RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C YGR269WP40326 108 aa-0.2□□□□□ -2.44
PCF11YDR228C MOB1P40484 314 aa-0.2□□□□□ -2.44
PCF11YDR228C VPS28Q02767 242 aa-0.2□□□□□ -2.44
PCF11YDR228C AIM34Q03673 198 aa-0.2□□□□□ -2.44
PCF11YDR228C HRD1Q08109 551 aa-0.2□□□□□ -2.44
PCF11YDR228C YOR214CQ12282 236 aa-0.2□□□□□ -2.44
PCF11YDR228C SPS2P08459 502 aa-0.21□□□□□ -2.44
PCF11YDR228C AHC2P25649 128 aa-0.21□□□□□ -2.44
PCF11YDR228C UBC6P33296 250 aaPredicted RBP-0.21□□□□□ -2.44
PCF11YDR228C YHR140WP38842 239 aa-0.21□□□□□ -2.44
PCF11YDR228C FMP32P43557 207 aa-0.21□□□□□ -2.44
PCF11YDR228C NQM1P53228 333 aaPredicted RBP-0.21□□□□□ -2.44
PCF11YDR228C RIB3Q99258 208 aa-0.21□□□□□ -2.44
PCF11YDR228C TAF2P23255 1407 aa-0.21□□□□□ -2.44
PCF11YDR228C HAP2P06774 265 aa-0.22□□□□□ -2.44
PCF11YDR228C MATALPHA2P0CY08 210 aa-0.22□□□□□ -2.44
PCF11YDR228C HMLALPHA2P0CY09 210 aa-0.22□□□□□ -2.44
PCF11YDR228C TAH1P25638 111 aaPredicted RBP-0.22□□□□□ -2.44
PCF11YDR228C SPT14P32363 452 aa-0.22□□□□□ -2.44
PCF11YDR228C RFC2P40348 353 aa-0.22□□□□□ -2.44
PCF11YDR228C VAM10Q08474 114 aa-0.22□□□□□ -2.44
PCF11YDR228C JIP3O13555 125 aa-0.22□□□□□ -2.45
PCF11YDR228C YKL102CP34249 101 aa-0.22□□□□□ -2.45
PCF11YDR228C TTI2P47168 421 aa-0.22□□□□□ -2.45
PCF11YDR228C GEP7P53171 287 aa-0.23□□□□□ -2.45
PCF11YDR228C SHH4Q06236 168 aa-0.23□□□□□ -2.45
PCF11YDR228C NOC4Q06512 552 aaPredicted RBP-0.23□□□□□ -2.45
PCF11YDR228C CMC4Q3E7A9 73 aa-0.23□□□□□ -2.45
PCF11YDR228C CDC39P25655 2108 aaKnown RBP-0.24□□□□□ -2.45
PCF11YDR228C INO4P13902 151 aa-0.24□□□□□ -2.45
PCF11YDR228C LAA1P39526 2014 aa-0.24□□□□□ -2.45
PCF11YDR228C CSH1P38287 376 aa-0.24□□□□□ -2.45
PCF11YDR228C YDL241WQ07738 123 aa-0.24□□□□□ -2.45
PCF11YDR228C TAO3P40468 2376 aa-0.25□□□□□ -2.45
PCF11YDR228C RAD6P06104 172 aa-0.25□□□□□ -2.45
PCF11YDR228C TRX3P25372 127 aa-0.25□□□□□ -2.45
PCF11YDR228C RPS29BP41058 56 aaKnown RBP-0.25□□□□□ -2.45
PCF11YDR228C SOL1P50278 321 aa-0.25□□□□□ -2.45
PCF11YDR228C BLM10P43583 2143 aa-0.25□□□□□ -2.45
PCF11YDR228C HOP2P53187 214 aa-0.26□□□□□ -2.45
PCF11YDR228C RPB4P20433 221 aaPredicted RBP-0.27□□□□□ -2.45
PCF11YDR228C YKR041WP36134 250 aa-0.27□□□□□ -2.45
PCF11YDR228C YEL028WP39989 153 aa-0.27□□□□□ -2.45
PCF11YDR228C YEL014CP39999 101 aa-0.27□□□□□ -2.45
PCF11YDR228C RNH1Q04740 348 aa-0.27□□□□□ -2.45
PCF11YDR228C GLR1P41921 483 aaKnown RBP-0.27□□□□□ -2.45
PCF11YDR228C TIM13P53299 105 aa-0.27□□□□□ -2.45
PCF11YDR228C GRX8Q05926 109 aa-0.27□□□□□ -2.45
PCF11YDR228C SYM1Q06563 197 aa-0.27□□□□□ -2.45
PCF11YDR228C ATG10Q07879 167 aa-0.27□□□□□ -2.45
PCF11YDR228C YOR034C-AQ3E735 80 aa-0.27□□□□□ -2.45
PCF11YDR228C RAD9P14737 1309 aa-0.27□□□□□ -2.45
PCF11YDR228C MVB12P42939 101 aa-0.28□□□□□ -2.45
PCF11YDR228C HPT1Q04178 221 aaKnown RBP-0.28□□□□□ -2.45
PCF11YDR228C HSP150P32478 413 aa-0.29□□□□□ -2.46
PCF11YDR228C NUF2P33895 451 aa-0.29□□□□□ -2.46
PCF11YDR228C CAF4P36130 643 aa-0.29□□□□□ -2.46
PCF11YDR228C HTD2P38790 280 aaKnown RBP-0.29□□□□□ -2.46
PCF11YDR228C LIP1Q03579 150 aa-0.29□□□□□ -2.46
PCF11YDR228C NVJ1P38881 321 aa-0.29□□□□□ -2.46
PCF11YDR228C BRX1Q08235 291 aaKnown RBP-0.29□□□□□ -2.46
PCF11YDR228C TRM3Q07527 1436 aa-0.3□□□□□ -2.46
PCF11YDR228C ECM31P38122 312 aa-0.3□□□□□ -2.46
PCF11YDR228C SLM6P38343 150 aa-0.3□□□□□ -2.46
PCF11YDR228C YPT31P38555 223 aaKnown RBP-0.3□□□□□ -2.46
PCF11YDR228C XPT1P47165 209 aa-0.3□□□□□ -2.46
PCF11YDR228C YMR321CQ04898 105 aa-0.3□□□□□ -2.46
PCF11YDR228C YPR114WQ06107 315 aa-0.3□□□□□ -2.46
PCF11YDR228C HYP2P23301 157 aaKnown RBP-0.31□□□□□ -2.46
PCF11YDR228C SHG1P38337 142 aa-0.31□□□□□ -2.46
PCF11YDR228C SNF2P22082 1703 aa-0.31□□□□□ -2.46
PCF11YDR228C URA2P07259 2214 aaKnown RBP-0.31□□□□□ -2.46
PCF11YDR228C DIE2P50076 525 aa-0.31□□□□□ -2.46
PCF11YDR228C UIP4Q08926 304 aa-0.31□□□□□ -2.46
PCF11YDR228C FMN1Q03778 218 aa-0.32□□□□□ -2.46
PCF11YDR228C PHO13P19881 312 aa-0.33□□□□□ -2.46
PCF11YDR228C YKT6P36015 200 aaKnown RBP-0.33□□□□□ -2.46
PCF11YDR228C YDR102CQ03864 110 aa-0.33□□□□□ -2.46
PCF11YDR228C RPL33AP05744 107 aaKnown RBP-0.33□□□□□ -2.46
PCF11YDR228C SNO1Q03144 224 aa-0.33□□□□□ -2.46
PCF11YDR228C IPT1P38954 527 aa-0.34□□□□□ -2.46
PCF11YDR228C TIM11P81449 96 aaPredicted RBP-0.34□□□□□ -2.46
PCF11YDR228C JAC1P53193 184 aa-0.35□□□□□ -2.46
PCF11YDR228C HUG1Q6Q5K6 68 aa-0.35□□□□□ -2.46
PCF11YDR228C MDN1Q12019 4910 aaKnown RBP-0.35□□□□□ -2.47
PCF11YDR228C HSL1P34244 1518 aa-0.35□□□□□ -2.47
PCF11YDR228C NMA1Q06178 401 aaKnown RBP-0.35□□□□□ -2.47
PCF11YDR228C COA6Q3E846 104 aa-0.35□□□□□ -2.47
PCF11YDR228C MYO1P08964 1928 aa-0.36□□□□□ -2.47
PCF11YDR228C SRP102P36057 244 aaPredicted RBP-0.36□□□□□ -2.47
PCF11YDR228C BNI1P41832 1953 aa-0.36□□□□□ -2.47
PCF11YDR228C GSC2P40989 1895 aa-0.37□□□□□ -2.47
PCF11YDR228C ADE6P38972 1358 aaKnown RBP-0.37□□□□□ -2.47
PCF11YDR228C YJL009WP47078 108 aa-0.37□□□□□ -2.47
PCF11YDR228C YNR064CP53750 290 aa-0.37□□□□□ -2.47
PCF11YDR228C IRC21Q04772 201 aa-0.37□□□□□ -2.47
PCF11YDR228C FAS2P19097 1887 aaKnown RBP-0.37□□□□□ -2.47
PCF11YDR228C THI74Q04083 370 aa-0.37□□□□□ -2.47
PCF11YDR228C DDR48P18899 430 aaKnown RBP-0.38□□□□□ -2.47
PCF11YDR228C MRS4P23500 304 aa-0.39□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 57 ms