RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W BUD23P25627 275 aaPredicted RBP1.6□□□□□ -2.15
VPS8YAL002W OM14P38325 134 aa1.6□□□□□ -2.15
VPS8YAL002W YNL200CP40165 246 aaKnown RBP1.6□□□□□ -2.15
VPS8YAL002W TIF34P40217 347 aaKnown RBP1.6□□□□□ -2.15
VPS8YAL002W YPL039WQ03080 316 aa1.6□□□□□ -2.15
VPS8YAL002W INP1Q03694 420 aa1.6□□□□□ -2.15
VPS8YAL002W YPL247CQ12523 523 aa1.6□□□□□ -2.15
VPS8YAL002W DFM1Q12743 341 aaKnown RBP1.6□□□□□ -2.15
VPS8YAL002W ADH3P07246 375 aaKnown RBP1.6□□□□□ -2.15
VPS8YAL002W ATP5P09457 212 aa1.6□□□□□ -2.15
VPS8YAL002W CCA1P21269 546 aa1.6□□□□□ -2.15
VPS8YAL002W ZRT3P34240 503 aa1.6□□□□□ -2.15
VPS8YAL002W SHB17P36136 271 aaKnown RBP1.6□□□□□ -2.15
VPS8YAL002W YHL026CP38740 315 aa1.6□□□□□ -2.15
VPS8YAL002W ASP1P38986 381 aaPredicted RBP1.6□□□□□ -2.15
VPS8YAL002W AIM2P39721 246 aa1.6□□□□□ -2.15
VPS8YAL002W FIP1P45976 327 aa1.6□□□□□ -2.15
VPS8YAL002W PAC10P48363 199 aa1.6□□□□□ -2.15
VPS8YAL002W VPS28Q02767 242 aa1.6□□□□□ -2.15
VPS8YAL002W YMR099CQ03161 297 aaKnown RBP1.6□□□□□ -2.15
VPS8YAL002W GAS3Q03655 524 aa1.6□□□□□ -2.15
VPS8YAL002W API2Q04413 109 aa1.6□□□□□ -2.15
VPS8YAL002W MCP1Q12106 302 aa1.6□□□□□ -2.15
VPS8YAL002W GEP5Q12393 293 aa1.6□□□□□ -2.15
VPS8YAL002W CCH1P50077 2039 aa1.6□□□□□ -2.15
VPS8YAL002W SKG1P36169 355 aa1.6□□□□□ -2.15
VPS8YAL002W MRPL17P36528 281 aa1.6□□□□□ -2.15
VPS8YAL002W BAT1P38891 393 aaKnown RBP1.6□□□□□ -2.15
VPS8YAL002W SER2P42941 309 aa1.6□□□□□ -2.15
VPS8YAL002W IGD1P43598 195 aa1.6□□□□□ -2.15
VPS8YAL002W TAD3Q9URQ3 322 aa1.6□□□□□ -2.15
VPS8YAL002W REP2P03872 296 aa1.59□□□□□ -2.15
VPS8YAL002W TIR1P10863 254 aa1.59□□□□□ -2.15
VPS8YAL002W PRE7P23724 241 aaKnown RBP1.59□□□□□ -2.15
VPS8YAL002W YBR220CP38318 560 aa1.59□□□□□ -2.15
VPS8YAL002W AVT2P39981 480 aa1.59□□□□□ -2.15
VPS8YAL002W YIL054WP40524 105 aa1.59□□□□□ -2.15
VPS8YAL002W GVP36P40531 326 aaKnown RBP1.59□□□□□ -2.15
VPS8YAL002W YLR179CQ06252 201 aaKnown RBP1.59□□□□□ -2.15
VPS8YAL002W PSF1Q12488 208 aa1.59□□□□□ -2.15
VPS8YAL002W YBL010CP32788 280 aa1.59□□□□□ -2.15
VPS8YAL002W MSA2P36157 363 aa1.59□□□□□ -2.15
VPS8YAL002W YER134CP40081 178 aa1.59□□□□□ -2.15
VPS8YAL002W GLR1P41921 483 aaKnown RBP1.59□□□□□ -2.15
VPS8YAL002W AIF1P52923 378 aa1.59□□□□□ -2.15
VPS8YAL002W YGR219WP53307 113 aa1.59□□□□□ -2.15
VPS8YAL002W ALG9P53868 555 aaKnown RBP1.59□□□□□ -2.15
VPS8YAL002W APJ1P53940 528 aa1.59□□□□□ -2.15
VPS8YAL002W YNL033WP53964 284 aa1.59□□□□□ -2.15
VPS8YAL002W YNL019CP53975 284 aa1.59□□□□□ -2.15
VPS8YAL002W TMA23Q03525 211 aa1.59□□□□□ -2.15
VPS8YAL002W YDR391CQ04170 232 aa1.59□□□□□ -2.15
VPS8YAL002W SPG3Q04398 127 aaPredicted RBP1.59□□□□□ -2.15
VPS8YAL002W ECM19Q06011 112 aa1.59□□□□□ -2.15
VPS8YAL002W SLD7Q08457 257 aa1.59□□□□□ -2.15
VPS8YAL002W FCY1Q12178 158 aa1.59□□□□□ -2.15
VPS8YAL002W YLR118CQ12354 227 aa1.59□□□□□ -2.15
VPS8YAL002W ISD11Q6Q560 94 aa1.59□□□□□ -2.15
VPS8YAL002W FKS1P38631 1876 aaKnown RBP1.59□□□□□ -2.16
VPS8YAL002W SGA1P08019 549 aa1.59□□□□□ -2.16
VPS8YAL002W YPR170W-BP0C5R9 85 aa1.59□□□□□ -2.16
VPS8YAL002W YRA2P36036 203 aaKnown RBP RIP-Chip data1.59□□□□□ -2.16not detected
VPS8YAL002W YAR068WP39564 161 aa1.59□□□□□ -2.16
VPS8YAL002W FIS1P40515 155 aa1.59□□□□□ -2.16
VPS8YAL002W GPI2P46961 280 aa1.59□□□□□ -2.16
VPS8YAL002W RPS12P48589 143 aaKnown RBP1.59□□□□□ -2.16
VPS8YAL002W YGL118CP53132 145 aa1.59□□□□□ -2.16
VPS8YAL002W AIM11P87275 137 aa1.59□□□□□ -2.16
VPS8YAL002W YPL264CQ08980 353 aa1.59□□□□□ -2.16
VPS8YAL002W YLR156WP0CE96 114 aa1.58□□□□□ -2.16
VPS8YAL002W YLR159WP0CE97 114 aa1.58□□□□□ -2.16
VPS8YAL002W YLR161WP0CE98 114 aa1.58□□□□□ -2.16
VPS8YAL002W SPT15P13393 240 aaKnown RBP1.58□□□□□ -2.16
VPS8YAL002W ATP15P21306 62 aa1.58□□□□□ -2.16
VPS8YAL002W SRP21P32342 167 aa1.58□□□□□ -2.16
VPS8YAL002W VMA11P32842 164 aa1.58□□□□□ -2.16
VPS8YAL002W SUI1P32911 108 aaKnown RBP1.58□□□□□ -2.16
VPS8YAL002W YBL081WP38180 368 aaKnown RBP1.58□□□□□ -2.16
VPS8YAL002W TRS20P38334 175 aa1.58□□□□□ -2.16
VPS8YAL002W YPT31P38555 223 aaKnown RBP1.58□□□□□ -2.16
VPS8YAL002W YFL019CP43576 117 aa1.58□□□□□ -2.16
VPS8YAL002W OSH6Q02201 448 aa1.58□□□□□ -2.16
VPS8YAL002W YMR244WQ04018 355 aa1.58□□□□□ -2.16
VPS8YAL002W YTH1Q06102 208 aaPredicted RBP1.58□□□□□ -2.16
VPS8YAL002W YPR114WQ06107 315 aa1.58□□□□□ -2.16
VPS8YAL002W NAT3Q06504 195 aa1.58□□□□□ -2.16
VPS8YAL002W SRL1Q08673 210 aa1.58□□□□□ -2.16
VPS8YAL002W PST1Q12355 444 aa1.58□□□□□ -2.16
VPS8YAL002W YNL277W-AQ3E7Z0 62 aa1.58□□□□□ -2.16
VPS8YAL002W UBR2Q07963 1872 aa1.58□□□□□ -2.16
VPS8YAL002W YEL009C-AA0A023PZF2 135 aa1.58□□□□□ -2.16
VPS8YAL002W PHO13P19881 312 aa1.58□□□□□ -2.16
VPS8YAL002W RNP1P32385 249 aa1.58□□□□□ -2.16
VPS8YAL002W SNC2P33328 115 aa1.58□□□□□ -2.16
VPS8YAL002W RPL14AP36105 138 aaKnown RBP1.58□□□□□ -2.16
VPS8YAL002W GPI18P38211 433 aa1.58□□□□□ -2.16
VPS8YAL002W RPL14BP38754 138 aaKnown RBP1.58□□□□□ -2.16
VPS8YAL002W MIG3P39943 394 aa1.58□□□□□ -2.16
VPS8YAL002W YDL211CQ12121 372 aa1.58□□□□□ -2.16
VPS8YAL002W SPC3Q12133 184 aa1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms