RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ASPAP45381 313 aa20.91■□□□□ 0.94
CIRBP-220ENST00000588917 CDH8P55286 799 aa20.91■□□□□ 0.94
CIRBP-220ENST00000588917 UBXN1Q04323 297 aa20.91■□□□□ 0.94
CIRBP-220ENST00000588917 GPR17Q13304 367 aa20.91■□□□□ 0.94
CIRBP-220ENST00000588917 CUL2Q13617 745 aa20.91■□□□□ 0.94
CIRBP-220ENST00000588917 MAPRE1Q15691 268 aaKnown RBP20.91■□□□□ 0.94
CIRBP-220ENST00000588917 TRIM65Q6PJ69 517 aa20.91■□□□□ 0.94
CIRBP-220ENST00000588917 RTL10Q7L3V2 364 aa20.91■□□□□ 0.94
CIRBP-220ENST00000588917 APTXQ7Z2E3 356 aaKnown RBP20.91■□□□□ 0.94
CIRBP-220ENST00000588917 PPM1KQ8N3J5 372 aa20.91■□□□□ 0.94
CIRBP-220ENST00000588917 KBTBD7Q8WVZ9 684 aa20.91■□□□□ 0.94
CIRBP-220ENST00000588917 TNIP3Q96KP6 325 aa20.91■□□□□ 0.94
CIRBP-220ENST00000588917 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.91■□□□□ 0.942e-6■■■■■ 42.8
CIRBP-220ENST00000588917 PCDHGC5Q9Y5F6 944 aa20.91■□□□□ 0.94
CIRBP-220ENST00000588917 SCN1AP35498 2009 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 PER2O15055 1255 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 LRRN2O75325 713 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 GLUD1P00367 558 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 TPM3P06753 285 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 CPB1P15086 417 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 SLC9A1P19634 815 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 ELF1P32519 619 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 MFAP3P55082 362 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 LRMPQ12912 555 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 NFE2Q16621 373 aaPredicted RBP20.9■□□□□ 0.94
CIRBP-220ENST00000588917 SCARA5Q6ZMJ2 495 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 ADGRD2Q7Z7M1 963 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 PALB2Q86YC2 1186 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 EFHBQ8N7U6 833 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 RNF214Q8ND24 703 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 C2orf15Q8WU43 125 aaKnown RBP20.9■□□□□ 0.94
CIRBP-220ENST00000588917 MRPL45Q9BRJ2 306 aaKnown RBP20.9■□□□□ 0.94
CIRBP-220ENST00000588917 ZCWPW1Q9H0M4 648 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 PLEKHA4Q9H4M7 779 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 IGFLR1Q9H665 355 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 SMYD3Q9H7B4 428 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 RTN4Q9NQC3 1192 aaKnown RBP20.9■□□□□ 0.94
CIRBP-220ENST00000588917 APEX2Q9UBZ4 518 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 BARX2Q9UMQ3 279 aaPredicted RBP20.9■□□□□ 0.94
CIRBP-220ENST00000588917 DAAM1Q9Y4D1 1078 aa20.9■□□□□ 0.94
CIRBP-220ENST00000588917 ABLIM3O94929 683 aa20.89■□□□□ 0.93
CIRBP-220ENST00000588917 PDGFRBP09619 1106 aa20.89■□□□□ 0.93
CIRBP-220ENST00000588917 CLCN4P51793 760 aa20.89■□□□□ 0.93
CIRBP-220ENST00000588917 ARPP19P56211 112 aa20.89■□□□□ 0.93
CIRBP-220ENST00000588917 UBASH3AP57075 661 aa20.89■□□□□ 0.93
CIRBP-220ENST00000588917 FANCCQ00597 558 aa20.89■□□□□ 0.93
CIRBP-220ENST00000588917 ROR1Q01973 937 aa20.89■□□□□ 0.93
CIRBP-220ENST00000588917 INCA1Q0VD86 236 aa20.89■□□□□ 0.93
CIRBP-220ENST00000588917 HYAL1Q12794 435 aa20.89■□□□□ 0.93
CIRBP-220ENST00000588917 PHLDB3Q6NSJ2 640 aa20.89■□□□□ 0.93
CIRBP-220ENST00000588917 LILRA6Q6PI73 481 aa20.89■□□□□ 0.93
CIRBP-220ENST00000588917 RSPO2Q6UXX9 243 aaPredicted RBP20.89■□□□□ 0.93
CIRBP-220ENST00000588917 TMEM184AQ6ZMB5 413 aa20.89■□□□□ 0.93
CIRBP-220ENST00000588917 SLC22A17Q8WUG5 538 aa20.89■□□□□ 0.93
CIRBP-220ENST00000588917 CASP10Q92851 521 aa20.89■□□□□ 0.93
CIRBP-220ENST00000588917 C1QTNF1Q9BXJ1 281 aa20.89■□□□□ 0.93
CIRBP-220ENST00000588917 UBE2TQ9NPD8 197 aaPredicted RBP20.89■□□□□ 0.93
CIRBP-220ENST00000588917 PLCB1Q9NQ66 1216 aa20.89■□□□□ 0.93
CIRBP-220ENST00000588917 COL4A4P53420 1690 aaPredicted RBP20.89■□□□□ 0.93
CIRBP-220ENST00000588917 ATF2P15336 505 aa20.88■□□□□ 0.93
CIRBP-220ENST00000588917 RFX1P22670 979 aa20.88■□□□□ 0.93
CIRBP-220ENST00000588917 LMO2P25791 158 aa20.88■□□□□ 0.93
CIRBP-220ENST00000588917 KCNMA1Q12791 1236 aa20.88■□□□□ 0.93
CIRBP-220ENST00000588917 ADAM15Q13444 863 aa20.88■□□□□ 0.93
CIRBP-220ENST00000588917 NR1I3Q14994 352 aa20.88■□□□□ 0.93
CIRBP-220ENST00000588917 UVSSAQ2YD98 709 aa20.88■□□□□ 0.93
CIRBP-220ENST00000588917 OSTM1Q86WC4 334 aa20.88■□□□□ 0.93
CIRBP-220ENST00000588917 GLYCTKQ8IVS8 523 aa20.88■□□□□ 0.93
CIRBP-220ENST00000588917 CRYBG2Q8N1P7 616 aa20.88■□□□□ 0.93
CIRBP-220ENST00000588917 ELMO3Q96BJ8 720 aa20.88■□□□□ 0.93
CIRBP-220ENST00000588917 PCMTD1Q96MG8 357 aaPredicted RBP20.88■□□□□ 0.93
CIRBP-220ENST00000588917 ERGIC2Q96RQ1 377 aa20.88■□□□□ 0.93
CIRBP-220ENST00000588917 RTP3Q9BQQ7 232 aa20.88■□□□□ 0.93
CIRBP-220ENST00000588917 NT5C1AQ9BXI3 368 aa20.88■□□□□ 0.93
CIRBP-220ENST00000588917 SDCBP2Q9H190 292 aa20.88■□□□□ 0.93
CIRBP-220ENST00000588917 CISHQ9NSE2 258 aa20.88■□□□□ 0.93
CIRBP-220ENST00000588917 HSFX1Q9UBD0 423 aa20.88■□□□□ 0.93
CIRBP-220ENST00000588917 AFF4Q9UHB7 1163 aaKnown RBP20.88■□□□□ 0.93
CIRBP-220ENST00000588917 TCF20Q9UGU0 1960 aaKnown RBP20.87■□□□□ 0.93
CIRBP-220ENST00000588917 A0A1B0GTH6 734 aa20.87■□□□□ 0.93
CIRBP-220ENST00000588917 ADAM12O43184 909 aa20.87■□□□□ 0.93
CIRBP-220ENST00000588917 TGM5O43548 720 aa20.87■□□□□ 0.93
CIRBP-220ENST00000588917 PTPN1P18031 435 aaKnown RBP20.87■□□□□ 0.93
CIRBP-220ENST00000588917 CD58P19256 250 aa20.87■□□□□ 0.93
CIRBP-220ENST00000588917 RAP1GAPP47736 663 aa20.87■□□□□ 0.93
CIRBP-220ENST00000588917 NDST1P52848 882 aa20.87■□□□□ 0.93
CIRBP-220ENST00000588917 SLC39A12Q504Y0 691 aa20.87■□□□□ 0.93
CIRBP-220ENST00000588917 INTS6LQ5JSJ4 861 aaKnown RBP20.87■□□□□ 0.93
CIRBP-220ENST00000588917 C4orf50Q6ZRC1 276 aa20.87■□□□□ 0.93
CIRBP-220ENST00000588917 CCDC149Q6ZUS6 474 aa20.87■□□□□ 0.93
CIRBP-220ENST00000588917 RRAGAQ7L523 313 aa20.87■□□□□ 0.93
CIRBP-220ENST00000588917 OR10T2Q8NGX3 314 aa20.87■□□□□ 0.93
CIRBP-220ENST00000588917 SYT15Q9BQS2 421 aa20.87■□□□□ 0.93
CIRBP-220ENST00000588917 DZANK1Q9NVP4 752 aa20.87■□□□□ 0.93
CIRBP-220ENST00000588917 KIAA1257Q9ULG3 409 aa20.87■□□□□ 0.93
CIRBP-220ENST00000588917 HCFC2Q9Y5Z7 792 aa20.87■□□□□ 0.93
CIRBP-220ENST00000588917 WDR27A2RRH5 827 aa20.86■□□□□ 0.93
CIRBP-220ENST00000588917 CBFA2T2O43439 604 aa20.86■□□□□ 0.93
CIRBP-220ENST00000588917 CILPO75339 1184 aa20.86■□□□□ 0.93
CIRBP-220ENST00000588917 KCNC3Q14003 757 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms