RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 H3BQF6 201 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 DGAT1O75907 488 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 GNA14O95837 355 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 FBXO45P0C2W1 286 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 GNAT1P11488 350 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 CCT5P48643 541 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 POLGP54098 1239 aaPredicted RBP12.32□□□□□ -0.44
LINC00538-201ENST00000626109 ITGA7Q13683 1181 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 GALEQ14376 348 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 FAM117BQ6P1L5 589 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 PADI6Q6TGC4 694 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 AFAP1L2Q8N4X5 818 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 TPCN2Q8NHX9 752 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 GOLGA5Q8TBA6 731 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 SLC7A3Q8WY07 619 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 BAP1Q92560 729 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 ALPK1Q96QP1 1244 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 MMS19Q96T76 1030 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 JPH2Q9BR39 696 aaPredicted RBP12.32□□□□□ -0.44
LINC00538-201ENST00000626109 IQCGQ9H095 443 aaKnown RBP12.32□□□□□ -0.44
LINC00538-201ENST00000626109 CCDC113Q9H0I3 377 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 MMRN2Q9H8L6 949 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 KCND2Q9NZV8 630 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 PCDHA13Q9Y5I0 950 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 WDR81Q562E7 1941 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 LOXHD1Q8IVV2 1947 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 C17orf102A2RUQ5 167 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 TMCO5BA8MYB1 307 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 PDPK1O15530 556 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 DKK1O94907 266 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 LCA5LO95447 670 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 CCNCP24863 283 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 SOX5P35711 763 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 LMAN1P49257 510 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 HNRNPH2P55795 449 aaKnown RBP12.31□□□□□ -0.44
LINC00538-201ENST00000626109 FKBP3Q00688 224 aaKnown RBP12.31□□□□□ -0.44
LINC00538-201ENST00000626109 LMNB2Q03252 620 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 ITIH3Q06033 890 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 TARBP2Q15633 366 aaKnown RBP12.31□□□□□ -0.44
LINC00538-201ENST00000626109 COL13A1Q5TAT6 717 aaPredicted RBP12.31□□□□□ -0.44
LINC00538-201ENST00000626109 RINT1Q6NUQ1 792 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 NFRKBQ6P4R8 1299 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 FAM47EQ6ZV65 393 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 CACNA2D4Q7Z3S7 1137 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 MYOCDQ8IZQ8 938 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 DCLK2Q8N568 766 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 CCDC155Q8N6L0 562 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 NEK11Q8NG66 645 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 BRSK1Q8TDC3 778 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 PPM1MQ96MI6 270 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 ATP6V0A4Q9HBG4 840 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 SETD4Q9NVD3 440 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 HDAC6Q9UBN7 1215 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 ADAMTS1Q9UHI8 967 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 MACROD2A1Z1Q3 448 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 MAGEB2O15479 319 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 PPFIA2O75334 1257 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 SKAP2O75563 359 aaPredicted RBP12.31□□□□□ -0.44
LINC00538-201ENST00000626109 IVLP07476 585 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 TCP1P17987 556 aaKnown RBP12.31□□□□□ -0.44
LINC00538-201ENST00000626109 CYP11B2P19099 503 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 KLK7P49862 253 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 PTPN11Q06124 597 aaPredicted RBP12.31□□□□□ -0.44
LINC00538-201ENST00000626109 DYMQ7RTS9 669 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 SESTD1Q86VW0 696 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 MCPH1Q8NEM0 835 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 LMBR1Q8WVP7 490 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 TRAPPC12Q8WVT3 735 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 CCT6BQ92526 530 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 CAPZA3Q96KX2 299 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 C1orf74Q96LT6 269 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 TCHPQ9BT92 498 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 RUSC1Q9BVN2 902 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 LACRTQ9GZZ8 138 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 TSPYL1Q9H0U9 437 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 FBRSQ9HAH7 460 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 SCHIP1Q9P0W5 487 aaPredicted RBP12.31□□□□□ -0.44
LINC00538-201ENST00000626109 SIK3Q9Y2K2 1263 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 SCN10AQ9Y5Y9 1956 aa12.31□□□□□ -0.44
LINC00538-201ENST00000626109 SSU72P8A0A1W2PR75 194 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 ZBTB42B2RXF5 422 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 KLHL41O60662 606 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 GARTP22102 1010 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 ACTN2P35609 894 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 CD86P42081 329 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 TNNT3P45378 269 aaPredicted RBP12.3□□□□□ -0.44
LINC00538-201ENST00000626109 KIF11P52732 1056 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 MPP1Q00013 466 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 EMC2Q15006 297 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 ZSCAN26Q16670 478 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 C1orf186Q6ZWK4 172 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 CCDC65Q8IXS2 484 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 VPS52Q8N1B4 723 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 RNF10Q8N5U6 811 aaKnown RBP12.3□□□□□ -0.44
LINC00538-201ENST00000626109 PPP1R13LQ8WUF5 828 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 SYN2Q92777 582 aaPredicted RBP12.3□□□□□ -0.44
LINC00538-201ENST00000626109 NACC2Q96BF6 587 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 EEF2KMTQ96G04 330 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 TIPINQ9BVW5 301 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 SENP6Q9GZR1 1112 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms