RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CSRNP2Q9H175 543 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 PORCNQ9H237 461 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 CERS4Q9HA82 394 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 TXNRD2Q9NNW7 524 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 CNNM1Q9NRU3 951 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 USP40Q9NVE5 1235 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 CROTQ9UKG9 612 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 ZBTB21Q9ULJ3 1066 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 A0A0A6YYK5 440 aaPredicted RBP6.46□□□□□ -1.38
SF3B3-214ENST00000572365 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.46□□□□□ -1.38
SF3B3-214ENST00000572365 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.46□□□□□ -1.38
SF3B3-214ENST00000572365 NRP2O60462 931 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 PLA2G1BP04054 148 aaKnown RBP6.46□□□□□ -1.38
SF3B3-214ENST00000572365 CSF1RP07333 972 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 MYOGP15173 224 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 GLDCP23378 1020 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 RABGGTBP53611 331 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 NHLH1Q02575 133 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 MALLQ13021 153 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 HLTFQ14527 1009 aaKnown RBP eCLIP6.46□□□□□ -1.38
SF3B3-214ENST00000572365 ADRM1Q16186 407 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 FAM110CQ1W6H9 321 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 MINDY4Q4G0A6 757 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 EPHA10Q5JZY3 1008 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 WDR78Q5VTH9 848 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 LDHAL6AQ6ZMR3 332 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 C15orf52Q6ZUT6 534 aaKnown RBP6.46□□□□□ -1.38
SF3B3-214ENST00000572365 GAREM2Q75VX8 874 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 SCYL3Q8IZE3 742 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 MIER2Q8N344 545 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 FAM151AQ8WW52 585 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 KCNN1Q92952 543 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 FATE1Q969F0 183 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 CLIP3Q96DZ5 547 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 FDXACB1Q9BRP7 624 aaPredicted RBP6.46□□□□□ -1.38
SF3B3-214ENST00000572365 SOX7Q9BT81 388 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 PAGR1Q9BTK6 254 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 ACE2Q9BYF1 805 aaPredicted RBP6.46□□□□□ -1.38
SF3B3-214ENST00000572365 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.46□□□□□ -1.38
SF3B3-214ENST00000572365 GABBR1Q9UBS5 961 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 SCOCQ9UIL1 159 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 SYNPO2Q9UMS6 1093 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 AGTPBP1Q9UPW5 1226 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 LRRFIP2Q9Y608 721 aaKnown RBP6.46□□□□□ -1.38
SF3B3-214ENST00000572365 MYH2Q9UKX2 1941 aa6.46□□□□□ -1.38
SF3B3-214ENST00000572365 ZFHX2Q9C0A1 2572 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-214ENST00000572365 DCHS1Q96JQ0 3298 aa6.45□□□□□ -1.38
SF3B3-214ENST00000572365 A0A0G2JNJ9 132 aa6.45□□□□□ -1.38
SF3B3-214ENST00000572365 CCDC194A0A1B0GVG4 234 aa6.45□□□□□ -1.38
SF3B3-214ENST00000572365 H0Y858 1186 aa6.45□□□□□ -1.38
SF3B3-214ENST00000572365 CAPN2P17655 700 aa6.45□□□□□ -1.38
SF3B3-214ENST00000572365 MLLT6P55198 1093 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-214ENST00000572365 ANTXR2P58335 489 aa6.45□□□□□ -1.38
SF3B3-214ENST00000572365 CDK17Q00537 523 aa6.45□□□□□ -1.38
SF3B3-214ENST00000572365 IFIT5Q13325 482 aaKnown RBP6.45□□□□□ -1.38
SF3B3-214ENST00000572365 SMAD4Q13485 552 aaKnown RBP6.45□□□□□ -1.38
SF3B3-214ENST00000572365 RRP1BQ14684 758 aaKnown RBP6.45□□□□□ -1.38
SF3B3-214ENST00000572365 SHROOM1Q2M3G4 852 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-214ENST00000572365 CCSAPQ6IQ19 270 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-214ENST00000572365 LMBR1LQ6UX01 489 aa6.45□□□□□ -1.38
SF3B3-214ENST00000572365 KSR2Q6VAB6 950 aa6.45□□□□□ -1.38
SF3B3-214ENST00000572365 CCAR1Q8IX12 1150 aaKnown RBP6.45□□□□□ -1.38
SF3B3-214ENST00000572365 TSPYL6Q8N831 410 aa6.45□□□□□ -1.38
SF3B3-214ENST00000572365 FNIP1Q8TF40 1166 aa6.45□□□□□ -1.38
SF3B3-214ENST00000572365 ZCCHC14Q8WYQ9 949 aaKnown RBP6.45□□□□□ -1.38
SF3B3-214ENST00000572365 DYDC2Q96IM9 177 aa6.45□□□□□ -1.38
SF3B3-214ENST00000572365 OSBPL6Q9BZF3 934 aa6.45□□□□□ -1.38
SF3B3-214ENST00000572365 ANLNQ9NQW6 1124 aa6.45□□□□□ -1.38
SF3B3-214ENST00000572365 POLR3BQ9NW08 1133 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-214ENST00000572365 Q9UFV3 132 aa6.45□□□□□ -1.38
SF3B3-214ENST00000572365 SERPINB13Q9UIV8 391 aa6.45□□□□□ -1.38
SF3B3-214ENST00000572365 IRAK3Q9Y616 596 aa6.45□□□□□ -1.38
SF3B3-214ENST00000572365 VPS13AQ96RL7 3174 aa6.45□□□□□ -1.38
SF3B3-214ENST00000572365 ATAD5Q96QE3 1844 aa6.45□□□□□ -1.38
SF3B3-214ENST00000572365 DDTLA6NHG4 134 aaPredicted RBP6.44□□□□□ -1.38
SF3B3-214ENST00000572365 ETV2O00321 342 aaPredicted RBP6.44□□□□□ -1.38
SF3B3-214ENST00000572365 PQBP1O60828 265 aaKnown RBP6.44□□□□□ -1.38
SF3B3-214ENST00000572365 KLHL18O94889 574 aa6.44□□□□□ -1.38
SF3B3-214ENST00000572365 POU2F2P09086 479 aa6.44□□□□□ -1.38
SF3B3-214ENST00000572365 MED14OSP0DP75 135 aa6.44□□□□□ -1.38
SF3B3-214ENST00000572365 XPAP23025 273 aaPredicted RBP6.44□□□□□ -1.38
SF3B3-214ENST00000572365 ADCY8P40145 1251 aa6.44□□□□□ -1.38
SF3B3-214ENST00000572365 WASP42768 502 aa6.44□□□□□ -1.38
SF3B3-214ENST00000572365 MESP2Q0VG99 397 aa6.44□□□□□ -1.38
SF3B3-214ENST00000572365 PICALMQ13492 652 aa6.44□□□□□ -1.38
SF3B3-214ENST00000572365 GCKRQ14397 625 aa6.44□□□□□ -1.38
SF3B3-214ENST00000572365 EIF4HQ15056 248 aaKnown RBP6.44□□□□□ -1.38
SF3B3-214ENST00000572365 AKNAD1Q5T1N1 836 aa6.44□□□□□ -1.38
SF3B3-214ENST00000572365 B3GNT9Q6UX72 402 aa6.44□□□□□ -1.38
SF3B3-214ENST00000572365 BTNL9Q6UXG8 535 aa6.44□□□□□ -1.38
SF3B3-214ENST00000572365 FAM129CQ86XR2 697 aa6.44□□□□□ -1.38
SF3B3-214ENST00000572365 GLB1L2Q8IW92 636 aa6.44□□□□□ -1.38
SF3B3-214ENST00000572365 EPB41L4AQ9HCS5 686 aaPredicted RBP6.44□□□□□ -1.38
SF3B3-214ENST00000572365 SPATA6Q9NWH7 488 aaPredicted RBP6.44□□□□□ -1.38
SF3B3-214ENST00000572365 BABAM1Q9NWV8 329 aa6.44□□□□□ -1.38
SF3B3-214ENST00000572365 SAE1Q9UBE0 346 aaPredicted RBP6.44□□□□□ -1.38
SF3B3-214ENST00000572365 DDX20Q9UHI6 824 aaKnown RBP6.44□□□□□ -1.38
SF3B3-214ENST00000572365 PMF1-BGLAPU3KQ54 211 aa6.44□□□□□ -1.38
SF3B3-214ENST00000572365 DOCK1Q14185 1865 aa6.44□□□□□ -1.38
SF3B3-214ENST00000572365 DOCK2Q92608 1830 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms