RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W CAB4P53332 305 aa2.14□□□□□ -2.07
SWD3YBR175W TIM8P57744 87 aa2.14□□□□□ -2.07
SWD3YBR175W FMN1Q03778 218 aa2.14□□□□□ -2.07
SWD3YBR175W YOR268CQ08734 132 aa2.14□□□□□ -2.07
SWD3YBR175W SAS5Q99314 248 aa2.14□□□□□ -2.07
SWD3YBR175W YAR023CD6VPM8 179 aa2.13□□□□□ -2.07
SWD3YBR175W CPA1P07258 411 aaKnown RBP2.13□□□□□ -2.07
SWD3YBR175W ATP5P09457 212 aa2.13□□□□□ -2.07
SWD3YBR175W CPR5P35176 225 aa2.13□□□□□ -2.07
SWD3YBR175W YKR032WP36127 104 aa2.13□□□□□ -2.07
SWD3YBR175W UTH1P36135 365 aa2.13□□□□□ -2.07
SWD3YBR175W GLC8P41818 229 aa2.13□□□□□ -2.07
SWD3YBR175W GLR1P41921 483 aaKnown RBP2.13□□□□□ -2.07
SWD3YBR175W YFR054CP43622 192 aa2.13□□□□□ -2.07
SWD3YBR175W FIP1P45976 327 aa2.13□□□□□ -2.07
SWD3YBR175W YDR274CP87283 123 aa2.13□□□□□ -2.07
SWD3YBR175W COF1Q03048 143 aaKnown RBP2.13□□□□□ -2.07
SWD3YBR175W SPG3Q04398 127 aaPredicted RBP2.13□□□□□ -2.07
SWD3YBR175W YDR278CQ05612 105 aa2.13□□□□□ -2.07
SWD3YBR175W WIP1Q2V2P8 89 aa2.13□□□□□ -2.07
SWD3YBR175W ODC2Q99297 307 aa2.13□□□□□ -2.07
SWD3YBR175W SHE2P36068 246 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
SWD3YBR175W YNL200CP40165 246 aaKnown RBP2.12□□□□□ -2.07
SWD3YBR175W GVP36P40531 326 aaKnown RBP2.12□□□□□ -2.07
SWD3YBR175W ERJ5P43613 295 aaPredicted RBP2.12□□□□□ -2.07
SWD3YBR175W TIM13P53299 105 aa2.12□□□□□ -2.07
SWD3YBR175W HHO1P53551 258 aa2.12□□□□□ -2.07
SWD3YBR175W YMR099CQ03161 297 aaKnown RBP2.12□□□□□ -2.07
SWD3YBR175W VPS71Q03433 280 aa2.12□□□□□ -2.07
SWD3YBR175W YPD1Q07688 167 aa2.12□□□□□ -2.07
SWD3YBR175W YPR063CQ12160 140 aa2.12□□□□□ -2.07
SWD3YBR175W Q0144Q9ZZW2 109 aa2.12□□□□□ -2.07
SWD3YBR175W MSW1P04803 379 aa2.11□□□□□ -2.07
SWD3YBR175W RPC19P28000 142 aaKnown RBP2.11□□□□□ -2.07
SWD3YBR175W MID2P36027 376 aa2.11□□□□□ -2.07
SWD3YBR175W MRPS9P38120 278 aa2.11□□□□□ -2.07
SWD3YBR175W FYV4P38783 130 aaPredicted RBP2.11□□□□□ -2.07
SWD3YBR175W YER181CP40097 107 aa2.11□□□□□ -2.07
SWD3YBR175W YGR219WP53307 113 aa2.11□□□□□ -2.07
SWD3YBR175W YDR366CP87287 132 aa2.11□□□□□ -2.07
SWD3YBR175W FRQ1Q06389 190 aa2.11□□□□□ -2.07
SWD3YBR175W YOR214CQ12282 236 aa2.11□□□□□ -2.07
SWD3YBR175W ATP14Q12349 124 aa2.11□□□□□ -2.07
SWD3YBR175W SLO1Q3E784 85 aa2.11□□□□□ -2.07
SWD3YBR175W TIR1P10863 254 aa2.1□□□□□ -2.07
SWD3YBR175W NSP1P14907 823 aaKnown RBP2.1□□□□□ -2.07
SWD3YBR175W RSA4P25382 515 aaKnown RBP2.1□□□□□ -2.07
SWD3YBR175W SPT14P32363 452 aa2.1□□□□□ -2.07
SWD3YBR175W RPS1AP33442 255 aaKnown RBP2.1□□□□□ -2.07
SWD3YBR175W PTC1P35182 281 aa2.1□□□□□ -2.07
SWD3YBR175W PIR5P46999 287 aa2.1□□□□□ -2.07
SWD3YBR175W YGL193CP53097 103 aa2.1□□□□□ -2.07
SWD3YBR175W YGR039WP53225 103 aa2.1□□□□□ -2.07
SWD3YBR175W DIG2Q03373 323 aaKnown RBP2.1□□□□□ -2.07
SWD3YBR175W SDH7Q04401 133 aa2.1□□□□□ -2.07
SWD3YBR175W GAL83Q04739 417 aa2.1□□□□□ -2.07
SWD3YBR175W CNL1Q06333 122 aa2.1□□□□□ -2.07
SWD3YBR175W FYV12Q08559 129 aa2.1□□□□□ -2.07
SWD3YBR175W ATO3Q12359 275 aa2.1□□□□□ -2.07
SWD3YBR175W POR1P04840 283 aaKnown RBP2.09□□□□□ -2.07
SWD3YBR175W UMP1P38293 148 aa2.09□□□□□ -2.07
SWD3YBR175W RPS20P38701 121 aaKnown RBP2.09□□□□□ -2.07
SWD3YBR175W YHL026CP38740 315 aa2.09□□□□□ -2.07
SWD3YBR175W PGD1P40356 397 aa2.09□□□□□ -2.07
SWD3YBR175W GPI2P46961 280 aa2.09□□□□□ -2.07
SWD3YBR175W APS3P47064 194 aa2.09□□□□□ -2.07
SWD3YBR175W SBH1P52870 82 aa2.09□□□□□ -2.07
SWD3YBR175W SLM2P53955 656 aa2.09□□□□□ -2.07
SWD3YBR175W VPS28Q02767 242 aa2.09□□□□□ -2.07
SWD3YBR175W CGI121Q03705 181 aaKnown RBP2.09□□□□□ -2.07
SWD3YBR175W MRPS8Q03799 155 aa2.09□□□□□ -2.07
SWD3YBR175W IRA1P18963 3092 aa2.09□□□□□ -2.07
SWD3YBR175W DUR1,2P32528 1835 aaKnown RBP2.09□□□□□ -2.08
SWD3YBR175W GEA1P47102 1408 aaPredicted RBP2.08□□□□□ -2.08
SWD3YBR175W SRP21P32342 167 aa2.08□□□□□ -2.08
SWD3YBR175W MRP49P32388 137 aa2.08□□□□□ -2.08
SWD3YBR175W SNC2P33328 115 aa2.08□□□□□ -2.08
SWD3YBR175W YBR220CP38318 560 aa2.08□□□□□ -2.08
SWD3YBR175W HTD2P38790 280 aaKnown RBP2.08□□□□□ -2.08
SWD3YBR175W YHR180WP38868 163 aa2.08□□□□□ -2.08
SWD3YBR175W NSA2P40078 261 aaKnown RBP2.08□□□□□ -2.08
SWD3YBR175W YIL059CP40520 121 aa2.08□□□□□ -2.08
SWD3YBR175W YJL218WP40892 196 aaKnown RBP2.08□□□□□ -2.08
SWD3YBR175W MPC3P53311 146 aa2.08□□□□□ -2.08
SWD3YBR175W YKR005CQ02203 525 aa2.08□□□□□ -2.08
SWD3YBR175W YMR295CQ03559 197 aa2.08□□□□□ -2.08
SWD3YBR175W YDR114CQ04597 100 aa2.08□□□□□ -2.08
SWD3YBR175W NEJ1Q06148 342 aa2.08□□□□□ -2.08
SWD3YBR175W PRP11Q07350 266 aaPredicted RBP2.08□□□□□ -2.08
SWD3YBR175W SPC3Q12133 184 aa2.08□□□□□ -2.08
SWD3YBR175W RAD6P06104 172 aa2.07□□□□□ -2.08
SWD3YBR175W RPS23AP0CX29 145 aaKnown RBP2.07□□□□□ -2.08
SWD3YBR175W RPS23BP0CX30 145 aa2.07□□□□□ -2.08
SWD3YBR175W PHO13P19881 312 aa2.07□□□□□ -2.08
SWD3YBR175W MRPL24P36525 258 aaPredicted RBP2.07□□□□□ -2.08
SWD3YBR175W TRS20P38334 175 aa2.07□□□□□ -2.08
SWD3YBR175W SPC25P40014 221 aa2.07□□□□□ -2.08
SWD3YBR175W YER137CP40083 148 aaKnown RBP2.07□□□□□ -2.08
SWD3YBR175W CUP9P41817 306 aa2.07□□□□□ -2.08
SWD3YBR175W DOC1P53068 250 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms