RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	UPS3	Q04006	179 aa		0.76	□□□□□ -2.29
YCS4	YLR272C	AKR2	Q12013	749 aa		0.76	□□□□□ -2.29
YCS4	YLR272C	RAD28	Q12021	506 aa		0.76	□□□□□ -2.29
YCS4	YLR272C	NHP6A	P11632	93 aa	Known RBP	0.76	□□□□□ -2.29
YCS4	YLR272C	PEX4	P29340	183 aa		0.76	□□□□□ -2.29
YCS4	YLR272C	SUI1	P32911	108 aa	Known RBP	0.76	□□□□□ -2.29
YCS4	YLR272C	YKR041W	P36134	250 aa		0.76	□□□□□ -2.29
YCS4	YLR272C	ERG10	P41338	398 aa	Known RBP	0.76	□□□□□ -2.29
YCS4	YLR272C	YGL088W	P53151	121 aa		0.76	□□□□□ -2.29
YCS4	YLR272C	SLO1	Q3E784	85 aa		0.76	□□□□□ -2.29
YCS4	YLR272C	PMD1	P32634	1753 aa		0.76	□□□□□ -2.29
YCS4	YLR272C	GSP2	P32836	220 aa	Known RBP	0.76	□□□□□ -2.29
YCS4	YLR272C	HTD2	P38790	280 aa	Known RBP	0.76	□□□□□ -2.29
YCS4	YLR272C	CTR2	P38865	189 aa		0.76	□□□□□ -2.29
YCS4	YLR272C	YJL144W	P47009	104 aa		0.76	□□□□□ -2.29
YCS4	YLR272C	RCE1	Q03530	315 aa		0.76	□□□□□ -2.29
YCS4	YLR272C	THI74	Q04083	370 aa		0.76	□□□□□ -2.29
YCS4	YLR272C	RFU1	Q08003	200 aa		0.76	□□□□□ -2.29
YCS4	YLR272C	EFG1	Q3E705	233 aa	Known RBP	0.76	□□□□□ -2.29
YCS4	YLR272C	YJL197C-A	P0C5P0	93 aa		0.75	□□□□□ -2.29
YCS4	YLR272C	RPL30	P14120	105 aa	Known RBP	0.75	□□□□□ -2.29
YCS4	YLR272C	AHC2	P25649	128 aa		0.75	□□□□□ -2.29
YCS4	YLR272C	RPF1	P38805	295 aa	Known RBP	0.75	□□□□□ -2.29
YCS4	YLR272C	NVJ1	P38881	321 aa		0.75	□□□□□ -2.29
YCS4	YLR272C	YER084W	P40057	128 aa		0.75	□□□□□ -2.29
YCS4	YLR272C	DAS2	Q12084	232 aa		0.75	□□□□□ -2.29
YCS4	YLR272C	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.75	□□□□□ -2.29
YCS4	YLR272C	MDM35	O60200	86 aa		0.75	□□□□□ -2.29
YCS4	YLR272C	MAK31	P23059	88 aa		0.75	□□□□□ -2.29
YCS4	YLR272C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.75	□□□□□ -2.29	not detected
YCS4	YLR272C	CSH1	P38287	376 aa		0.75	□□□□□ -2.29
YCS4	YLR272C	YNL217W	P40152	326 aa		0.75	□□□□□ -2.29
YCS4	YLR272C	YGL101W	P53144	215 aa		0.75	□□□□□ -2.29
YCS4	YLR272C	GEP7	P53171	287 aa		0.75	□□□□□ -2.29
YCS4	YLR272C	YLR050C	Q12155	161 aa	Known RBP	0.75	□□□□□ -2.29
YCS4	YLR272C	MYO1	P08964	1928 aa		0.75	□□□□□ -2.29
YCS4	YLR272C	YKR045C	P36138	183 aa		0.75	□□□□□ -2.29
YCS4	YLR272C	RCF2	P53721	224 aa		0.75	□□□□□ -2.29
YCS4	YLR272C	PHO13	P19881	312 aa		0.74	□□□□□ -2.29
YCS4	YLR272C	SNC2	P33328	115 aa		0.74	□□□□□ -2.29
YCS4	YLR272C	ERV15	P38312	142 aa		0.74	□□□□□ -2.29
YCS4	YLR272C	YER134C	P40081	178 aa		0.74	□□□□□ -2.29
YCS4	YLR272C	JAC1	P53193	184 aa		0.74	□□□□□ -2.29
YCS4	YLR272C	NQM1	P53228	333 aa	Predicted RBP	0.74	□□□□□ -2.29
YCS4	YLR272C	LSM3	P57743	89 aa	Known RBP	0.74	□□□□□ -2.29
YCS4	YLR272C	YKR005C	Q02203	525 aa		0.74	□□□□□ -2.29
YCS4	YLR272C	YLR053C	Q12026	108 aa		0.74	□□□□□ -2.29
YCS4	YLR272C	YPR013C	Q12145	317 aa		0.74	□□□□□ -2.29
YCS4	YLR272C	TVP38	P36164	337 aa		0.74	□□□□□ -2.29
YCS4	YLR272C	NSG1	P38837	291 aa		0.74	□□□□□ -2.29
YCS4	YLR272C	GAT4	P40569	121 aa		0.74	□□□□□ -2.29
YCS4	YLR272C	GPI2	P46961	280 aa		0.74	□□□□□ -2.29
YCS4	YLR272C	YGR164W	P53291	111 aa		0.74	□□□□□ -2.29
YCS4	YLR272C	LIP1	Q03579	150 aa		0.74	□□□□□ -2.29
YCS4	YLR272C	FEX1	Q08913	375 aa		0.74	□□□□□ -2.29
YCS4	YLR272C	FEX2	Q08991	375 aa		0.74	□□□□□ -2.29
YCS4	YLR272C	SPC3	Q12133	184 aa		0.74	□□□□□ -2.29
YCS4	YLR272C	GTT2	Q12390	233 aa		0.74	□□□□□ -2.29
YCS4	YLR272C	RPO26	P20435	155 aa		0.73	□□□□□ -2.29
YCS4	YLR272C	SEC17	P32602	292 aa		0.73	□□□□□ -2.29
YCS4	YLR272C	CPR5	P35176	225 aa		0.73	□□□□□ -2.29
YCS4	YLR272C	MRPL17	P36528	281 aa		0.73	□□□□□ -2.29
YCS4	YLR272C	GAA1	P39012	614 aa		0.73	□□□□□ -2.29
YCS4	YLR272C	SML1	Q04964	104 aa		0.73	□□□□□ -2.29
YCS4	YLR272C	LSM1	P47017	172 aa	Known RBP	0.73	□□□□□ -2.29
YCS4	YLR272C	EST3	Q03096	181 aa		0.73	□□□□□ -2.29
YCS4	YLR272C	GPI17	Q04080	534 aa		0.73	□□□□□ -2.29
YCS4	YLR272C	LOA1	Q06508	300 aa		0.73	□□□□□ -2.29
YCS4	YLR272C	YHR007C-A	Q07074	71 aa		0.73	□□□□□ -2.29
YCS4	YLR272C	HAP2	P06774	265 aa		0.73	□□□□□ -2.29
YCS4	YLR272C	RPB3	P16370	318 aa	Known RBP	0.73	□□□□□ -2.29
YCS4	YLR272C	CCC1	P47818	322 aa		0.73	□□□□□ -2.29
YCS4	YLR272C	RRT7	Q07829	113 aa		0.73	□□□□□ -2.29
YCS4	YLR272C	MCP1	Q12106	302 aa		0.73	□□□□□ -2.29
YCS4	YLR272C	DGK1	Q12382	290 aa		0.73	□□□□□ -2.29
YCS4	YLR272C	STF2	P16965	84 aa		0.72	□□□□□ -2.29
YCS4	YLR272C	YCL042W	P25572	119 aa		0.72	□□□□□ -2.29
YCS4	YLR272C	UTR5	P32630	166 aa		0.72	□□□□□ -2.29
YCS4	YLR272C	YHR022C	P38763	256 aa		0.72	□□□□□ -2.29
YCS4	YLR272C	GVP36	P40531	326 aa	Known RBP	0.72	□□□□□ -2.29
YCS4	YLR272C	TIM8	P57744	87 aa		0.72	□□□□□ -2.29
YCS4	YLR272C	YPR153W	Q06537	140 aa		0.72	□□□□□ -2.29
YCS4	YLR272C	FIT2	Q08906	153 aa		0.72	□□□□□ -2.29
YCS4	YLR272C	MGT1	P26188	188 aa		0.72	□□□□□ -2.29
YCS4	YLR272C	PHO88	P38264	188 aa	Predicted RBP	0.72	□□□□□ -2.29
YCS4	YLR272C	SPC25	P40014	221 aa		0.72	□□□□□ -2.29
YCS4	YLR272C	NEJ1	Q06148	342 aa		0.72	□□□□□ -2.29
YCS4	YLR272C	KEI1	Q06346	221 aa		0.72	□□□□□ -2.29
YCS4	YLR272C	NOT5	Q12514	560 aa	Predicted RBP	0.72	□□□□□ -2.29
YCS4	YLR272C	YIR021W-A	Q3E739	70 aa		0.72	□□□□□ -2.29
YCS4	YLR272C	GPA2	P10823	449 aa		0.72	□□□□□ -2.29
YCS4	YLR272C	GSP1	P32835	219 aa	Known RBP	0.72	□□□□□ -2.29
YCS4	YLR272C	SHB17	P36136	271 aa	Known RBP	0.72	□□□□□ -2.29
YCS4	YLR272C	ECM31	P38122	312 aa		0.72	□□□□□ -2.29
YCS4	YLR272C	YHR180W	P38868	163 aa		0.72	□□□□□ -2.29
YCS4	YLR272C	BUD25	P85052	153 aa		0.72	□□□□□ -2.29
YCS4	YLR272C	YPR174C	Q06616	221 aa	Predicted RBP	0.72	□□□□□ -2.29
YCS4	YLR272C	VAM10	Q08474	114 aa		0.72	□□□□□ -2.29
YCS4	YLR272C	JIP3	O13555	125 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	ATP15	P21306	62 aa		0.71	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms