RNA–Protein interactions for RNA: YBR103W

SIF2, Transcript of WD40 repeat-containing subunit of Set3C histone deacetylase complex, yeast

Gene SIF2, Length 1,608 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIF2	YBR103W	POP1	P41812	875 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	YGL235W	P53071	178 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	TPC1	P53257	314 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	DUG3	P53871	357 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	NUP53	Q03790	475 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	PAM18	Q07914	168 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	GRE1	Q08969	168 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	MCT1	Q12283	360 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	ISD11	Q6Q560	94 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	YSF3	P0C074	85 aa	Predicted RBP	4.24	□□□□□ -1.73
SIF2	YBR103W	RPS28B	P0C0X0	67 aa	Known RBP	4.24	□□□□□ -1.73
SIF2	YBR103W	RPL20A	P0CX23	172 aa	Known RBP	4.24	□□□□□ -1.73
SIF2	YBR103W	RPL20B	P0CX24	172 aa	Predicted RBP	4.24	□□□□□ -1.73
SIF2	YBR103W	DPM1	P14020	267 aa	Known RBP	4.24	□□□□□ -1.73
SIF2	YBR103W	MCK1	P21965	375 aa	Known RBP	4.24	□□□□□ -1.73
SIF2	YBR103W	GPI12	P23797	304 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	MOH1	P38191	138 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	RPS20	P38701	121 aa	Known RBP	4.24	□□□□□ -1.73
SIF2	YBR103W	YFL065C	P43539	102 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	HIT1	P46973	164 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	MTM1	P53320	366 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	RHO5	P53879	331 aa	Known RBP	4.24	□□□□□ -1.73
SIF2	YBR103W	YDR209C	Q03480	137 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	COQ11	Q05892	277 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	YPR098C	Q06089	161 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	LDS2	Q08218	356 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	YPR203W	Q08994	102 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	YPL162C	Q12042	273 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	YOR015W	Q12169	119 aa		4.24	□□□□□ -1.73
SIF2	YBR103W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.24	□□□□□ -1.73
SIF2	YBR103W	GAS1	P22146	559 aa	Known RBP	4.23	□□□□□ -1.73
SIF2	YBR103W	TRR1	P29509	319 aa	Known RBP	4.23	□□□□□ -1.73
SIF2	YBR103W	MKK1	P32490	508 aa		4.23	□□□□□ -1.73
SIF2	YBR103W	TOA2	P32774	122 aa		4.23	□□□□□ -1.73
SIF2	YBR103W	ZRT1	P32804	376 aa		4.23	□□□□□ -1.73
SIF2	YBR103W	PPZ2	P33329	710 aa		4.23	□□□□□ -1.73
SIF2	YBR103W	UMP1	P38293	148 aa		4.23	□□□□□ -1.73
SIF2	YBR103W	YNL198C	P40166	100 aa		4.23	□□□□□ -1.73
SIF2	YBR103W	HAC1	P41546	238 aa		4.23	□□□□□ -1.73
SIF2	YBR103W	SFH5	P47008	294 aa		4.23	□□□□□ -1.73
SIF2	YBR103W	YGL260W	P53056	76 aa		4.23	□□□□□ -1.73
SIF2	YBR103W	MRPL1	Q04599	285 aa		4.23	□□□□□ -1.73
SIF2	YBR103W	YMR252C	Q04814	134 aa		4.23	□□□□□ -1.73
SIF2	YBR103W	ELP6	Q04868	273 aa		4.23	□□□□□ -1.73
SIF2	YBR103W	YRA1	Q12159	226 aa	Known RBP	4.23	□□□□□ -1.73
SIF2	YBR103W	MRPL23	Q12487	163 aa	Predicted RBP	4.23	□□□□□ -1.73
SIF2	YBR103W	POR1	P04840	283 aa	Known RBP	4.22	□□□□□ -1.73
SIF2	YBR103W	URA5	P13298	226 aa	Known RBP	4.22	□□□□□ -1.73
SIF2	YBR103W	FCY2	P17064	533 aa		4.22	□□□□□ -1.73
SIF2	YBR103W	YKL071W	P36086	256 aa		4.22	□□□□□ -1.73
SIF2	YBR103W	OM14	P38325	134 aa		4.22	□□□□□ -1.73
SIF2	YBR103W	SLM6	P38343	150 aa		4.22	□□□□□ -1.73
SIF2	YBR103W	YEA4	P40004	342 aa		4.22	□□□□□ -1.73
SIF2	YBR103W	CIN2	P46670	268 aa		4.22	□□□□□ -1.73
SIF2	YBR103W	CAB4	P53332	305 aa		4.22	□□□□□ -1.73
SIF2	YBR103W	TAD3	Q9URQ3	322 aa		4.22	□□□□□ -1.73
SIF2	YBR103W	ADK1	P07170	222 aa	Known RBP	4.21	□□□□□ -1.73
SIF2	YBR103W	PAU1	P0CE88	120 aa		4.21	□□□□□ -1.73
SIF2	YBR103W	PAU14	P0CE89	120 aa		4.21	□□□□□ -1.73
SIF2	YBR103W	PAU6	P0CE90	120 aa		4.21	□□□□□ -1.73
SIF2	YBR103W	PAU18	P0CE91	120 aa		4.21	□□□□□ -1.73
SIF2	YBR103W	PAU8	P0CE92	120 aa		4.21	□□□□□ -1.73
SIF2	YBR103W	PAU11	P0CE93	120 aa		4.21	□□□□□ -1.73
SIF2	YBR103W	MAK32	P23060	363 aa		4.21	□□□□□ -1.73
SIF2	YBR103W	PAU13	P38725	120 aa		4.21	□□□□□ -1.73
SIF2	YBR103W	PTH1	P38876	190 aa	Known RBP	4.21	□□□□□ -1.73
SIF2	YBR103W	PAU4	P53427	120 aa		4.21	□□□□□ -1.73
SIF2	YBR103W	PAU10	Q03050	120 aa		4.21	□□□□□ -1.73
SIF2	YBR103W	PAU20	Q08322	120 aa		4.21	□□□□□ -1.73
SIF2	YBR103W	PRM3	Q08931	133 aa		4.21	□□□□□ -1.73
SIF2	YBR103W	SME1	Q12330	94 aa	Predicted RBP	4.21	□□□□□ -1.73
SIF2	YBR103W	YIL102C-A	Q2V2P5	75 aa		4.21	□□□□□ -1.73
SIF2	YBR103W	PAU9	Q3E770	120 aa		4.21	□□□□□ -1.73
SIF2	YBR103W	RPL32	P38061	130 aa	Known RBP	4.21	□□□□□ -1.74
SIF2	YBR103W	ANS1	P38832	159 aa		4.21	□□□□□ -1.74
SIF2	YBR103W	ERG28	P40030	148 aa		4.21	□□□□□ -1.74
SIF2	YBR103W	UBP8	P50102	471 aa		4.21	□□□□□ -1.74
SIF2	YBR103W	YGL230C	P53074	147 aa		4.21	□□□□□ -1.74
SIF2	YBR103W	NCE101	Q02820	53 aa		4.21	□□□□□ -1.74
SIF2	YBR103W	AIM34	Q03673	198 aa		4.21	□□□□□ -1.74
SIF2	YBR103W	PRP46	Q12417	451 aa	Predicted RBP	4.21	□□□□□ -1.74
SIF2	YBR103W	COX9	P07255	59 aa		4.2	□□□□□ -1.74
SIF2	YBR103W	YGL010W	P25338	174 aa		4.2	□□□□□ -1.74
SIF2	YBR103W	RPL14A	P36105	138 aa	Known RBP	4.2	□□□□□ -1.74
SIF2	YBR103W	MRPL27	P36526	146 aa	Predicted RBP	4.2	□□□□□ -1.74
SIF2	YBR103W	YBR090C	P38253	122 aa		4.2	□□□□□ -1.74
SIF2	YBR103W	FYV4	P38783	130 aa	Predicted RBP	4.2	□□□□□ -1.74
SIF2	YBR103W	YDL186W	P48568	277 aa		4.2	□□□□□ -1.74
SIF2	YBR103W	CRZ1	P53968	678 aa		4.2	□□□□□ -1.74
SIF2	YBR103W	YDL218W	Q07629	317 aa		4.2	□□□□□ -1.74
SIF2	YBR103W	RPL43A	P0CX25	92 aa	Known RBP	4.19	□□□□□ -1.74
SIF2	YBR103W	RPL43B	P0CX26	92 aa		4.19	□□□□□ -1.74
SIF2	YBR103W	YKL070W	P36087	169 aa		4.19	□□□□□ -1.74
SIF2	YBR103W	YKR070W	P36151	352 aa	Known RBP	4.19	□□□□□ -1.74
SIF2	YBR103W	YER076C	P40049	302 aa		4.19	□□□□□ -1.74
SIF2	YBR103W	YER134C	P40081	178 aa		4.19	□□□□□ -1.74
SIF2	YBR103W	YIL059C	P40520	121 aa		4.19	□□□□□ -1.74
SIF2	YBR103W	ABF2	Q02486	183 aa		4.19	□□□□□ -1.74
SIF2	YBR103W	FSH2	Q05015	223 aa		4.19	□□□□□ -1.74
SIF2	YBR103W	YDL211C	Q12121	372 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 74.9 ms