RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 AQP5P55064 265 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 SNAP25P60880 206 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 SF3B4Q15427 424 aaKnown RBP eCLIP7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 PERM1Q5SV97 790 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 UGT2A3Q6UWM9 527 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 NEK8Q86SG6 692 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 TNS4Q8IZW8 715 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 C12orf50Q8NA57 414 aaPredicted RBP7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 FAM156AQ8NDB6 213 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 ICA1LQ8NDH6 482 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 PCDHB18PQ96TA0 734 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 CCDC77Q9BR77 488 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 TRIM56Q9BRZ2 755 aaKnown RBP7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 COPS7BQ9H9Q2 264 aaPredicted RBP7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 TRPC7Q9HCX4 862 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 OLFML3Q9NRN5 406 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 TFCP2L1Q9NZI6 479 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 POU2F3Q9UKI9 436 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 GMEB1Q9Y692 573 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 PDLIM1O00151 329 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 OCM2P0CE71 109 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 OCMP0CE72 109 aaPredicted RBP7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 IVDP26440 423 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 CRABP2P29373 138 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 RPL5P46777 297 aaKnown RBP7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 PEX3P56589 373 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 DYNLT1P63172 113 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 MYBPC1Q00872 1141 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 MKRN3Q13064 507 aaKnown RBP7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 ITGADQ13349 1161 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 ALX1Q15699 326 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 CNGA3Q16281 694 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 TMEM259Q4ZIN3 620 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 C6orf163Q5TEZ5 329 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 DPY19L2P1Q6NXN4 242 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 ACAD11Q709F0 780 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 KCTD1Q719H9 257 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 SMIM5Q71RC9 77 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 CHST15Q7LFX5 561 aaPredicted RBP7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 DHDDSQ86SQ9 333 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 ADAM32Q8TC27 787 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 HSPH1Q92598 858 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 CASP10Q92851 521 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 NT5C1BQ96P26 610 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 TCHPQ9BT92 498 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 MKNK2Q9HBH9 465 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 LRRC4BQ9NT99 713 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 DDX56Q9NY93 547 aaKnown RBP7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 MROH7Q68CQ1 1323 aa7.62□□□□□ -1.19
LIMCH1-207ENST00000508466 NOP56O00567 594 aaKnown RBP7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 LYPLA1O75608 230 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 PLA2G4BP0C869 781 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 THRAP10827 490 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 RALAP11233 206 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 PORP16435 677 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 SLC16A2P36021 539 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 BTDP43251 543 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 HDAC4P56524 1084 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 DLG4P78352 724 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 CDKL1Q00532 357 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 GNA12Q03113 381 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 EPHA7Q15375 998 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 SIX1Q15475 284 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 GSTA3Q16772 222 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 CES4AQ5XG92 561 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 ELMSAN1Q6PJG2 1045 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 APLFQ8IW19 511 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 DEPDC4Q8N2C3 294 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 DQX1Q8TE96 717 aaKnown RBP7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 SYN2Q92777 582 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 NEO1Q92859 1461 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 USP13Q92995 863 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 SNF8Q96H20 258 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 WRNIP1Q96S55 665 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 OSBPL8Q9BZF1 889 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 C20orf27Q9GZN8 174 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 S100A14Q9HCY8 104 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 GPCPD1Q9NPB8 672 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 MAN1C1Q9NR34 630 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 DDX43Q9NXZ2 648 aaKnown RBP7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 PTTG2Q9NZH5 202 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 PCYOX1Q9UHG3 505 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 HEG1Q9ULI3 1381 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 GPSM3Q9Y4H4 160 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 TIMM22Q9Y584 194 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 PCDHGA3Q9Y5H0 932 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 CACNA1FO60840 1977 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 FUOMA2VDF0 154 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 ZWINTO95229 277 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 S100BP04271 92 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 POLR2MP0CAP2 368 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 ATF7P17544 494 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 NCF2P19878 526 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 CD247P20963 164 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 CTNNA2P26232 953 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 KLRK1P26718 216 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 SOX5P35711 763 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 ARL1P40616 181 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 ACTR3P61158 418 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms