RNA–Protein interactions for RNA: YBL056W

PTC3, Transcript of Type 2C protein phosphatase (PP2C), yeast

Gene PTC3, Length 1,407 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTC3	YBL056W	YKL075C	P36083	450 aa		5.01	□□□□□ -1.61
PTC3	YBL056W	PRY2	P36110	329 aa		5.01	□□□□□ -1.61
PTC3	YBL056W	AVT5	P38176	459 aa		5.01	□□□□□ -1.61
PTC3	YBL056W	RRT1	P38192	103 aa		5.01	□□□□□ -1.61
PTC3	YBL056W	SNN1	P48232	102 aa		5.01	□□□□□ -1.61
PTC3	YBL056W	CPD1	P53314	239 aa		5.01	□□□□□ -1.61
PTC3	YBL056W	TMA23	Q03525	211 aa		5.01	□□□□□ -1.61
PTC3	YBL056W	YLR122C	Q12312	125 aa		5.01	□□□□□ -1.61
PTC3	YBL056W	LAS17	Q12446	633 aa		5.01	□□□□□ -1.61
PTC3	YBL056W	YER190C-B	P0CX94	160 aa		5	□□□□□ -1.61
PTC3	YBL056W	YEL077W-A	P0CX95	160 aa		5	□□□□□ -1.61
PTC3	YBL056W	YGR296C-B	P0CX96	160 aa		5	□□□□□ -1.61
PTC3	YBL056W	YPL283W-B	P0CX97	160 aa		5	□□□□□ -1.61
PTC3	YBL056W	YPR204C-A	P0CX98	160 aa		5	□□□□□ -1.61
PTC3	YBL056W	YFL068W	P0CX99	160 aa		5	□□□□□ -1.61
PTC3	YBL056W	YLL066W-A	P0CY00	160 aa		5	□□□□□ -1.61
PTC3	YBL056W	YLL067W-A	P0CY01	160 aa		5	□□□□□ -1.61
PTC3	YBL056W	MSK1	P32048	576 aa		5	□□□□□ -1.61
PTC3	YBL056W	DER1	P38307	211 aa		5	□□□□□ -1.61
PTC3	YBL056W	SHG1	P38337	142 aa		5	□□□□□ -1.61
PTC3	YBL056W	MIC12	P38341	106 aa		5	□□□□□ -1.61
PTC3	YBL056W	PTC7	P38797	343 aa		5	□□□□□ -1.61
PTC3	YBL056W	RIB4	P50861	169 aa	Predicted RBP	5	□□□□□ -1.61
PTC3	YBL056W	TOS8	P53147	276 aa		5	□□□□□ -1.61
PTC3	YBL056W	SDO1	Q07953	250 aa	Known RBP	5	□□□□□ -1.61
PTC3	YBL056W	MRPL23	Q12487	163 aa	Predicted RBP	5	□□□□□ -1.61
PTC3	YBL056W	CYC3	P06182	269 aa		4.99	□□□□□ -1.61
PTC3	YBL056W	CDC7	P06243	507 aa		4.99	□□□□□ -1.61
PTC3	YBL056W	POP5	P28005	173 aa		4.99	□□□□□ -1.61
PTC3	YBL056W	YKL102C	P34249	101 aa		4.99	□□□□□ -1.61
PTC3	YBL056W	SAS2	P40963	338 aa		4.99	□□□□□ -1.61
PTC3	YBL056W	SMD3	P43321	101 aa	Known RBP	4.99	□□□□□ -1.61
PTC3	YBL056W	ATG27	P46989	271 aa		4.99	□□□□□ -1.61
PTC3	YBL056W	YDL186W	P48568	277 aa		4.99	□□□□□ -1.61
PTC3	YBL056W	CAF40	P53829	373 aa		4.99	□□□□□ -1.61
PTC3	YBL056W	ERV25	P54837	211 aa	Known RBP	4.99	□□□□□ -1.61
PTC3	YBL056W	YMR181C	Q03231	154 aa		4.99	□□□□□ -1.61
PTC3	YBL056W	ORM2	Q06144	216 aa		4.99	□□□□□ -1.61
PTC3	YBL056W	MED7	Q08278	222 aa		4.99	□□□□□ -1.61
PTC3	YBL056W	VMA9	Q3E7B6	73 aa		4.99	□□□□□ -1.61
PTC3	YBL056W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
PTC3	YBL056W	YHR213W	P0CI67	198 aa		4.98	□□□□□ -1.61
PTC3	YBL056W	RPL14A	P36105	138 aa	Known RBP	4.98	□□□□□ -1.61
PTC3	YBL056W	RPL14B	P38754	138 aa	Known RBP	4.98	□□□□□ -1.61
PTC3	YBL056W	PET100	P38958	111 aa		4.98	□□□□□ -1.61
PTC3	YBL056W	GLE2	P40066	365 aa		4.98	□□□□□ -1.61
PTC3	YBL056W	YNL194C	P40169	301 aa		4.98	□□□□□ -1.61
PTC3	YBL056W	YJL027C	P47063	138 aa	Predicted RBP	4.98	□□□□□ -1.61
PTC3	YBL056W	CAB4	P53332	305 aa		4.98	□□□□□ -1.61
PTC3	YBL056W	HST4	P53688	370 aa		4.98	□□□□□ -1.61
PTC3	YBL056W	TIM18	Q08749	192 aa		4.98	□□□□□ -1.61
PTC3	YBL056W	MRP2	P10663	115 aa	Predicted RBP	4.97	□□□□□ -1.61
PTC3	YBL056W	ALK2	P32789	676 aa	Predicted RBP	4.97	□□□□□ -1.61
PTC3	YBL056W	SFT2	P38166	215 aa		4.97	□□□□□ -1.61
PTC3	YBL056W	IMD2	P38697	523 aa	Known RBP	4.97	□□□□□ -1.61
PTC3	YBL056W	SNU13	P39990	126 aa	Known RBP	4.97	□□□□□ -1.61
PTC3	YBL056W	RTS2	P40962	232 aa		4.97	□□□□□ -1.61
PTC3	YBL056W	RPA43	P46669	326 aa		4.97	□□□□□ -1.61
PTC3	YBL056W	MCM22	P47167	239 aa		4.97	□□□□□ -1.61
PTC3	YBL056W	ATC1	Q04005	294 aa		4.97	□□□□□ -1.61
PTC3	YBL056W	SDH7	Q04401	133 aa		4.97	□□□□□ -1.61
PTC3	YBL056W	AYT1	Q12226	474 aa		4.97	□□□□□ -1.61
PTC3	YBL056W	YGR035W-A	Q45U48	73 aa		4.97	□□□□□ -1.61
PTC3	YBL056W	Q0142	Q9ZZW4	58 aa		4.97	□□□□□ -1.61
PTC3	YBL056W	YKL069W	P36088	180 aa		4.97	□□□□□ -1.61
PTC3	YBL056W	AGE2	P40529	298 aa		4.97	□□□□□ -1.61
PTC3	YBL056W	IMP2	P46972	177 aa		4.97	□□□□□ -1.61
PTC3	YBL056W	DSK2	P48510	373 aa		4.97	□□□□□ -1.61
PTC3	YBL056W	PAU4	P53427	120 aa		4.97	□□□□□ -1.61
PTC3	YBL056W	PRM3	Q08931	133 aa		4.97	□□□□□ -1.61
PTC3	YBL056W	SME1	Q12330	94 aa	Predicted RBP	4.97	□□□□□ -1.61
PTC3	YBL056W	CYC7	P00045	113 aa		4.96	□□□□□ -1.62
PTC3	YBL056W	LDS1	P31379	325 aa		4.96	□□□□□ -1.62
PTC3	YBL056W	ACP1	P32463	125 aa		4.96	□□□□□ -1.62
PTC3	YBL056W	ECM25	P32525	599 aa		4.96	□□□□□ -1.62
PTC3	YBL056W	SRB6	P32570	121 aa		4.96	□□□□□ -1.62
PTC3	YBL056W	RIB5	P38145	238 aa		4.96	□□□□□ -1.62
PTC3	YBL056W	LSM2	P38203	95 aa	Known RBP	4.96	□□□□□ -1.62
PTC3	YBL056W	POR2	P40478	281 aa		4.96	□□□□□ -1.62
PTC3	YBL056W	LOC1	P43586	204 aa	Predicted RBP	4.96	□□□□□ -1.62
PTC3	YBL056W	YNR071C	P53757	342 aa		4.96	□□□□□ -1.62
PTC3	YBL056W	OCA2	P53949	197 aa		4.96	□□□□□ -1.62
PTC3	YBL056W	PAU1	P0CE88	120 aa		4.95	□□□□□ -1.62
PTC3	YBL056W	PAU14	P0CE89	120 aa		4.95	□□□□□ -1.62
PTC3	YBL056W	PAU6	P0CE90	120 aa		4.95	□□□□□ -1.62
PTC3	YBL056W	PAU18	P0CE91	120 aa		4.95	□□□□□ -1.62
PTC3	YBL056W	PAU8	P0CE92	120 aa		4.95	□□□□□ -1.62
PTC3	YBL056W	PAU11	P0CE93	120 aa		4.95	□□□□□ -1.62
PTC3	YBL056W	YHR212W-A	P0CX91	67 aa		4.95	□□□□□ -1.62
PTC3	YBL056W	RPS2	P25443	254 aa	Known RBP	4.95	□□□□□ -1.62
PTC3	YBL056W	RPS0A	P32905	252 aa	Known RBP	4.95	□□□□□ -1.62
PTC3	YBL056W	ICS2	P38284	255 aa		4.95	□□□□□ -1.62
PTC3	YBL056W	TRS20	P38334	175 aa		4.95	□□□□□ -1.62
PTC3	YBL056W	PAU13	P38725	120 aa		4.95	□□□□□ -1.62
PTC3	YBL056W	PAU10	Q03050	120 aa		4.95	□□□□□ -1.62
PTC3	YBL056W	PAU20	Q08322	120 aa		4.95	□□□□□ -1.62
PTC3	YBL056W	YPR013C	Q12145	317 aa		4.95	□□□□□ -1.62
PTC3	YBL056W	ERV2	Q12284	196 aa		4.95	□□□□□ -1.62
PTC3	YBL056W	PAU9	Q3E770	120 aa		4.95	□□□□□ -1.62
PTC3	YBL056W	RPL11A	P0C0W9	174 aa	Known RBP	4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms