYV6P53913 173 aa3.11□□□□□ -1.91
USA1YML029W DYN2Q02647 92 aa3.11□□□□□ -1.91
USA1YML029W RUB1Q03919 77 aa3.11□□□□□ -1.91
USA1YML029W SDH7Q04401 133 aa3.11□□□□□ -1.91
USA1YML029W HOR7Q05827 59 aa3.11□□□□□ -1.91
USA1YML029W ECM25P32525 599 aa3.11□□□□□ -1.91
USA1YML029W YBL071CP38185 102 aa3.11□□□□□ -1.91
USA1YML029W WSS1P38838 269 aa3.11□□□□□ -1.91
USA1YML029W YGR269WP40326 108 aa3.11□□□□□ -1.91
USA1YML029W YGR151CP53287 111 aa3.11□□□□□ -1.91
USA1YML029W BOR1P53838 576 aa3.11□□□□□ -1.91
USA1YML029W ADD37Q03233 198 aa3.11□□□□□ -1.91
USA1YML029W USV1Q12132 391 aa3.11□□□□□ -1.91
USA1YML029W COX19Q3E731 98 aa3.11□□□□□ -1.91
USA1YML029W RPS25BP0C0T4 108 aaKnown RBP3.1□□□□□ -1.91
USA1YML029W YER190C-BP0CX94 160 aa3.1□□□□□ -1.91
USA1YML029W YEL077W-AP0CX95 160 aa3.1□□□□□ -1.91
USA1YML029W YGR296C-BP0CX96 160 aa3.1□□□□□ -1.91
USA1YML029W YPL283W-BP0CX97 160 aa3.1□□□□□ -1.91
USA1YML029W YPR204C-AP0CX98 160 aa3.1□□□□□ -1.91
USA1YML029W YFL068WP0CX99 160 aa3.1□□□□□ -1.91
USA1YML029W YLL066W-AP0CY00 160 aa3.1□□□□□ -1.91
USA1YML029W YLL067W-AP0CY01 160 aa3.1□□□□□ -1.91
USA1YML029W QCR9P22289 66 aa3.1□□□□□ -1.91
USA1YML029W AHT1P29589 182 aa3.1□□□□□ -1.91
USA1YML029W MSK1P32048 576 aa3.1□□□□□ -1.91
USA1YML029W VPS55P47111 140 aa3.1□□□□□ -1.91
USA1YML029W CAB4P53332 305 aa3.1□□□□□ -1.91
USA1YML029W DUG3P53871 357 aa3.1□□□□□ -1.91
USA1YML029W TMA23Q03525 211 aa3.1□□□□□ -1.91
USA1YML029W YOR015WQ12169 119 aa3.1□□□□□ -1.91
USA1YML029W FCY1Q12178 158 aa3.1□□□□□ -1.91
USA1YML029W POC4Q12245 148 aaPredicted RBP3.1□□□□□ -1.91
USA1YML029W JID1Q12350 301 aa3.1□□□□□ -1.91
USA1YML029W RPS25AQ3E792 108 aaPredicted RBP3.1□□□□□ -1.91
USA1YML029W VMA9Q3E7B6 73 aa3.1□□□□□ -1.91
USA1YML029W DFR1P07807 211 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
USA1YML029W LDS1P31379 325 aa3.1□□□□□ -1.91
USA1YML029W SRB6P32570 121 aa3.1□□□□□ -1.91
USA1YML029W YKR045CP36138 183 aa3.1□□□□□ -1.91
USA1YML029W FLO5P38894 1075 aa3.1□□□□□ -1.91
USA1YML029W SMD3P43321 101 aaKnown RBP3.1□□□□□ -1.91
USA1YML029W MRS3P10566 314 aa3.09□□□□□ -1.91
USA1YML029W ELO2P25358 347 aa3.09□□□□□ -1.91
USA1YML029W MRPL38P35996 138 aaPredicted RBP3.09□□□□□ -1.91
USA1YML029W RRT1P38192 103 aa3.09□□□□□ -1.91
USA1YML029W CSH1P38287 376 aa3.09□□□□□ -1.91
USA1YML029W PTC7P38797 343 aa3.09□□□□□ -1.91
USA1YML029W BDH1P39714 382 aa3.09□□□□□ -1.91
USA1YML029W YPI1P43587 155 aa3.09□□□□□ -1.91
USA1YML029W MCM22P47167 239 aa3.09□□□□□ -1.91
USA1YML029W SOD1P00445 154 aaKnown RBP3.09□□□□□ -1.92
USA1YML029W SPO13P23624 291 aa3.09□□□□□ -1.92
USA1YML029W CDC50P25656 391 aa3.09□□□□□ -1.92
USA1YML029W YBL059WP34224 193 aa3.09□□□□□ -1.92
USA1YML029W YDL186WP48568 277 aa3.09□□□□□ -1.92
USA1YML029W MCH1Q07376 486 aa3.09□□□□□ -1.92
USA1YML029W QDR3P38227 689 aa3.08□□□□□ -1.92
USA1YML029W YJR015WP47090 510 aa3.08□□□□□ -1.92
USA1YML029W RIB4P50861 169 aaPredicted RBP3.08□□□□□ -1.92
USA1YML029W MIC27P50945 234 aa3.08□□□□□ -1.92
USA1YML029W DIA1P54005 336 aa3.08□□□□□ -1.92
USA1YML029W MSA1Q08471 629 aa3.08□□□□□ -1.92
USA1YML029W POP5P28005 173 aa3.08□□□□□ -1.92
USA1YML029W RIB5P38145 238 aa3.08□□□□□ -1.92
USA1YML029W YPT31P38555 223 aaKnown RBP3.08□□□□□ -1.92
USA1YML029W YIL024CP40543 189 aa3.08□□□□□ -1.92
USA1YML029W YMR007WQ03675 126 aa3.08□□□□□ -1.92
USA1YML029W AVO2Q04749 426 aa3.08□□□□□ -1.92
USA1YML029W DXO1Q06349 442 aa3.08□□□□□ -1.92
USA1YML029W POS5Q06892 414 aa3.08□□□□□ -1.92
USA1YML029W LDS2Q08218 356 aa3.08□□□□□ -1.92
USA1YML029W CYC3P06182 269 aa3.07□□□□□ -1.92
USA1YML029W ALK2P32789 676 aaPredicted RBP3.07□□□□□ -1.92
USA1YML029W YBR144CP34215 104 aa3.07□□□□□ -1.92
USA1YML029W YER085CP40058 173 aa3.07□□□□□ -1.92
USA1YML029W POR2P40478 281 aa3.07□□□□□ -1.92
USA1YML029W COX16P47081 118 aa3.07□□□□□ -1.92
USA1YML029W SWT21P53873 357 aaPredicted RBP3.07□□□□□ -1.92
USA1YML029W YHP1Q04116 353 aa3.07□□□□□ -1.92
USA1YML029W SHH3Q04487 196 aa3.07□□□□□ -1.92
USA1YML029W CTR3Q06686 241 aa3.07□□□□□ -1.92
USA1YML029W TIM18Q08749 192 aa3.07□□□□□ -1.92
USA1YML029W ERG27Q12452 347 aaKnown RBP3.07□□□□□ -1.92
USA1YML029W PIS1P06197 220 aaKnown RBP3.07□□□□□ -1.92
USA1YML029W CNB1P25296 175 aa3.07□□□□□ -1.92
USA1YML029W RPL14AP36105 138 aaKnown RBP3.07□□□□□ -1.92
USA1YML029W RPL14BP38754 138 aaKnown RBP3.07□□□□□ -1.92
USA1YML029W SNF11P38956 169 aa3.07□□□□□ -1.92
USA1YML029W YGR018CP53211 109 aa3.07□□□□□ -1.92
USA1YML029W PAU4P53427 120 aa3.07□□□□□ -1.92
USA1YML029W YPL162CQ12042 273 aa3.07□□□□□ -1.92
USA1YML029W SME1Q12330 94 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 74.4 ms