RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 FAM83AQ86UY5 434 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 TEX11Q8IYF3 940 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 UNC5BQ8IZJ1 945 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 FAM43AQ8N2R8 423 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 LSMEM1Q8N8F7 131 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 GLB1L3Q8NCI6 653 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 APPL2Q8NEU8 664 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 SPATA18Q8TC71 538 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 TBC1D20Q96BZ9 403 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 MYEOVQ96EZ4 313 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 FUBP3Q96I24 572 aaKnown RBP eCLIP4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 MPHOSPH8Q99549 860 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 FAM167BQ9BTA0 163 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 NDC1Q9BTX1 674 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 SLC46A2Q9BY10 475 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 WDR11Q9BZH6 1224 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 BRD9Q9H8M2 597 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 COMMD8Q9NX08 183 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 H2AFY2Q9P0M6 372 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 CTNNA3Q9UI47 895 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 SPO11Q9Y5K1 396 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 SYNDIG1LA6NDD5 238 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 KIF1CO43896 1103 aaKnown RBP4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 PQBP1O60828 265 aaKnown RBP4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 SKAP2O75563 359 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 GFPT2O94808 682 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 RHCEP18577 417 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 SDSP20132 328 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 AKAP5P24588 427 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 ABCD1P33897 745 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 PRPHP41219 470 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 STAT1P42224 750 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 COPAP53621 1224 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 USP14P54578 494 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 IL2P60568 153 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 KRT85P78386 507 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 RHDQ02161 417 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 MRPL49Q13405 166 aaKnown RBP4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 CSRP2Q16527 193 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 CCDC38Q502W7 563 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 DNTTIP2Q5QJE6 756 aaKnown RBP4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 DARS2Q6PI48 645 aaKnown RBP4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 SYCE2Q6PIF2 218 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 CCDC149Q6ZUS6 474 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 STRA8Q7Z7C7 330 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 GALNT5Q7Z7M9 940 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 XYLT1Q86Y38 959 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 MYCT1Q8N699 235 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 LILRA3Q8N6C8 439 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 ZNF713Q8N859 430 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 SUPT20HQ8NEM7 779 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 OR8H1Q8NGG4 311 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 RUFY2Q8WXA3 655 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 CCDC43Q96MW1 224 aaKnown RBP4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 TREX2Q9BQ50 279 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 SDF4Q9BRK5 362 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 PDCD2LQ9BRP1 358 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 ADPGKQ9BRR6 497 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 CRB3Q9BUF7 120 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 ABCG4Q9H172 646 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 SERHL2Q9H4I8 314 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 ZMAT4Q9H898 229 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 SMYD2Q9NRG4 433 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 ADARB2Q9NS39 739 aaKnown RBP4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 OXSMQ9NWU1 459 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 MKS1Q9NXB0 559 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 DCAF16Q9NXF7 216 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 RAI14Q9P0K7 980 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 DKK3Q9UBP4 350 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 MAGED2Q9UNF1 606 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 PCDHB6Q9Y5E3 794 aa4.03□□□□□ -1.76
HMGB3P15-201ENST00000507326 GPRASP1Q5JY77 1395 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 MYPNQ86TC9 1320 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 POLR2AP24928 1970 aaKnown RBP4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 FSD2A1L4K1 749 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 RRN3P2A6NIE6 340 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 LEFTY2O00292 366 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 ELL2O00472 640 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 RNASET2O00584 256 aaKnown RBP4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 NDC80O14777 642 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 PSMA7O14818 248 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 MGEA5O60502 916 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 KPNA6O60684 536 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 GAS7O60861 476 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 B3GALNT1O75752 331 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 NCR1O76036 304 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 NDUFA10O95299 355 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 LY86O95711 162 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 ZBED1O96006 694 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 NEFHP12036 1026 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 KRT10P13645 584 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 KRT13P13646 458 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 TNNT1P13805 278 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 ATP2A2P16615 1042 aaKnown RBP4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 ZNF37AP17032 561 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 LPOP22079 712 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 SP100P23497 879 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 HPDP32754 393 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 HSPA4P34932 840 aa4.02□□□□□ -1.77
HMGB3P15-201ENST00000507326 CLK3P49761 638 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms