RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	PUT1	P09368	476 aa		4.81	□□□□□ -1.64
CDC1	YDR182W	RPS25B	P0C0T4	108 aa	Known RBP	4.81	□□□□□ -1.64
CDC1	YDR182W	GLE2	P40066	365 aa		4.81	□□□□□ -1.64
CDC1	YDR182W	YJR015W	P47090	510 aa		4.81	□□□□□ -1.64
CDC1	YDR182W	PDR17	P53844	350 aa		4.81	□□□□□ -1.64
CDC1	YDR182W	RPS25A	Q3E792	108 aa	Predicted RBP	4.81	□□□□□ -1.64
CDC1	YDR182W	CDC7	P06243	507 aa		4.81	□□□□□ -1.64
CDC1	YDR182W	YHR213W	P0CI67	198 aa		4.81	□□□□□ -1.64
CDC1	YDR182W	SNF11	P38956	169 aa		4.81	□□□□□ -1.64
CDC1	YDR182W	LCB3	P47013	409 aa		4.81	□□□□□ -1.64
CDC1	YDR182W	PKP2	P53170	491 aa		4.81	□□□□□ -1.64
CDC1	YDR182W	GPI15	P53961	229 aa		4.81	□□□□□ -1.64
CDC1	YDR182W	COX12	Q01519	83 aa		4.81	□□□□□ -1.64
CDC1	YDR182W	LDS2	Q08218	356 aa		4.81	□□□□□ -1.64
CDC1	YDR182W	POM34	Q12445	299 aa		4.81	□□□□□ -1.64
CDC1	YDR182W	PRM7	Q12459	698 aa		4.81	□□□□□ -1.64
CDC1	YDR182W	SIP1	P32578	815 aa		4.8	□□□□□ -1.64
CDC1	YDR182W	CSH1	P38287	376 aa		4.8	□□□□□ -1.64
CDC1	YDR182W	YLR146W-A	Q2V2P1	62 aa		4.8	□□□□□ -1.64
CDC1	YDR182W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
CDC1	YDR182W	CMC1	P36064	111 aa		4.79	□□□□□ -1.64
CDC1	YDR182W	YPC1	P38298	316 aa		4.79	□□□□□ -1.64
CDC1	YDR182W	ODC1	Q03028	310 aa		4.79	□□□□□ -1.64
CDC1	YDR182W	SLM6	P38343	150 aa		4.78	□□□□□ -1.64
CDC1	YDR182W	YEA6	P39953	335 aa		4.78	□□□□□ -1.64
CDC1	YDR182W	RPL13B	P40212	199 aa	Known RBP	4.78	□□□□□ -1.64
CDC1	YDR182W	GPI2	P46961	280 aa		4.78	□□□□□ -1.64
CDC1	YDR182W	IMP2	P46972	177 aa		4.78	□□□□□ -1.64
CDC1	YDR182W	ATG27	P46989	271 aa		4.78	□□□□□ -1.64
CDC1	YDR182W	HST4	P53688	370 aa		4.78	□□□□□ -1.64
CDC1	YDR182W	MRPS16	Q02608	121 aa		4.78	□□□□□ -1.64
CDC1	YDR182W	SDH7	Q04401	133 aa		4.78	□□□□□ -1.64
CDC1	YDR182W	ERP1	Q05359	219 aa	Known RBP	4.78	□□□□□ -1.64
CDC1	YDR182W	ARR3	Q06598	404 aa		4.78	□□□□□ -1.64
CDC1	YDR182W	RPL13A	Q12690	199 aa	Predicted RBP	4.78	□□□□□ -1.64
CDC1	YDR182W	RPP2A	P05319	106 aa	Known RBP	4.77	□□□□□ -1.65
CDC1	YDR182W	YCR025C	P25352	136 aa		4.77	□□□□□ -1.65
CDC1	YDR182W	SHB17	P36136	271 aa	Known RBP	4.77	□□□□□ -1.65
CDC1	YDR182W	YGR269W	P40326	108 aa		4.77	□□□□□ -1.65
CDC1	YDR182W	YIP3	P53633	176 aa		4.77	□□□□□ -1.65
CDC1	YDR182W	FPR2	P32472	135 aa		4.76	□□□□□ -1.65
CDC1	YDR182W	YJR111C	P47148	283 aa	Known RBP	4.76	□□□□□ -1.65
CDC1	YDR182W	TIM44	Q01852	431 aa		4.76	□□□□□ -1.65
CDC1	YDR182W	YMR244W	Q04018	355 aa		4.76	□□□□□ -1.65
CDC1	YDR182W	YMR082C	Q04276	118 aa		4.76	□□□□□ -1.65
CDC1	YDR182W	SHH3	Q04487	196 aa		4.76	□□□□□ -1.65
CDC1	YDR182W	IZH3	Q07959	543 aa		4.76	□□□□□ -1.65
CDC1	YDR182W	AYT1	Q12226	474 aa		4.76	□□□□□ -1.65
CDC1	YDR182W	YHR213W-A	Q8TGT4	77 aa		4.76	□□□□□ -1.65
CDC1	YDR182W	UPS2	P35200	230 aa		4.75	□□□□□ -1.65
CDC1	YDR182W	LSM2	P38203	95 aa	Known RBP	4.75	□□□□□ -1.65
CDC1	YDR182W	MIC27	P50945	234 aa		4.75	□□□□□ -1.65
CDC1	YDR182W	UBC7	Q02159	165 aa		4.75	□□□□□ -1.65
CDC1	YDR182W	CTR3	Q06686	241 aa		4.75	□□□□□ -1.65
CDC1	YDR182W	PRR2	Q12310	699 aa		4.75	□□□□□ -1.65
CDC1	YDR182W	SFT2	P38166	215 aa		4.75	□□□□□ -1.65
CDC1	YDR182W	YER135C	P40082	130 aa		4.75	□□□□□ -1.65
CDC1	YDR182W	SWM2	P40342	146 aa		4.75	□□□□□ -1.65
CDC1	YDR182W	YIL077C	P40508	320 aa		4.75	□□□□□ -1.65
CDC1	YDR182W	PNC1	P53184	216 aa	Known RBP	4.75	□□□□□ -1.65
CDC1	YDR182W	DID2	P69771	204 aa		4.75	□□□□□ -1.65
CDC1	YDR182W	YOL160W	Q08321	113 aa		4.75	□□□□□ -1.65
CDC1	YDR182W	TIR2	P33890	251 aa		4.74	□□□□□ -1.65
CDC1	YDR182W	MIG3	P39943	394 aa		4.74	□□□□□ -1.65
CDC1	YDR182W	URM1	P40554	99 aa	Predicted RBP	4.74	□□□□□ -1.65
CDC1	YDR182W	BOR1	P53838	576 aa		4.74	□□□□□ -1.65
CDC1	YDR182W	IZH1	Q03419	316 aa		4.74	□□□□□ -1.65
CDC1	YDR182W	YMR007W	Q03675	126 aa		4.74	□□□□□ -1.65
CDC1	YDR182W	MRPS8	Q03799	155 aa		4.74	□□□□□ -1.65
CDC1	YDR182W	STP4	Q07351	490 aa		4.74	□□□□□ -1.65
CDC1	YDR182W	YNL146C-A	Q3E7Z1	64 aa		4.74	□□□□□ -1.65
CDC1	YDR182W	ZRC1	P20107	442 aa		4.73	□□□□□ -1.65
CDC1	YDR182W	NPL6	P32832	435 aa		4.73	□□□□□ -1.65
CDC1	YDR182W	PET100	P38958	111 aa		4.73	□□□□□ -1.65
CDC1	YDR182W	YFR035C	P43608	114 aa		4.73	□□□□□ -1.65
CDC1	YDR182W	AIM24	P47127	394 aa		4.73	□□□□□ -1.65
CDC1	YDR182W	YLR125W	Q12138	136 aa		4.73	□□□□□ -1.65
CDC1	YDR182W	ISN1	Q99312	450 aa		4.73	□□□□□ -1.65
CDC1	YDR182W	GCN3	P14741	305 aa		4.72	□□□□□ -1.65
CDC1	YDR182W	CKS1	P20486	150 aa	Known RBP	4.72	□□□□□ -1.65
CDC1	YDR182W	YCR001W	P25347	104 aa		4.72	□□□□□ -1.65
CDC1	YDR182W	DER1	P38307	211 aa		4.72	□□□□□ -1.65
CDC1	YDR182W	YNR071C	P53757	342 aa		4.72	□□□□□ -1.65
CDC1	YDR182W	HAL1	Q01766	294 aa		4.72	□□□□□ -1.65
CDC1	YDR182W	ACB1	P31787	87 aa		4.71	□□□□□ -1.66
CDC1	YDR182W	YBL059W	P34224	193 aa		4.71	□□□□□ -1.66
CDC1	YDR182W	VMA22	P38784	181 aa		4.71	□□□□□ -1.66
CDC1	YDR182W	ORM1	P53224	222 aa		4.71	□□□□□ -1.66
CDC1	YDR182W	YDL242W	Q07746	117 aa		4.71	□□□□□ -1.66
CDC1	YDR182W	SPO13	P23624	291 aa		4.7	□□□□□ -1.66
CDC1	YDR182W	CDC50	P25656	391 aa		4.7	□□□□□ -1.66
CDC1	YDR182W	YEA4	P40004	342 aa		4.7	□□□□□ -1.66
CDC1	YDR182W	PRE5	P40302	234 aa	Known RBP	4.7	□□□□□ -1.66
CDC1	YDR182W	YGL117W	P53133	265 aa		4.7	□□□□□ -1.66
CDC1	YDR182W	BER1	Q06688	274 aa	Known RBP	4.7	□□□□□ -1.66
CDC1	YDR182W	YPL162C	Q12042	273 aa		4.7	□□□□□ -1.66
CDC1	YDR182W	PHD1	P36093	366 aa		4.69	□□□□□ -1.66
CDC1	YDR182W	SAS2	P40963	338 aa		4.69	□□□□□ -1.66
CDC1	YDR182W	MCM22	P47167	239 aa		4.69	□□□□□ -1.66
CDC1	YDR182W	YLR179C	Q06252	201 aa	Known RBP	4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 164.3 ms