RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W VMA11P32842 164 aa1.55□□□□□ -2.16
SSF1YHR066W MRPL17P36528 281 aa1.55□□□□□ -2.16
SSF1YHR066W OPY1P38271 328 aa1.55□□□□□ -2.16
SSF1YHR066W POP7P38291 140 aa1.55□□□□□ -2.16
SSF1YHR066W AIM2P39721 246 aa1.55□□□□□ -2.16
SSF1YHR066W YEA4P40004 342 aa1.55□□□□□ -2.16
SSF1YHR066W RFC2P40348 353 aa1.55□□□□□ -2.16
SSF1YHR066W GPI14P47088 403 aaKnown RBP1.55□□□□□ -2.16
SSF1YHR066W DAN1P47178 298 aa1.55□□□□□ -2.16
SSF1YHR066W YGL101WP53144 215 aa1.55□□□□□ -2.16
SSF1YHR066W SLM2P53955 656 aa1.55□□□□□ -2.16
SSF1YHR066W SPG3Q04398 127 aaPredicted RBP1.55□□□□□ -2.16
SSF1YHR066W YPR202WQ08993 238 aa1.55□□□□□ -2.16
SSF1YHR066W DAS2Q12084 232 aa1.55□□□□□ -2.16
SSF1YHR066W YDL180WQ12301 547 aa1.55□□□□□ -2.16
SSF1YHR066W DGK1Q12382 290 aa1.55□□□□□ -2.16
SSF1YHR066W TSC3Q3E790 80 aa1.55□□□□□ -2.16
SSF1YHR066W MSW1P04803 379 aa1.54□□□□□ -2.16
SSF1YHR066W UBI4P0CG63 381 aaKnown RBP1.54□□□□□ -2.16
SSF1YHR066W NUF2P33895 451 aa1.54□□□□□ -2.16
SSF1YHR066W UPS2P35200 230 aa1.54□□□□□ -2.16
SSF1YHR066W CSH1P38287 376 aa1.54□□□□□ -2.16
SSF1YHR066W AVT2P39981 480 aa1.54□□□□□ -2.16
SSF1YHR066W GVP36P40531 326 aaKnown RBP1.54□□□□□ -2.16
SSF1YHR066W TTI2P47168 421 aa1.54□□□□□ -2.16
SSF1YHR066W AIF1P52923 378 aa1.54□□□□□ -2.16
SSF1YHR066W TMA20P89886 181 aaPredicted RBP1.54□□□□□ -2.16
SSF1YHR066W YDR476CQ03362 224 aa1.54□□□□□ -2.16
SSF1YHR066W NAT3Q06504 195 aa1.54□□□□□ -2.16
SSF1YHR066W YOL014WQ08110 124 aa1.54□□□□□ -2.16
SSF1YHR066W YOR342CQ12182 319 aa1.54□□□□□ -2.16
SSF1YHR066W YML100W-AQ8TGT0 57 aa1.54□□□□□ -2.16
SSF1YHR066W FAS1P07149 2051 aaKnown RBP1.54□□□□□ -2.16
SSF1YHR066W RPL2AP0CX45 254 aaKnown RBP1.53□□□□□ -2.16
SSF1YHR066W RPL2BP0CX46 254 aaKnown RBP1.53□□□□□ -2.16
SSF1YHR066W SCM4P32564 187 aa1.53□□□□□ -2.16
SSF1YHR066W IPI1P38803 334 aaPredicted RBP1.53□□□□□ -2.16
SSF1YHR066W NSG1P38837 291 aa1.53□□□□□ -2.16
SSF1YHR066W YHR180WP38868 163 aa1.53□□□□□ -2.16
SSF1YHR066W YER134CP40081 178 aa1.53□□□□□ -2.16
SSF1YHR066W YFL019CP43576 117 aa1.53□□□□□ -2.16
SSF1YHR066W XPT1P47165 209 aa1.53□□□□□ -2.16
SSF1YHR066W ORM1P53224 222 aa1.53□□□□□ -2.16
SSF1YHR066W YDR274CP87283 123 aa1.53□□□□□ -2.16
SSF1YHR066W PKR1Q03880 122 aaKnown RBP1.53□□□□□ -2.16
SSF1YHR066W THI74Q04083 370 aa1.53□□□□□ -2.16
SSF1YHR066W CSF1Q12150 2958 aa1.53□□□□□ -2.16
SSF1YHR066W YLR412C-AQ3E742 68 aa1.53□□□□□ -2.16
SSF1YHR066W ODC2Q99297 307 aa1.53□□□□□ -2.16
SSF1YHR066W YAR023CD6VPM8 179 aa1.52□□□□□ -2.17
SSF1YHR066W PBI2P0CT04 75 aaKnown RBP1.52□□□□□ -2.17
SSF1YHR066W IDP1P21954 428 aaKnown RBP1.52□□□□□ -2.17
SSF1YHR066W PEX34P25584 144 aa1.52□□□□□ -2.17
SSF1YHR066W PAN3P36102 679 aaPredicted RBP1.52□□□□□ -2.17
SSF1YHR066W UMP1P38293 148 aa1.52□□□□□ -2.17
SSF1YHR066W YHL026CP38740 315 aa1.52□□□□□ -2.17
SSF1YHR066W GIM4P40005 111 aaKnown RBP1.52□□□□□ -2.17
SSF1YHR066W FCY21P40039 528 aa1.52□□□□□ -2.17
SSF1YHR066W VTC1P40046 129 aaRIP-Chip data1.52□□□□□ -2.17not detected
SSF1YHR066W YNL200CP40165 246 aaKnown RBP1.52□□□□□ -2.17
SSF1YHR066W APQ12P40532 138 aa1.52□□□□□ -2.17
SSF1YHR066W DOC1P53068 250 aa1.52□□□□□ -2.17
SSF1YHR066W LSM3P57743 89 aaKnown RBP1.52□□□□□ -2.17
SSF1YHR066W NEJ1Q06148 342 aa1.52□□□□□ -2.17
SSF1YHR066W POR1P04840 283 aaKnown RBP1.51□□□□□ -2.17
SSF1YHR066W CPA1P07258 411 aaKnown RBP1.51□□□□□ -2.17
SSF1YHR066W CPR5P35176 225 aa1.51□□□□□ -2.17
SSF1YHR066W SFK1P35735 353 aa1.51□□□□□ -2.17
SSF1YHR066W CYC2P38909 366 aa1.51□□□□□ -2.17
SSF1YHR066W PGD1P40356 397 aa1.51□□□□□ -2.17
SSF1YHR066W DLS1P40366 167 aa1.51□□□□□ -2.17
SSF1YHR066W YGR042WP53227 271 aa1.51□□□□□ -2.17
SSF1YHR066W YMR099CQ03161 297 aaKnown RBP1.51□□□□□ -2.17
SSF1YHR066W VPS71Q03433 280 aa1.51□□□□□ -2.17
SSF1YHR066W RAV2Q03956 351 aa1.51□□□□□ -2.17
SSF1YHR066W TRA1P38811 3744 aa1.51□□□□□ -2.17
SSF1YHR066W STP22P25604 385 aa1.5□□□□□ -2.17
SSF1YHR066W SNC2P33328 115 aa1.5□□□□□ -2.17
SSF1YHR066W NRG2P38082 220 aa1.5□□□□□ -2.17
SSF1YHR066W YBR285WP38354 144 aa1.5□□□□□ -2.17
SSF1YHR066W FYV4P38783 130 aaPredicted RBP1.5□□□□□ -2.17
SSF1YHR066W YGR201CP42936 225 aa1.5□□□□□ -2.17
SSF1YHR066W RBL2P48606 106 aaKnown RBP1.5□□□□□ -2.17
SSF1YHR066W YGL204CP53089 101 aa1.5□□□□□ -2.17
SSF1YHR066W MPC3P53311 146 aa1.5□□□□□ -2.17
SSF1YHR066W YNR062CP53748 327 aa1.5□□□□□ -2.17
SSF1YHR066W YMR320WQ04897 101 aa1.5□□□□□ -2.17
SSF1YHR066W FYV12Q08559 129 aa1.5□□□□□ -2.17
SSF1YHR066W FSF1Q12029 327 aaKnown RBP1.5□□□□□ -2.17
SSF1YHR066W ATO3Q12359 275 aa1.5□□□□□ -2.17
SSF1YHR066W TIR1P10863 254 aa1.49□□□□□ -2.17
SSF1YHR066W RPL30P14120 105 aaKnown RBP1.49□□□□□ -2.17
SSF1YHR066W ERJ5P43613 295 aaPredicted RBP1.49□□□□□ -2.17
SSF1YHR066W YJL027CP47063 138 aaPredicted RBP1.49□□□□□ -2.17
SSF1YHR066W YJR015WP47090 510 aa1.49□□□□□ -2.17
SSF1YHR066W YGR219WP53307 113 aa1.49□□□□□ -2.17
SSF1YHR066W HHT1P61830 136 aa1.49□□□□□ -2.17
SSF1YHR066W CSN9Q03981 162 aa1.49□□□□□ -2.17
SSF1YHR066W GAL83Q04739 417 aa1.49□□□□□ -2.17
SSF1YHR066W EMC6Q12431 108 aa1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 51.2 ms