RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C PAU9Q3E770 120 aa3.84□□□□□ -1.8
PRP28YDR243C YCR024C-BQ3E7Z8 88 aa3.84□□□□□ -1.8
PRP28YDR243C SCS22Q6Q595 175 aa3.84□□□□□ -1.8
PRP28YDR243C ECM12O13529 151 aa3.83□□□□□ -1.8
PRP28YDR243C HEM4P06174 275 aa3.83□□□□□ -1.8
PRP28YDR243C RPB7P34087 171 aa3.83□□□□□ -1.8
PRP28YDR243C MRPL27P36526 146 aaPredicted RBP3.83□□□□□ -1.8
PRP28YDR243C YJL193WP39542 402 aa3.83□□□□□ -1.8
PRP28YDR243C MRPL49P40858 161 aaPredicted RBP3.83□□□□□ -1.8
PRP28YDR243C CUP9P41817 306 aa3.83□□□□□ -1.8
PRP28YDR243C GON7P46984 123 aa3.83□□□□□ -1.8
PRP28YDR243C BOL2P53082 120 aa3.83□□□□□ -1.8
PRP28YDR243C ALG9P53868 555 aaKnown RBP3.83□□□□□ -1.8
PRP28YDR243C MOT3P54785 490 aaKnown RBP3.83□□□□□ -1.8
PRP28YDR243C YMR090WQ04304 227 aaKnown RBP3.83□□□□□ -1.8
PRP28YDR243C YDL218WQ07629 317 aa3.83□□□□□ -1.8
PRP28YDR243C RDL2Q08742 149 aaKnown RBP3.83□□□□□ -1.8
PRP28YDR243C FIT3Q08907 204 aa3.83□□□□□ -1.8
PRP28YDR243C YDR029WQ12111 104 aa3.83□□□□□ -1.8
PRP28YDR243C TAD3Q9URQ3 322 aa3.83□□□□□ -1.8
PRP28YDR243C YCR085WP25650 117 aa3.82□□□□□ -1.8
PRP28YDR243C INM1P38710 295 aa3.82□□□□□ -1.8
PRP28YDR243C CYB5P40312 120 aa3.82□□□□□ -1.8
PRP28YDR243C HNT2P49775 206 aa3.82□□□□□ -1.8
PRP28YDR243C GEP7P53171 287 aa3.82□□□□□ -1.8
PRP28YDR243C ERG13P54839 491 aaKnown RBP3.82□□□□□ -1.8
PRP28YDR243C YPR071WQ12346 211 aa3.82□□□□□ -1.8
PRP28YDR243C PRP46Q12417 451 aaPredicted RBP3.82□□□□□ -1.8
PRP28YDR243C YLR412C-AQ3E742 68 aa3.82□□□□□ -1.8
PRP28YDR243C ENV10Q99382 181 aa3.82□□□□□ -1.8
PRP28YDR243C FMP49A0A023PZB3 126 aa3.81□□□□□ -1.8
PRP28YDR243C YGL010WP25338 174 aa3.81□□□□□ -1.8
PRP28YDR243C YCR100CP25606 316 aa3.81□□□□□ -1.8
PRP28YDR243C ARC40P38328 384 aaKnown RBP3.81□□□□□ -1.8
PRP28YDR243C GLE2P40066 365 aa3.81□□□□□ -1.8
PRP28YDR243C BTT1P40314 149 aaPredicted RBP3.81□□□□□ -1.8
PRP28YDR243C YIL169CP40442 995 aa3.81□□□□□ -1.8
PRP28YDR243C EGT2P42835 1041 aa3.81□□□□□ -1.8
PRP28YDR243C RRT5P43607 289 aa3.81□□□□□ -1.8
PRP28YDR243C MIC27P50945 234 aa3.81□□□□□ -1.8
PRP28YDR243C MSO1P53604 210 aaKnown RBP3.81□□□□□ -1.8
PRP28YDR243C SUN4P53616 420 aa3.81□□□□□ -1.8
PRP28YDR243C NAT3Q06504 195 aa3.81□□□□□ -1.8
PRP28YDR243C YOR338WQ99326 363 aa3.81□□□□□ -1.8
PRP28YDR243C MKK1P32490 508 aa3.81□□□□□ -1.8
PRP28YDR243C SPS18P32572 300 aa3.81□□□□□ -1.8
PRP28YDR243C GPX1P36014 167 aa3.81□□□□□ -1.8
PRP28YDR243C MID2P36027 376 aa3.81□□□□□ -1.8
PRP28YDR243C SWD2P36104 329 aaPredicted RBP3.81□□□□□ -1.8
PRP28YDR243C YKR041WP36134 250 aa3.81□□□□□ -1.8
PRP28YDR243C ARP3P47117 449 aaKnown RBP3.81□□□□□ -1.8
PRP28YDR243C RPL21AQ02753 160 aaKnown RBP3.81□□□□□ -1.8
PRP28YDR243C RIM9Q04734 239 aa3.81□□□□□ -1.8
PRP28YDR243C YLR296WQ05898 108 aa3.81□□□□□ -1.8
PRP28YDR243C GRX8Q05926 109 aa3.81□□□□□ -1.8
PRP28YDR243C YLR042CQ07990 161 aa3.81□□□□□ -1.8
PRP28YDR243C SME1Q12330 94 aaPredicted RBP3.81□□□□□ -1.8
PRP28YDR243C RPL21BQ12672 160 aaKnown RBP3.81□□□□□ -1.8
PRP28YDR243C MSB2P32334 1306 aa3.8□□□□□ -1.8
PRP28YDR243C COX9P07255 59 aa3.8□□□□□ -1.8
PRP28YDR243C NHP2P32495 156 aaPredicted RBP3.8□□□□□ -1.8
PRP28YDR243C RPA12P32529 125 aaKnown RBP3.8□□□□□ -1.8
PRP28YDR243C MRP21P38175 177 aa3.8□□□□□ -1.8
PRP28YDR243C CCS1P40202 249 aaKnown RBP3.8□□□□□ -1.8
PRP28YDR243C YJR096WP47137 282 aa3.8□□□□□ -1.8
PRP28YDR243C COF1Q03048 143 aaKnown RBP3.8□□□□□ -1.8
PRP28YDR243C YMR103CQ04436 120 aa3.8□□□□□ -1.8
PRP28YDR243C ARC18Q05933 178 aaKnown RBP3.8□□□□□ -1.8
PRP28YDR243C RXT3Q07458 294 aa3.8□□□□□ -1.8
PRP28YDR243C MRH1Q12117 320 aaPredicted RBP3.8□□□□□ -1.8
PRP28YDR243C YKL023C-AQ2V2P3 75 aa3.8□□□□□ -1.8
PRP28YDR243C YDR119W-AQ2V2P9 66 aa3.8□□□□□ -1.8
PRP28YDR243C RPL11AP0C0W9 174 aaKnown RBP3.79□□□□□ -1.8
PRP28YDR243C YLL053CP0CD98 152 aa3.79□□□□□ -1.8
PRP28YDR243C RPB8P20436 146 aa3.79□□□□□ -1.8
PRP28YDR243C PDE1P22434 369 aa3.79□□□□□ -1.8
PRP28YDR243C VID24P38263 362 aa3.79□□□□□ -1.8
PRP28YDR243C KNH1P50112 268 aa3.79□□□□□ -1.8
PRP28YDR243C CAX4P53223 239 aa3.79□□□□□ -1.8
PRP28YDR243C BUD25P85052 153 aa3.79□□□□□ -1.8
PRP28YDR243C NRG1Q03125 231 aa3.79□□□□□ -1.8
PRP28YDR243C SDC1Q03323 175 aa3.79□□□□□ -1.8
PRP28YDR243C SYM1Q06563 197 aa3.79□□□□□ -1.8
PRP28YDR243C SLM3Q12093 417 aa3.79□□□□□ -1.8
PRP28YDR243C RPL11BQ3E757 174 aaPredicted RBP3.79□□□□□ -1.8
PRP28YDR243C YAL063C-AQ3E791 96 aa3.79□□□□□ -1.8
PRP28YDR243C YAR068WP39564 161 aa3.79□□□□□ -1.8
PRP28YDR243C YEL028WP39989 153 aa3.79□□□□□ -1.8
PRP28YDR243C YIR016WP40572 265 aa3.79□□□□□ -1.8
PRP28YDR243C MMS2P53152 137 aa3.79□□□□□ -1.8
PRP28YDR243C YMR310CQ04867 317 aaPredicted RBP3.79□□□□□ -1.8
PRP28YDR243C STP3Q05937 343 aa3.79□□□□□ -1.8
PRP28YDR243C YFH1Q07540 174 aa3.79□□□□□ -1.8
PRP28YDR243C FCY1Q12178 158 aa3.79□□□□□ -1.8
PRP28YDR243C YOR097CQ12274 175 aaPredicted RBP3.79□□□□□ -1.8
PRP28YDR243C ODC2Q99297 307 aa3.79□□□□□ -1.8
PRP28YDR243C RIM15P43565 1770 aa3.78□□□□□ -1.8
PRP28YDR243C BNI1P41832 1953 aa3.78□□□□□ -1.8
PRP28YDR243C PAD1P33751 242 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
PRP28YDR243C PHO88P38264 188 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms