RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 SLC9A1P19634 815 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 YWHABP31946 246 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 VAMP7P51809 220 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 CDR1P51861 262 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 MFAP3P55082 362 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 JAG1P78504 1218 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 PPFIA1Q13136 1202 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 XKR9Q5GH70 373 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 FAM102BQ5T8I3 360 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 ALS2CLQ60I27 953 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 ZNF746Q6NUN9 644 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 NSMFQ6X4W1 530 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 CCNI2Q6ZMN8 369 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 ATG4DQ86TL0 474 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 CREG2Q8IUH2 290 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 RHOT2Q8IXI1 618 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 C4orf19Q8IY42 314 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 ANKRD13CQ8N6S4 541 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 MCPH1Q8NEM0 835 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 CCDC26Q8TAB7 109 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 SYTL5Q8TDW5 730 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 NSUN6Q8TEA1 469 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 AFAP1L1Q8TED9 768 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 COG1Q8WTW3 980 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 U2AF1L4Q8WU68 220 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 RFFLQ8WZ73 363 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 ZBED3Q96IU2 234 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 CEP89Q96ST8 783 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 RPAP3Q9H6T3 665 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 RC3H2Q9HBD1 1191 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 RAVER2Q9HCJ3 691 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 PDE11AQ9HCR9 933 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 RNF146Q9NTX7 359 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 MBNL3Q9NUK0 354 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 APEX2Q9UBZ4 518 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 PPP1R1BQ9UD71 204 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 ADAMTS6Q9UKP5 1117 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 AMFRQ9UKV5 643 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 TPX2Q9ULW0 747 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 TFR2Q9UP52 801 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 PCDHA10Q9Y5I2 948 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 PPP2R3BQ9Y5P8 575 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 DUSP10Q9Y6W6 482 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 LOXHD1Q8IVV2 1947 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 LTBP3Q9NS15 1303 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 CCDC169A6NNP5 214 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 F8VZ95 297 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 NFIBO00712 420 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 KCNK3O14649 394 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 KIAA0391O15091 583 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 ZNF185O15231 689 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 TGFB1I1O43294 461 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 CEP104O60308 925 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 TLR2O60603 784 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 FTCDO95954 541 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 TMEM253P0C7T8 217 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 ZNF865P0CJ78 1059 aaPredicted RBP6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 ACTN1P12814 892 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 HSPA6P17066 643 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 VCAM1P19320 739 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 KLRC1P26715 233 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 GTF2H1P32780 548 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 CYP2C19P33261 490 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 LMAN1P49257 510 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 AARSP49588 968 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 CASP4P49662 377 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 RARRES1P49788 294 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 MXI1P50539 228 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 DNA2P51530 1060 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 BACE1P56817 501 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 JAM2P57087 298 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 RPS6P62753 249 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 RPL6Q02878 288 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 ENPEPQ07075 957 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 STRN3Q13033 797 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 CUL1Q13616 776 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 PLS1Q14651 629 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 DRAP1Q14919 205 aaPredicted RBP6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 PGM5Q15124 567 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 TSNAXIP1Q2TAA8 658 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 NBPF9Q3BBW0 867 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 SUPT20HL1Q3ZLR7 823 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 ZC2HC1CQ53FD0 456 aaPredicted RBP6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 KIAA1755Q5JYT7 1200 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 SFRP5Q5T4F7 317 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 PRAMEF13Q5VWM6 474 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 PPP1R2P3Q6NXS1 205 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 MIS18BP1Q6P0N0 1132 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 LETMD1Q6P1Q0 360 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 SLC23A3Q6PIS1 610 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 HAUS6Q7Z4H7 955 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 MAATS1Q7Z4T9 603 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 DAAM2Q86T65 1068 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 UBL4BQ8N7F7 174 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 EIF1ADQ8N9N8 165 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 FAM76AQ8TAV0 307 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 MORC4Q8TE76 937 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 TMEM174Q8WUU8 243 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 LRRC45Q96CN5 670 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 BICD1Q96G01 975 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms