RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeastyeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CST9YLR394W YLR162WQ06235 118 aa1.62□□□□□ -2.15
CST9YLR394W YET3Q07451 203 aa1.62□□□□□ -2.15
CST9YLR394W CSI2Q08054 341 aa1.62□□□□□ -2.15
CST9YLR394W YCL012CQ8J0M4 134 aa1.62□□□□□ -2.15
CST9YLR394W GCY1P14065 312 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
CST9YLR394W YCR090CP25654 182 aaKnown RBP1.61□□□□□ -2.15
CST9YLR394W NTG1P31378 399 aa1.61□□□□□ -2.15
CST9YLR394W FZF1P32805 299 aa1.61□□□□□ -2.15
CST9YLR394W ETR1P38071 380 aa1.61□□□□□ -2.15
CST9YLR394W FMP32P43557 207 aa1.61□□□□□ -2.15
CST9YLR394W IRC18P47056 224 aa1.61□□□□□ -2.15
CST9YLR394W APS3P47064 194 aa1.61□□□□□ -2.15
CST9YLR394W EFM5P53200 248 aaKnown RBP1.61□□□□□ -2.15
CST9YLR394W BUD25P85052 153 aa1.61□□□□□ -2.15
CST9YLR394W TLG1Q03322 224 aa1.61□□□□□ -2.15
CST9YLR394W YDR249CQ03787 373 aa1.61□□□□□ -2.15
CST9YLR394W YNG1Q08465 219 aa1.61□□□□□ -2.15
CST9YLR394W YPL162CQ12042 273 aa1.61□□□□□ -2.15
CST9YLR394W YFR032C-BQ8TGU2 87 aa1.61□□□□□ -2.15
CST9YLR394W MRPS28P21771 286 aa1.6□□□□□ -2.15
CST9YLR394W RFA3P26755 122 aaKnown RBP1.6□□□□□ -2.15
CST9YLR394W YKR045CP36138 183 aa1.6□□□□□ -2.15
CST9YLR394W UMP1P38293 148 aa1.6□□□□□ -2.15
CST9YLR394W PRS3P38689 320 aaKnown RBP1.6□□□□□ -2.15
CST9YLR394W VTC1P40046 129 aaRIP-Chip data1.6□□□□□ -2.15 RIP-Chip
CST9YLR394W NCE101Q02820 53 aa1.6□□□□□ -2.15
CST9YLR394W RAF1Q06891 181 aa1.6□□□□□ -2.15
CST9YLR394W RPS1AP33442 255 aaKnown RBP1.59□□□□□ -2.15
CST9YLR394W YBR220CP38318 560 aa1.59□□□□□ -2.15
CST9YLR394W NSG1P38837 291 aa1.59□□□□□ -2.15
CST9YLR394W YIR020CP40575 100 aa1.59□□□□□ -2.15
CST9YLR394W RTR2Q12378 196 aa1.59□□□□□ -2.15
CST9YLR394W MER1P16523 270 aa1.58□□□□□ -2.16
CST9YLR394W ATP15P21306 62 aa1.58□□□□□ -2.16
CST9YLR394W YCR087C-AP37263 153 aa1.58□□□□□ -2.16
CST9YLR394W IKI1P38874 309 aa1.58□□□□□ -2.16
CST9YLR394W GVP36P40531 326 aaKnown RBP1.58□□□□□ -2.16
CST9YLR394W LSM7P53905 115 aaKnown RBP1.58□□□□□ -2.16
CST9YLR394W SED1Q01589 338 aa1.58□□□□□ -2.16
CST9YLR394W GGA1Q06336 557 aa1.58□□□□□ -2.16
CST9YLR394W YOL160WQ08321 113 aa1.58□□□□□ -2.16
CST9YLR394W FSF1Q12029 327 aaKnown RBP1.58□□□□□ -2.16
CST9YLR394W YDL180WQ12301 547 aa1.58□□□□□ -2.16
CST9YLR394W TSC3Q3E790 80 aa1.58□□□□□ -2.16
CST9YLR394W YOL162WP0CF19 215 aa1.57□□□□□ -2.16
CST9YLR394W RPL2AP0CX45 254 aaKnown RBP1.57□□□□□ -2.16
CST9YLR394W RPL2BP0CX46 254 aaKnown RBP1.57□□□□□ -2.16
CST9YLR394W KSS1P14681 368 aa1.57□□□□□ -2.16
CST9YLR394W BUB2P26448 306 aaPredicted RBP1.57□□□□□ -2.16
CST9YLR394W YKL102CP34249 101 aa1.57□□□□□ -2.16
CST9YLR394W RMD6P39975 231 aa1.57□□□□□ -2.16
CST9YLR394W RFC4P40339 323 aaKnown RBP1.57□□□□□ -2.16
CST9YLR394W RPS12P48589 143 aaKnown RBP1.57□□□□□ -2.16
CST9YLR394W CGR1P53188 120 aa1.57□□□□□ -2.16
CST9YLR394W COG5P53951 403 aa1.57□□□□□ -2.16
CST9YLR394W RPL22BP56628 122 aaKnown RBP1.57□□□□□ -2.16
CST9YLR394W FMN1Q03778 218 aa1.57□□□□□ -2.16
CST9YLR394W RIM9Q04734 239 aa1.57□□□□□ -2.16
CST9YLR394W YLR036CQ07986 203 aa1.57□□□□□ -2.16
CST9YLR394W YLR053CQ12026 108 aa1.57□□□□□ -2.16
CST9YLR394W GET4Q12125 312 aa1.57□□□□□ -2.16
CST9YLR394W NMT1P14743 455 aa1.57□□□□□ -2.16
CST9YLR394W RPB3P16370 318 aaKnown RBP1.57□□□□□ -2.16
CST9YLR394W YGL010WP25338 174 aa1.57□□□□□ -2.16
CST9YLR394W PTC1P35182 281 aa1.57□□□□□ -2.16
CST9YLR394W UPS2P35200 230 aa1.57□□□□□ -2.16
CST9YLR394W BNA7Q04066 261 aa1.57□□□□□ -2.16
CST9YLR394W YKL018C-AQ3E7A7 99 aa1.57□□□□□ -2.16
CST9YLR394W APA2P22108 325 aa1.56□□□□□ -2.16
CST9YLR394W SKG1P36169 355 aa1.56□□□□□ -2.16
CST9YLR394W VMA22P38784 181 aa1.56□□□□□ -2.16
CST9YLR394W YER121WP40076 114 aa1.56□□□□□ -2.16
CST9YLR394W SIP18P50263 79 aa1.56□□□□□ -2.16
CST9YLR394W SBH2P52871 88 aa1.56□□□□□ -2.16
CST9YLR394W POP3P53833 195 aaPredicted RBP1.56□□□□□ -2.16
CST9YLR394W YDR274CP87283 123 aa1.56□□□□□ -2.16
CST9YLR394W RCE1Q03530 315 aa1.56□□□□□ -2.16
CST9YLR394W YOL131WQ08270 108 aa1.56□□□□□ -2.16
CST9YLR394W YPR202WQ08993 238 aa1.56□□□□□ -2.16
CST9YLR394W ADF1Q2V2Q1 113 aa1.56□□□□□ -2.16
CST9YLR394W HTB1P02293 131 aaKnown RBP1.55□□□□□ -2.16
CST9YLR394W HTB2P02294 131 aa1.55□□□□□ -2.16
CST9YLR394W RPL35AP0CX84 120 aaKnown RBP1.55□□□□□ -2.16
CST9YLR394W RPL35BP0CX85 120 aaKnown RBP1.55□□□□□ -2.16
CST9YLR394W BET1P22804 142 aa1.55□□□□□ -2.16
CST9YLR394W LHP1P33399 275 aaKnown RBP1.55□□□□□ -2.16
CST9YLR394W CAF4P36130 643 aa1.55□□□□□ -2.16
CST9YLR394W SMX2P40204 77 aaKnown RBP1.55□□□□□ -2.16
CST9YLR394W GLR1P41921 483 aaKnown RBP1.55□□□□□ -2.16
CST9YLR394W PAC10P48363 199 aa1.55□□□□□ -2.16
CST9YLR394W NOP19P53317 196 aaPredicted RBP1.55□□□□□ -2.16
CST9YLR394W NUP49Q02199 472 aa1.55□□□□□ -2.16
CST9YLR394W FIT3Q08907 204 aa1.55□□□□□ -2.16
CST9YLR394W UIP4Q08926 304 aa1.55□□□□□ -2.16
CST9YLR394W GRE1Q08969 168 aa1.55□□□□□ -2.16
CST9YLR394W RIO1Q12196 484 aaKnown RBP1.55□□□□□ -2.16
CST9YLR394W YCL048W-AQ2V2Q2 79 aa1.55□□□□□ -2.16
CST9YLR394W SNC2P33328 115 aa1.54□□□□□ -2.16
CST9YLR394W CUS2P53830 285 aaPredicted RBP1.54□□□□□ -2.16
CST9YLR394W YDR102CQ03864 110 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 513.1 ms