RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 ERO1BQ86YB8 467 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 DDIASQ8IXT1 998 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 MDM1Q8TC05 714 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 ASAP3Q8TDY4 903 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 FUT8Q9BYC5 575 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 PXMP2Q9NR77 195 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 USP15Q9Y4E8 981 aaPredicted RBP13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 RRN3P2A6NIE6 340 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 PDHA1P08559 390 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 NCAM1P13591 858 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 GARTP22102 1010 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 RAD51Q06609 339 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 EFTUD2Q15029 972 aaKnown RBP eCLIP13.08□□□□□ -0.323e-6■■□□□ 11.8
TNFAIP3-206ENST00000612899 GRIK5Q16478 980 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 RABGAP1LQ5R372 815 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 AGBL2Q5U5Z8 902 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 C4orf19Q8IY42 314 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 ARHGAP18Q8N392 663 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 SLC26A7Q8TE54 656 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 FOXP3Q9BZS1 431 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 OLFML3Q9NRN5 406 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 SLC38A7Q9NVC3 462 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 COL5A2P05997 1499 aaPredicted RBP13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 RNF103-CHMP3A0A140T963 221 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 RASSF10A6NK89 507 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 E2F6O75461 281 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 CELF2O95319 508 aaKnown RBP13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 ACADSBP45954 432 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 RARRES1P49788 294 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 ALDH18A1P54886 795 aaKnown RBP13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 USP10Q14694 798 aaKnown RBP13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 PCSK7Q16549 785 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 BOLA3Q53S33 107 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 ELMSAN1Q6PJG2 1045 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 SNX19Q92543 992 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 ZNF512Q96ME7 567 aaPredicted RBP13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 DCCP43146 1447 aa13.08□□□□□ -0.32
TNFAIP3-206ENST00000612899 MROH2AA6NES4 1674 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 TAF6P49848 677 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 CENPCQ03188 943 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 STX3Q13277 289 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 PAPD7Q5XG87 772 aaKnown RBP13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 PCNX4Q63HM2 1172 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 SZRD1Q7Z422 152 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 ACOT1Q86TX2 421 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 SLC47A2Q86VL8 602 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 ZNF710Q8N1W2 664 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 MTMR8Q96EF0 704 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 TRPV6Q9H1D0 765 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 DPP3Q9NY33 737 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 TMEM150BA6NC51 233 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 CFAP73A6NFT4 308 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 ANP32DO95626 131 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 OR1G1P47890 313 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 CAPRIN1Q14444 709 aaKnown RBP13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 PDK1Q15118 436 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 EFHC1Q5JVL4 640 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 KCNK18Q7Z418 384 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 ATP8B4Q8TF62 1192 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 PTPRN2Q92932 1015 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 FAM163AQ96GL9 167 aaPredicted RBP13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 DUSP9Q99956 384 aaKnown RBP13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 FAM167BQ9BTA0 163 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 PIDD1Q9HB75 910 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 AGO4Q9HCK5 861 aaKnown RBP13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 KCNH4Q9UQ05 1017 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 ACO1P21399 889 aaKnown RBP13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 FNTAP49354 379 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 FBXO25Q8TCJ0 367 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 GTF3C2Q8WUA4 911 aaPredicted RBP13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 SEPT5Q99719 369 aaPredicted RBP13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 ZFYVE28Q9HCC9 887 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 PRDM5Q9NQX1 630 aaPredicted RBP13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 BLOC1S4Q9NUP1 217 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 ZBTB39O15060 712 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 B3GAT3O94766 335 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 SLITRK3O94933 977 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 VTNP04004 478 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 ENO1P06733 434 aaKnown RBP13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 GZMAP12544 262 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 EPHB2P29323 1055 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 RAD23BP54727 409 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 DDR1Q08345 913 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 COL9A3Q14050 684 aaPredicted RBP13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 FAM83AQ86UY5 434 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 PARP9Q8IXQ6 854 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 TTC30BQ8N4P2 665 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 PPHLN1Q8NEY8 458 aaKnown RBP13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 CXorf38Q8TB03 319 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 ERP27Q96DN0 273 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 ROPN1BQ9BZX4 212 aaPredicted RBP13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 ROPN1Q9HAT0 212 aaPredicted RBP13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 UBQLN1Q9UMX0 589 aaKnown RBP13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 L1RE1Q9UN81 338 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 USP20Q9Y2K6 914 aa13.07□□□□□ -0.32
TNFAIP3-206ENST00000612899 ENO4A6NNW6 628 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 WNT10BO00744 389 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 FAM200BP0CF97 657 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms