RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 SCLT1Q96NL6 688 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 ADPGKQ9BRR6 497 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 EPC1Q9H2F5 836 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 TSPYL2Q9H2G4 693 aaPredicted RBP10.03□□□□□ -0.8
VPS25-205ENST00000590339 GOLPH3Q9H4A6 298 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 AVENQ9NQS1 362 aaPredicted RBP10.03□□□□□ -0.8
VPS25-205ENST00000590339 PADI3Q9ULW8 664 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 DERAQ9Y315 318 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 PCDHB4Q9Y5E5 795 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 TARSL2A2RTX5 802 aaKnown RBP10.02□□□□□ -0.81
VPS25-205ENST00000590339 DDX3YO15523 660 aaKnown RBP10.02□□□□□ -0.81
VPS25-205ENST00000590339 LPXNO60711 386 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 RPS6KA5O75582 802 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 CALCAP01258 141 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 RPLP2P05387 115 aaKnown RBP10.02□□□□□ -0.81
VPS25-205ENST00000590339 FGFR4P22455 802 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 GNA15P30679 374 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 ATICP31939 592 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 YWHAEP62258 255 aaKnown RBP10.02□□□□□ -0.81
VPS25-205ENST00000590339 C2orf54Q08AI8 447 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 TRPC3Q13507 836 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 RPS6KA1Q15418 735 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 PPP1R2P3Q6NXS1 205 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 WDR93Q6P2C0 686 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 SLC27A1Q6PCB7 646 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 TMEM270Q6UE05 265 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 MON1BQ7L1V2 547 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 PEX26Q7Z412 305 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 APBB1IPQ7Z5R6 666 aaPredicted RBP10.02□□□□□ -0.81
VPS25-205ENST00000590339 RASGEF1CQ8N431 466 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 FIBCD1Q8N539 461 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 FBXO22Q8NEZ5 403 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 RUBCNQ92622 972 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 ZNF653Q96CK0 615 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 FAM212AQ96EL1 285 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 TRIM11Q96F44 468 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 PBKQ96KB5 322 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 SNX27Q96L92 541 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 PNKPQ96T60 521 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 OSMRQ99650 979 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 PARD6BQ9BYG5 372 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 FAM124BQ9H5Z6 455 aaPredicted RBP10.02□□□□□ -0.81
VPS25-205ENST00000590339 ARGLU1Q9NWB6 273 aaPredicted RBP10.02□□□□□ -0.81
VPS25-205ENST00000590339 EHD2Q9NZN4 543 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 THEGQ9P2T0 379 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 UVRAGQ9P2Y5 699 aa10.02□□□□□ -0.81
VPS25-205ENST00000590339 PACSIN2Q9UNF0 486 aaPredicted RBP10.02□□□□□ -0.81
VPS25-205ENST00000590339 NOC2LQ9Y3T9 749 aaKnown RBP10.02□□□□□ -0.81
VPS25-205ENST00000590339 CCDC151A5D8V7 595 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 CSPG5O95196 566 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 ZRANB2O95218 330 aaKnown RBP eCLIP10.01□□□□□ -0.81
VPS25-205ENST00000590339 NPTXRO95502 500 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 TUBBP07437 444 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 MYBL1P10243 752 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 EIF4BP23588 611 aaKnown RBP10.01□□□□□ -0.81
VPS25-205ENST00000590339 CXCR5P32302 372 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 CDH5P33151 784 aaPredicted RBP10.01□□□□□ -0.81
VPS25-205ENST00000590339 CRYBB1P53674 252 aaPredicted RBP10.01□□□□□ -0.81
VPS25-205ENST00000590339 MRPS5P82675 430 aaKnown RBP10.01□□□□□ -0.81
VPS25-205ENST00000590339 TFF2Q03403 129 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 PTP4A2Q12974 167 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 BTG3Q14201 252 aaPredicted RBP10.01□□□□□ -0.81
VPS25-205ENST00000590339 TMEM132DQ14C87 1099 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 BRD3Q15059 726 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 CFAP221Q4G0U5 840 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 NOTUMQ6P988 496 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 CATSPER4Q7RTX7 472 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 DAAM2Q86T65 1068 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 PHF13Q86YI8 300 aaPredicted RBP10.01□□□□□ -0.81
VPS25-205ENST00000590339 MCOLN2Q8IZK6 566 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 SPATA4Q8NEY3 305 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 ZNF564Q8TBZ8 553 aaPredicted RBP10.01□□□□□ -0.81
VPS25-205ENST00000590339 ACTRT1Q8TDG2 376 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 TMEM40Q8WWA1 233 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 LINC01599Q8WXQ3 324 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 CD101Q93033 1021 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 ACAP3Q96P50 834 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 ASB2Q96Q27 587 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 PSMB7Q99436 277 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 ZSWIM1Q9BR11 485 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 CCDC94Q9BW85 323 aaPredicted RBP10.01□□□□□ -0.81
VPS25-205ENST00000590339 FTHL17Q9BXU8 183 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 SDCBP2Q9H190 292 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 PLEKHA5Q9HAU0 1116 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 CISHQ9NSE2 258 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 ZNF446Q9NWS9 450 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 SMARCAL1Q9NZC9 954 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 CTTNBP2NLQ9P2B4 639 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 TMEM59LQ9UK28 342 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 AMFRQ9UKV5 643 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 ITGA11Q9UKX5 1188 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 TTC7AQ9ULT0 858 aaPredicted RBP10.01□□□□□ -0.81
VPS25-205ENST00000590339 PCDHGC3Q9UN70 934 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 POLIQ9UNA4 740 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 ST3GAL5Q9UNP4 418 aa10.01□□□□□ -0.81
VPS25-205ENST00000590339 MIF4GDA9UHW6 222 aaKnown RBP10□□□□□ -0.81
VPS25-205ENST00000590339 TULP1O00294 542 aaPredicted RBP10□□□□□ -0.81
VPS25-205ENST00000590339 KCNK3O14649 394 aa10□□□□□ -0.81
VPS25-205ENST00000590339 GPR182O15218 404 aa10□□□□□ -0.81
VPS25-205ENST00000590339 ATMINO43313 823 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms