RNA–Protein interactions for RNA: YDR416W

SYF1, Transcript of Member of the NineTeen Complex (NTC), yeastyeast

Gene SYF1, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SYF1YDR416W IGD1P43598 195 aa3.25□□□□□ -1.89
SYF1YDR416W OSH6Q02201 448 aa3.25□□□□□ -1.89
SYF1YDR416W YML100W-AQ8TGT0 57 aa3.25□□□□□ -1.89
SYF1YDR416W REP2P03872 296 aa3.24□□□□□ -1.89
SYF1YDR416W PHO13P19881 312 aa3.24□□□□□ -1.89
SYF1YDR416W YAR068WP39564 161 aa3.24□□□□□ -1.89
SYF1YDR416W MIG3P39943 394 aa3.24□□□□□ -1.89
SYF1YDR416W YNL200CP40165 246 aaKnown RBP3.24□□□□□ -1.89
SYF1YDR416W TMA23Q03525 211 aa3.24□□□□□ -1.89
SYF1YDR416W ADK1P07170 222 aaKnown RBP3.24□□□□□ -1.89
SYF1YDR416W ATP15P21306 62 aa3.24□□□□□ -1.89
SYF1YDR416W PCL1P24867 279 aa3.24□□□□□ -1.89
SYF1YDR416W SRP21P32342 167 aa3.24□□□□□ -1.89
SYF1YDR416W RNP1P32385 249 aa3.24□□□□□ -1.89
SYF1YDR416W SNC2P33328 115 aa3.24□□□□□ -1.89
SYF1YDR416W YFL019CP43576 117 aa3.24□□□□□ -1.89
SYF1YDR416W GPI2P46961 280 aa3.24□□□□□ -1.89
SYF1YDR416W APJ1P53940 528 aa3.24□□□□□ -1.89
SYF1YDR416W YMR099CQ03161 297 aaKnown RBP3.24□□□□□ -1.89
SYF1YDR416W YTH1Q06102 208 aaPredicted RBP3.24□□□□□ -1.89
SYF1YDR416W YOL014WQ08110 124 aa3.24□□□□□ -1.89
SYF1YDR416W YDL211CQ12121 372 aa3.24□□□□□ -1.89
SYF1YDR416W SPC3Q12133 184 aa3.24□□□□□ -1.89
SYF1YDR416W PSF1Q12488 208 aa3.24□□□□□ -1.89
SYF1YDR416W YNL277W-AQ3E7Z0 62 aa3.24□□□□□ -1.89
SYF1YDR416W TAD3Q9URQ3 322 aa3.24□□□□□ -1.89
SYF1YDR416W RPB9P27999 122 aa3.23□□□□□ -1.89
SYF1YDR416W COS8P38723 381 aa3.23□□□□□ -1.89
SYF1YDR416W PRE5P40302 234 aaKnown RBP3.23□□□□□ -1.89
SYF1YDR416W YPR114WQ06107 315 aa3.23□□□□□ -1.89
SYF1YDR416W YLR118CQ12354 227 aa3.23□□□□□ -1.89
SYF1YDR416W ISD11Q6Q560 94 aa3.23□□□□□ -1.89
SYF1YDR416W YCL001W-BQ96VH2 84 aa3.23□□□□□ -1.89
SYF1YDR416W YEL009C-AA0A023PZF2 135 aa3.23□□□□□ -1.89
SYF1YDR416W DDI2P0CH63 225 aa3.23□□□□□ -1.89
SYF1YDR416W DDI3P0CH64 225 aa3.23□□□□□ -1.89
SYF1YDR416W ARO2P28777 376 aaKnown RBP3.23□□□□□ -1.89
SYF1YDR416W YBL059WP34224 193 aa3.23□□□□□ -1.89
SYF1YDR416W RCN1P36054 211 aa3.23□□□□□ -1.89
SYF1YDR416W SHB17P36136 271 aaKnown RBP3.23□□□□□ -1.89
SYF1YDR416W YHL026CP38740 315 aa3.23□□□□□ -1.89
SYF1YDR416W YGR017WP53210 297 aa3.23□□□□□ -1.89
SYF1YDR416W AIM36Q03798 255 aa3.23□□□□□ -1.89
SYF1YDR416W YMR253CQ04835 414 aa3.23□□□□□ -1.89
SYF1YDR416W NAT3Q06504 195 aa3.23□□□□□ -1.89
SYF1YDR416W MCH1Q07376 486 aa3.23□□□□□ -1.89
SYF1YDR416W SPT14P32363 452 aa3.22□□□□□ -1.89
SYF1YDR416W YBL010CP32788 280 aa3.22□□□□□ -1.89
SYF1YDR416W MRPL17P36528 281 aa3.22□□□□□ -1.89
SYF1YDR416W YNL033WP53964 284 aa3.22□□□□□ -1.89
SYF1YDR416W YNL019CP53975 284 aa3.22□□□□□ -1.89
SYF1YDR416W ATG39Q06159 398 aa3.22□□□□□ -1.89
SYF1YDR416W SRL1Q08673 210 aa3.22□□□□□ -1.89
SYF1YDR416W CBP6P07253 162 aaPredicted RBP3.22□□□□□ -1.89
SYF1YDR416W SPT15P13393 240 aaKnown RBP3.22□□□□□ -1.89
SYF1YDR416W YRA2P36036 203 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SYF1YDR416W SFT1P43682 97 aa3.22□□□□□ -1.89
SYF1YDR416W RPS12P48589 143 aaKnown RBP3.22□□□□□ -1.89
SYF1YDR416W AIM11P87275 137 aa3.22□□□□□ -1.89
SYF1YDR416W ZEO1Q08245 113 aa3.22□□□□□ -1.89
SYF1YDR416W YDR034W-BQ6Q5X2 51 aa3.22□□□□□ -1.89
SYF1YDR416W SGA1P08019 549 aa3.21□□□□□ -1.9
SYF1YDR416W NSP1P14907 823 aaKnown RBP3.21□□□□□ -1.9
SYF1YDR416W TOM40P23644 387 aaKnown RBP3.21□□□□□ -1.9
SYF1YDR416W YHR140WP38842 239 aa3.21□□□□□ -1.9
SYF1YDR416W AIF1P52923 378 aa3.21□□□□□ -1.9
SYF1YDR416W SCW4P53334 386 aaKnown RBP3.21□□□□□ -1.9
SYF1YDR416W BOL1Q3E793 110 aa3.21□□□□□ -1.9
SYF1YDR416W YAL067W-AQ8TGK6 75 aa3.21□□□□□ -1.9
SYF1YDR416W FKS1P38631 1876 aaKnown RBP3.21□□□□□ -1.9
SYF1YDR416W ECM29P38737 1868 aa3.21□□□□□ -1.9
SYF1YDR416W DUR1,2P32528 1835 aaKnown RBP3.21□□□□□ -1.9
SYF1YDR416W CUP1-1P0CX80 61 aa3.21□□□□□ -1.9
SYF1YDR416W CUP1-2P0CX81 61 aa3.21□□□□□ -1.9
SYF1YDR416W VMA11P32842 164 aa3.21□□□□□ -1.9
SYF1YDR416W RRT13P40042 185 aa3.21□□□□□ -1.9
SYF1YDR416W YER134CP40081 178 aa3.21□□□□□ -1.9
SYF1YDR416W YDR391CQ04170 232 aa3.21□□□□□ -1.9
SYF1YDR416W SPG3Q04398 127 aaPredicted RBP3.21□□□□□ -1.9
SYF1YDR416W AUS1Q08409 1394 aa3.2□□□□□ -1.9
SYF1YDR416W RPL9AP05738 191 aaKnown RBP3.2□□□□□ -1.9
SYF1YDR416W GPI18P38211 433 aa3.2□□□□□ -1.9
SYF1YDR416W RFS1P38234 210 aaKnown RBP3.2□□□□□ -1.9
SYF1YDR416W FYV4P38783 130 aaPredicted RBP3.2□□□□□ -1.9
SYF1YDR416W VTC1P40046 129 aaRIP-Chip data3.2□□□□□ -1.9not detected
SYF1YDR416W YJL218WP40892 196 aaKnown RBP3.2□□□□□ -1.9
SYF1YDR416W RPL9BP51401 191 aaKnown RBP3.2□□□□□ -1.9
SYF1YDR416W YGL193CP53097 103 aa3.2□□□□□ -1.9
SYF1YDR416W CAX4P53223 239 aa3.2□□□□□ -1.9
SYF1YDR416W VPS28Q02767 242 aa3.2□□□□□ -1.9
SYF1YDR416W FCF2Q12035 217 aaPredicted RBP3.2□□□□□ -1.9
SYF1YDR416W MOT1P32333 1867 aa3.2□□□□□ -1.9
SYF1YDR416W TAO3P40468 2376 aa3.2□□□□□ -1.9
SYF1YDR416W RPL14AP36105 138 aaKnown RBP3.2□□□□□ -1.9
SYF1YDR416W YKR070WP36151 352 aaKnown RBP3.2□□□□□ -1.9
SYF1YDR416W YBR220CP38318 560 aa3.2□□□□□ -1.9
SYF1YDR416W RPL14BP38754 138 aaKnown RBP3.2□□□□□ -1.9
SYF1YDR416W FSF1Q12029 327 aaKnown RBP3.2□□□□□ -1.9
SYF1YDR416W FMP46P36141 133 aaKnown RBP3.19□□□□□ -1.9
SYF1YDR416W RSM10Q03201 203 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms