RNA–Protein interactions for RNA: YDL007W

RPT2, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT2, Length 1,314 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT2	YDL007W	YLR365W	Q7LIF2	110 aa		4.56	□□□□□ -1.68
RPT2	YDL007W	SOD1	P00445	154 aa	Known RBP	4.55	□□□□□ -1.68
RPT2	YDL007W	YKR104W	P0CE69	306 aa		4.55	□□□□□ -1.68
RPT2	YDL007W	YFL068W	P0CX99	160 aa		4.55	□□□□□ -1.68
RPT2	YDL007W	YLL066W-A	P0CY00	160 aa		4.55	□□□□□ -1.68
RPT2	YDL007W	YLL067W-A	P0CY01	160 aa		4.55	□□□□□ -1.68
RPT2	YDL007W	DAL82	P21705	255 aa		4.55	□□□□□ -1.68
RPT2	YDL007W	QCR9	P22289	66 aa		4.55	□□□□□ -1.68
RPT2	YDL007W	ERG8	P24521	451 aa		4.55	□□□□□ -1.68
RPT2	YDL007W	PCL1	P24867	279 aa		4.55	□□□□□ -1.68
RPT2	YDL007W	YBL059W	P34224	193 aa		4.55	□□□□□ -1.68
RPT2	YDL007W	WSC4	P38739	605 aa		4.55	□□□□□ -1.68
RPT2	YDL007W	PRM5	P40476	318 aa		4.55	□□□□□ -1.68
RPT2	YDL007W	YFR054C	P43622	192 aa		4.55	□□□□□ -1.68
RPT2	YDL007W	YNL184C	P53876	108 aa		4.55	□□□□□ -1.68
RPT2	YDL007W	YPR147C	Q06522	304 aa	Known RBP	4.55	□□□□□ -1.68
RPT2	YDL007W	FRE8	Q12209	686 aa		4.55	□□□□□ -1.68
RPT2	YDL007W	ATO3	Q12359	275 aa		4.55	□□□□□ -1.68
RPT2	YDL007W	YOR343C	Q12484	108 aa		4.55	□□□□□ -1.68
RPT2	YDL007W	YLR363W-A	Q3E747	85 aa		4.55	□□□□□ -1.68
RPT2	YDL007W	YBR255C-A	Q3E776	120 aa		4.55	□□□□□ -1.68
RPT2	YDL007W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.55	□□□□□ -1.68
RPT2	YDL007W	TIR1	P10863	254 aa		4.54	□□□□□ -1.68
RPT2	YDL007W	SRP21	P32342	167 aa		4.54	□□□□□ -1.68
RPT2	YDL007W	FYV4	P38783	130 aa	Predicted RBP	4.54	□□□□□ -1.68
RPT2	YDL007W	YHR180W	P38868	163 aa		4.54	□□□□□ -1.68
RPT2	YDL007W	YIL163C	P40448	117 aa		4.54	□□□□□ -1.68
RPT2	YDL007W	YPS6	P40583	537 aa		4.54	□□□□□ -1.68
RPT2	YDL007W	CUP9	P41817	306 aa		4.54	□□□□□ -1.68
RPT2	YDL007W	NCE101	Q02820	53 aa		4.54	□□□□□ -1.68
RPT2	YDL007W	YDR391C	Q04170	232 aa		4.54	□□□□□ -1.68
RPT2	YDL007W	LPP1	Q04396	274 aa		4.54	□□□□□ -1.68
RPT2	YDL007W	YPR174C	Q06616	221 aa	Predicted RBP	4.54	□□□□□ -1.68
RPT2	YDL007W	PRP11	Q07350	266 aa	Predicted RBP	4.54	□□□□□ -1.68
RPT2	YDL007W	YPR108W-A	Q3E7B3	70 aa		4.54	□□□□□ -1.68
RPT2	YDL007W	FLO9	P39712	1322 aa		4.54	□□□□□ -1.68
RPT2	YDL007W	ADH1	P00330	348 aa	Known RBP	4.53	□□□□□ -1.68
RPT2	YDL007W	COX1	P00401	534 aa		4.53	□□□□□ -1.68
RPT2	YDL007W	SEC4	P07560	215 aa	Known RBP	4.53	□□□□□ -1.68
RPT2	YDL007W	YER190C-B	P0CX94	160 aa		4.53	□□□□□ -1.68
RPT2	YDL007W	YEL077W-A	P0CX95	160 aa		4.53	□□□□□ -1.68
RPT2	YDL007W	YGR296C-B	P0CX96	160 aa		4.53	□□□□□ -1.68
RPT2	YDL007W	YPL283W-B	P0CX97	160 aa		4.53	□□□□□ -1.68
RPT2	YDL007W	YPR204C-A	P0CX98	160 aa		4.53	□□□□□ -1.68
RPT2	YDL007W	CUP2	P15315	225 aa		4.53	□□□□□ -1.68
RPT2	YDL007W	RPB7	P34087	171 aa		4.53	□□□□□ -1.68
RPT2	YDL007W	YKR070W	P36151	352 aa	Known RBP	4.53	□□□□□ -1.68
RPT2	YDL007W	YPT10	P38146	199 aa		4.53	□□□□□ -1.68
RPT2	YDL007W	ECM33	P38248	429 aa	Known RBP	4.53	□□□□□ -1.68
RPT2	YDL007W	SNU13	P39990	126 aa	Known RBP	4.53	□□□□□ -1.68
RPT2	YDL007W	COX15	P40086	486 aa		4.53	□□□□□ -1.68
RPT2	YDL007W	DFG10	P40526	253 aa		4.53	□□□□□ -1.68
RPT2	YDL007W	YAR1	P46683	200 aa		4.53	□□□□□ -1.68
RPT2	YDL007W	YJR015W	P47090	510 aa		4.53	□□□□□ -1.68
RPT2	YDL007W	NRM1	P53718	249 aa		4.53	□□□□□ -1.68
RPT2	YDL007W	GRH1	Q04410	372 aa	Known RBP	4.53	□□□□□ -1.68
RPT2	YDL007W	YDR286C	Q05530	114 aa		4.53	□□□□□ -1.68
RPT2	YDL007W	MIM1	Q08176	113 aa		4.53	□□□□□ -1.68
RPT2	YDL007W	MCP1	Q12106	302 aa		4.53	□□□□□ -1.68
RPT2	YDL007W	GEP5	Q12393	293 aa		4.53	□□□□□ -1.68
RPT2	YDL007W	YER175W-A	Q8TGU4	54 aa		4.53	□□□□□ -1.68
RPT2	YDL007W	FCY2	P17064	533 aa		4.52	□□□□□ -1.69
RPT2	YDL007W	SOR1	P35497	357 aa	Known RBP	4.52	□□□□□ -1.69
RPT2	YDL007W	PHD1	P36093	366 aa		4.52	□□□□□ -1.69
RPT2	YDL007W	YBR090C	P38253	122 aa		4.52	□□□□□ -1.69
RPT2	YDL007W	OSW5	P40219	148 aa		4.52	□□□□□ -1.69
RPT2	YDL007W	CYB5	P40312	120 aa		4.52	□□□□□ -1.69
RPT2	YDL007W	CAB4	P53332	305 aa		4.52	□□□□□ -1.69
RPT2	YDL007W	TIM10	P87108	93 aa		4.52	□□□□□ -1.69
RPT2	YDL007W	ARC18	Q05933	178 aa	Known RBP	4.52	□□□□□ -1.69
RPT2	YDL007W	SOR2	Q07786	357 aa		4.52	□□□□□ -1.69
RPT2	YDL007W	TGS1	Q12052	315 aa		4.52	□□□□□ -1.69
RPT2	YDL007W	WIP1	Q2V2P8	89 aa		4.52	□□□□□ -1.69
RPT2	YDL007W	YBR056W-A	I2HB52	66 aa		4.51	□□□□□ -1.69
RPT2	YDL007W	YPT1	P01123	206 aa	Known RBP	4.51	□□□□□ -1.69
RPT2	YDL007W	ATP10	P18496	279 aa		4.51	□□□□□ -1.69
RPT2	YDL007W	FPR1	P20081	114 aa	Known RBP	4.51	□□□□□ -1.69
RPT2	YDL007W	HMX1	P32339	317 aa		4.51	□□□□□ -1.69
RPT2	YDL007W	CTK2	P46962	323 aa		4.51	□□□□□ -1.69
RPT2	YDL007W	DUO1	P53168	247 aa	Known RBP	4.51	□□□□□ -1.69
RPT2	YDL007W	CPD1	P53314	239 aa		4.51	□□□□□ -1.69
RPT2	YDL007W	ELC1	Q03071	99 aa		4.51	□□□□□ -1.69
RPT2	YDL007W	RIM9	Q04734	239 aa		4.51	□□□□□ -1.69
RPT2	YDL007W	PAM18	Q07914	168 aa		4.51	□□□□□ -1.69
RPT2	YDL007W	YOL029C	Q08187	201 aa		4.51	□□□□□ -1.69
RPT2	YDL007W	SWT1	Q12104	458 aa		4.51	□□□□□ -1.69
RPT2	YDL007W	UTP23	Q12339	254 aa	Known RBP	4.51	□□□□□ -1.69
RPT2	YDL007W	ATG40	Q99325	256 aa		4.51	□□□□□ -1.69
RPT2	YDL007W	MDM35	O60200	86 aa		4.5	□□□□□ -1.69
RPT2	YDL007W	GAL7	P08431	366 aa		4.5	□□□□□ -1.69
RPT2	YDL007W	QRI5	P32344	111 aa		4.5	□□□□□ -1.69
RPT2	YDL007W	RAD23	P32628	398 aa	Known RBP	4.5	□□□□□ -1.69
RPT2	YDL007W	ZRT1	P32804	376 aa		4.5	□□□□□ -1.69
RPT2	YDL007W	FMP46	P36141	133 aa	Known RBP	4.5	□□□□□ -1.69
RPT2	YDL007W	DER1	P38307	211 aa		4.5	□□□□□ -1.69
RPT2	YDL007W	YNL200C	P40165	246 aa	Known RBP	4.5	□□□□□ -1.69
RPT2	YDL007W	YIL012W	P40551	113 aa		4.5	□□□□□ -1.69
RPT2	YDL007W	TDA4	P47153	279 aa		4.5	□□□□□ -1.69
RPT2	YDL007W	GEP7	P53171	287 aa		4.5	□□□□□ -1.69
RPT2	YDL007W	YGR050C	P53231	118 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 44.9 ms