RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS72	YDR485C	VPS28	Q02767	242 aa		4.2	□□□□□ -1.74
VPS72	YDR485C	MRPS8	Q03799	155 aa		4.2	□□□□□ -1.74
VPS72	YDR485C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
VPS72	YDR485C	YER135C	P40082	130 aa		4.19	□□□□□ -1.74
VPS72	YDR485C	GEP7	P53171	287 aa		4.19	□□□□□ -1.74
VPS72	YDR485C	YDR391C	Q04170	232 aa		4.19	□□□□□ -1.74
VPS72	YDR485C	YMR253C	Q04835	414 aa		4.19	□□□□□ -1.74
VPS72	YDR485C	TMC1	Q08422	150 aa	Predicted RBP	4.19	□□□□□ -1.74
VPS72	YDR485C	FAS1	P07149	2051 aa	Known RBP	4.19	□□□□□ -1.74
VPS72	YDR485C	MSW1	P04803	379 aa		4.18	□□□□□ -1.74
VPS72	YDR485C	RAD6	P06104	172 aa		4.18	□□□□□ -1.74
VPS72	YDR485C	YER039C-A	P0CD97	72 aa		4.18	□□□□□ -1.74
VPS72	YDR485C	YNR077C	P53758	84 aa		4.18	□□□□□ -1.74
VPS72	YDR485C	AIM11	P87275	137 aa		4.18	□□□□□ -1.74
VPS72	YDR485C	YTH1	Q06102	208 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS72	YDR485C	PAM17	P36147	197 aa		4.18	□□□□□ -1.74
VPS72	YDR485C	YPR063C	Q12160	140 aa		4.18	□□□□□ -1.74
VPS72	YDR485C	BUD4	P47136	1447 aa		4.17	□□□□□ -1.74
VPS72	YDR485C	YKR032W	P36127	104 aa		4.17	□□□□□ -1.74
VPS72	YDR485C	CUP9	P41817	306 aa		4.17	□□□□□ -1.74
VPS72	YDR485C	YLR042C	Q07990	161 aa		4.17	□□□□□ -1.74
VPS72	YDR485C	YOL162W	P0CF19	215 aa		4.17	□□□□□ -1.74
VPS72	YDR485C	ETR1	P38071	380 aa		4.17	□□□□□ -1.74
VPS72	YDR485C	YER084W	P40057	128 aa		4.17	□□□□□ -1.74
VPS72	YDR485C	SAE3	P89114	91 aa		4.17	□□□□□ -1.74
VPS72	YDR485C	YOR381W-A	Q3E804	55 aa		4.17	□□□□□ -1.74
VPS72	YDR485C	HSL1	P34244	1518 aa		4.17	□□□□□ -1.74
VPS72	YDR485C	TRM3	Q07527	1436 aa		4.16	□□□□□ -1.74
VPS72	YDR485C	NOP1	P15646	327 aa	Known RBP	4.16	□□□□□ -1.74
VPS72	YDR485C	YEL045C	P32616	141 aa		4.16	□□□□□ -1.74
VPS72	YDR485C	FZF1	P32805	299 aa		4.16	□□□□□ -1.74
VPS72	YDR485C	SHH3	Q04487	196 aa		4.16	□□□□□ -1.74
VPS72	YDR485C	RNH202	Q05635	350 aa		4.16	□□□□□ -1.74
VPS72	YDR485C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
VPS72	YDR485C	RPS12	P48589	143 aa	Known RBP	4.16	□□□□□ -1.74
VPS72	YDR485C	ELC1	Q03071	99 aa		4.16	□□□□□ -1.74
VPS72	YDR485C	CWC27	Q02770	301 aa		4.15	□□□□□ -1.75
VPS72	YDR485C	YMR295C	Q03559	197 aa		4.15	□□□□□ -1.75
VPS72	YDR485C	YLR422W	Q06409	1932 aa		4.15	□□□□□ -1.75
VPS72	YDR485C	UTH1	P36135	365 aa		4.14	□□□□□ -1.75
VPS72	YDR485C	YEL073C	P39974	107 aa		4.14	□□□□□ -1.75
VPS72	YDR485C	YJL027C	P47063	138 aa	Predicted RBP	4.14	□□□□□ -1.75
VPS72	YDR485C	YNR064C	P53750	290 aa		4.14	□□□□□ -1.75
VPS72	YDR485C	RIM9	Q04734	239 aa		4.14	□□□□□ -1.75
VPS72	YDR485C	SPS2	P08459	502 aa		4.13	□□□□□ -1.75
VPS72	YDR485C	YNL217W	P40152	326 aa		4.13	□□□□□ -1.75
VPS72	YDR485C	MPM1	P40364	252 aa		4.13	□□□□□ -1.75
VPS72	YDR485C	PHS1	P40857	217 aa		4.13	□□□□□ -1.75
VPS72	YDR485C	EMC4	P53073	190 aa		4.13	□□□□□ -1.75
VPS72	YDR485C	CSI2	Q08054	341 aa		4.13	□□□□□ -1.75
VPS72	YDR485C	HUT1	Q12520	339 aa		4.13	□□□□□ -1.75
VPS72	YDR485C	YPT31	P38555	223 aa	Known RBP	4.12	□□□□□ -1.75
VPS72	YDR485C	GAT4	P40569	121 aa		4.12	□□□□□ -1.75
VPS72	YDR485C	YFL012W	P43580	148 aa		4.12	□□□□□ -1.75
VPS72	YDR485C	IRC23	Q08416	157 aa		4.12	□□□□□ -1.75
VPS72	YDR485C	RPS23A	P0CX29	145 aa	Known RBP	4.12	□□□□□ -1.75
VPS72	YDR485C	RPS23B	P0CX30	145 aa		4.12	□□□□□ -1.75
VPS72	YDR485C	YCR050C	P25630	102 aa		4.12	□□□□□ -1.75
VPS72	YDR485C	LIP1	Q03579	150 aa		4.12	□□□□□ -1.75
VPS72	YDR485C	FCF2	Q12035	217 aa	Predicted RBP	4.12	□□□□□ -1.75
VPS72	YDR485C	SPP41	P38904	1435 aa		4.12	□□□□□ -1.75
VPS72	YDR485C	RPB11	P38902	120 aa		4.11	□□□□□ -1.75
VPS72	YDR485C	TVP23	P38962	199 aa		4.11	□□□□□ -1.75
VPS72	YDR485C	YOR376W-A	Q3E805	51 aa		4.11	□□□□□ -1.75
VPS72	YDR485C	MDH2	P22133	377 aa		4.11	□□□□□ -1.75
VPS72	YDR485C	RIO2	P40160	425 aa	Known RBP	4.11	□□□□□ -1.75
VPS72	YDR485C	YMR252C	Q04814	134 aa		4.11	□□□□□ -1.75
VPS72	YDR485C	YCL001W-B	Q96VH2	84 aa		4.11	□□□□□ -1.75
VPS72	YDR485C	DDP1	Q99321	188 aa	Known RBP	4.11	□□□□□ -1.75
VPS72	YDR485C	VAR1	P02381	398 aa		4.1	□□□□□ -1.75
VPS72	YDR485C	ATG10	Q07879	167 aa		4.1	□□□□□ -1.75
VPS72	YDR485C	YOR015W	Q12169	119 aa		4.1	□□□□□ -1.75
VPS72	YDR485C	MIG1	P27705	504 aa		4.1	□□□□□ -1.75
VPS72	YDR485C	SCM4	P32564	187 aa		4.1	□□□□□ -1.75
VPS72	YDR485C	DAD3	P69850	94 aa		4.1	□□□□□ -1.75
VPS72	YDR485C	YOR062C	P36025	268 aa		4.09	□□□□□ -1.75
VPS72	YDR485C	BOL2	P53082	120 aa		4.09	□□□□□ -1.75
VPS72	YDR485C	OCA6	Q12454	224 aa		4.09	□□□□□ -1.75
VPS72	YDR485C	TY1B-H	O13535	1793 aa		4.09	□□□□□ -1.76
VPS72	YDR485C	ANB1	P19211	157 aa		4.09	□□□□□ -1.76
VPS72	YDR485C	YET1	P35723	206 aa		4.09	□□□□□ -1.76
VPS72	YDR485C	YAL064W	P39711	94 aa		4.09	□□□□□ -1.76
VPS72	YDR485C	SRL3	P36167	246 aa		4.08	□□□□□ -1.76
VPS72	YDR485C	ZEO1	Q08245	113 aa		4.08	□□□□□ -1.76
VPS72	YDR485C	SCS22	Q6Q595	175 aa		4.08	□□□□□ -1.76
VPS72	YDR485C	YHL042W	P38729	150 aa		4.07	□□□□□ -1.76
VPS72	YDR485C	PAC10	P48363	199 aa		4.07	□□□□□ -1.76
VPS72	YDR485C	SAY1	P53324	424 aa		4.07	□□□□□ -1.76
VPS72	YDR485C	YDL241W	Q07738	123 aa		4.07	□□□□□ -1.76
VPS72	YDR485C	MYO2	P19524	1574 aa	Known RBP	4.07	□□□□□ -1.76
VPS72	YDR485C	GPA2	P10823	449 aa		4.07	□□□□□ -1.76
VPS72	YDR485C	BAT2	P47176	376 aa	Known RBP	4.07	□□□□□ -1.76
VPS72	YDR485C	RRT7	Q07829	113 aa		4.07	□□□□□ -1.76
VPS72	YDR485C	FEX1	Q08913	375 aa		4.07	□□□□□ -1.76
VPS72	YDR485C	FEX2	Q08991	375 aa		4.07	□□□□□ -1.76
VPS72	YDR485C	SFT2	P38166	215 aa		4.06	□□□□□ -1.76
VPS72	YDR485C	YAR029W	P39549	74 aa		4.06	□□□□□ -1.76
VPS72	YDR485C	MOB1	P40484	314 aa		4.06	□□□□□ -1.76
VPS72	YDR485C	RPL33B	P41056	107 aa	Known RBP	4.06	□□□□□ -1.76
VPS72	YDR485C	YGL230C	P53074	147 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 96.8 ms