RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C FIT1Q04433 528 aa0.65□□□□□ -2.31
SMB1YER029C AVO2Q04749 426 aa0.65□□□□□ -2.31
SMB1YER029C TRM3Q07527 1436 aa0.64□□□□□ -2.31
SMB1YER029C RAD6P06104 172 aa0.64□□□□□ -2.31
SMB1YER029C MAK31P23059 88 aa0.64□□□□□ -2.31
SMB1YER029C RAD51P25454 400 aa0.64□□□□□ -2.31
SMB1YER029C EGD2P38879 174 aaKnown RBP0.64□□□□□ -2.31
SMB1YER029C MOB1P40484 314 aa0.64□□□□□ -2.31
SMB1YER029C GRX5Q02784 150 aa0.64□□□□□ -2.31
SMB1YER029C RPL35AP0CX84 120 aaKnown RBP0.63□□□□□ -2.31
SMB1YER029C RPL35BP0CX85 120 aaKnown RBP0.63□□□□□ -2.31
SMB1YER029C YRA2P36036 203 aaKnown RBP RIP-Chip data0.63□□□□□ -2.31not detected
SMB1YER029C YEL028WP39989 153 aa0.63□□□□□ -2.31
SMB1YER029C THI74Q04083 370 aa0.63□□□□□ -2.31
SMB1YER029C YLR050CQ12155 161 aaKnown RBP0.63□□□□□ -2.31
SMB1YER029C CMC2Q3E7A4 109 aa0.63□□□□□ -2.31
SMB1YER029C ARC19P33204 171 aaKnown RBP0.62□□□□□ -2.31
SMB1YER029C YEL073CP39974 107 aa0.62□□□□□ -2.31
SMB1YER029C GLR1P41921 483 aaKnown RBP0.62□□□□□ -2.31
SMB1YER029C HSK3P69852 69 aa0.62□□□□□ -2.31
SMB1YER029C SYM1Q06563 197 aa0.62□□□□□ -2.31
SMB1YER029C HRD1Q08109 551 aa0.62□□□□□ -2.31
SMB1YER029C YDL157CQ12082 118 aa0.62□□□□□ -2.31
SMB1YER029C PTC1P35182 281 aa0.61□□□□□ -2.31
SMB1YER029C VPS51P36116 164 aa0.61□□□□□ -2.31
SMB1YER029C YAR064WP39563 99 aa0.61□□□□□ -2.31
SMB1YER029C YGR269WP40326 108 aa0.61□□□□□ -2.31
SMB1YER029C XPT1P47165 209 aa0.61□□□□□ -2.31
SMB1YER029C YNL140CP53910 189 aa0.61□□□□□ -2.31
SMB1YER029C PLP1Q04004 230 aa0.61□□□□□ -2.31
SMB1YER029C SMD2Q06217 110 aaKnown RBP0.61□□□□□ -2.31
SMB1YER029C CMD1P06787 147 aaKnown RBP0.6□□□□□ -2.31
SMB1YER029C NUF2P33895 451 aa0.6□□□□□ -2.31
SMB1YER029C SHB17P36136 271 aaKnown RBP0.6□□□□□ -2.31
SMB1YER029C FES1P38260 290 aa0.6□□□□□ -2.31
SMB1YER029C PAC10P48363 199 aa0.6□□□□□ -2.31
SMB1YER029C EFM5P53200 248 aaKnown RBP0.6□□□□□ -2.31
SMB1YER029C NQM1P53228 333 aaPredicted RBP0.6□□□□□ -2.31
SMB1YER029C LIP1Q03579 150 aa0.6□□□□□ -2.31
SMB1YER029C YML079WQ03629 201 aa0.6□□□□□ -2.31
SMB1YER029C GIM5Q04493 163 aa0.6□□□□□ -2.31
SMB1YER029C LAA1P39526 2014 aa0.59□□□□□ -2.31
SMB1YER029C UGX2P32772 223 aa0.59□□□□□ -2.31
SMB1YER029C UBC6P33296 250 aaPredicted RBP0.59□□□□□ -2.31
SMB1YER029C YKR070WP36151 352 aaKnown RBP0.59□□□□□ -2.31
SMB1YER029C YER121WP40076 114 aa0.59□□□□□ -2.31
SMB1YER029C DCV1P43595 202 aa0.59□□□□□ -2.31
SMB1YER029C YDL241WQ07738 123 aa0.59□□□□□ -2.31
SMB1YER029C CCW12Q12127 133 aa0.59□□□□□ -2.31
SMB1YER029C SPA2P23201 1466 aaKnown RBP0.59□□□□□ -2.32
SMB1YER029C TAF2P23255 1407 aa0.58□□□□□ -2.32
SMB1YER029C SPS2P08459 502 aa0.58□□□□□ -2.32
SMB1YER029C YIL102CP40488 101 aa0.58□□□□□ -2.32
SMB1YER029C YGL230CP53074 147 aa0.58□□□□□ -2.32
SMB1YER029C TMA20P89886 181 aaPredicted RBP0.58□□□□□ -2.32
SMB1YER029C UIP4Q08926 304 aa0.58□□□□□ -2.32
SMB1YER029C FCY1Q12178 158 aa0.58□□□□□ -2.32
SMB1YER029C GSC2P40989 1895 aa0.57□□□□□ -2.32
SMB1YER029C QCR2P07257 368 aa0.57□□□□□ -2.32
SMB1YER029C RPS25BP0C0T4 108 aaKnown RBP0.57□□□□□ -2.32
SMB1YER029C PRE1P22141 198 aaKnown RBP0.57□□□□□ -2.32
SMB1YER029C RME1P32338 300 aaKnown RBP0.57□□□□□ -2.32
SMB1YER029C AME1P38313 324 aa0.57□□□□□ -2.32
SMB1YER029C YJR015WP47090 510 aa0.57□□□□□ -2.32
SMB1YER029C YPR114WQ06107 315 aa0.57□□□□□ -2.32
SMB1YER029C YLR053CQ12026 108 aa0.57□□□□□ -2.32
SMB1YER029C NSL1Q12143 216 aa0.57□□□□□ -2.32
SMB1YER029C YLR046CQ12253 270 aa0.57□□□□□ -2.32
SMB1YER029C RPS25AQ3E792 108 aaPredicted RBP0.57□□□□□ -2.32
SMB1YER029C KIN28P06242 306 aa0.56□□□□□ -2.32
SMB1YER029C ATP5P09457 212 aa0.56□□□□□ -2.32
SMB1YER029C INO4P13902 151 aa0.56□□□□□ -2.32
SMB1YER029C ACP1P32463 125 aa0.56□□□□□ -2.32
SMB1YER029C FIG1P38224 298 aa0.56□□□□□ -2.32
SMB1YER029C LSM1P47017 172 aaKnown RBP0.56□□□□□ -2.32
SMB1YER029C CCC1P47818 322 aa0.56□□□□□ -2.32
SMB1YER029C YGL101WP53144 215 aa0.56□□□□□ -2.32
SMB1YER029C GEP7P53171 287 aa0.56□□□□□ -2.32
SMB1YER029C ORM1P53224 222 aa0.56□□□□□ -2.32
SMB1YER029C YNR064CP53750 290 aa0.56□□□□□ -2.32
SMB1YER029C KEI1Q06346 221 aa0.56□□□□□ -2.32
SMB1YER029C ATG10Q07879 167 aa0.56□□□□□ -2.32
SMB1YER029C EFG1Q3E705 233 aaKnown RBP0.56□□□□□ -2.32
SMB1YER029C CMC4Q3E7A9 73 aa0.56□□□□□ -2.32
SMB1YER029C PET20Q99373 253 aa0.56□□□□□ -2.32
SMB1YER029C YOR1P53049 1477 aa0.55□□□□□ -2.32
SMB1YER029C FMP49A0A023PZB3 126 aa0.55□□□□□ -2.32
SMB1YER029C SPT14P32363 452 aa0.55□□□□□ -2.32
SMB1YER029C SRP102P36057 244 aaPredicted RBP0.55□□□□□ -2.32
SMB1YER029C DER1P38307 211 aa0.55□□□□□ -2.32
SMB1YER029C SLM6P38343 150 aa0.55□□□□□ -2.32
SMB1YER029C YPT31P38555 223 aaKnown RBP0.55□□□□□ -2.32
SMB1YER029C MOG1P47123 218 aa0.55□□□□□ -2.32
SMB1YER029C LSM3P57743 89 aaKnown RBP0.55□□□□□ -2.32
SMB1YER029C YDC1Q02896 317 aa0.55□□□□□ -2.32
SMB1YER029C MAK3Q03503 176 aa0.55□□□□□ -2.32
SMB1YER029C RDI1Q12434 202 aa0.55□□□□□ -2.32
SMB1YER029C ADE6P38972 1358 aaKnown RBP0.55□□□□□ -2.32
SMB1YER029C YOL013W-AP0C272 63 aaPredicted RBP0.54□□□□□ -2.32
SMB1YER029C UBI4P0CG63 381 aaKnown RBP0.54□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms