RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 APBB1IPQ7Z5R6 666 aaPredicted RBP18.93■□□□□ 0.62
CTSA-204ENST00000372484 OR2W6PQ8NHA6 318 aa18.93■□□□□ 0.62
CTSA-204ENST00000372484 SLCO2A1Q92959 643 aa18.93■□□□□ 0.62
CTSA-204ENST00000372484 OSMRQ99650 979 aa18.93■□□□□ 0.62
CTSA-204ENST00000372484 ELOVL4Q9GZR5 314 aa18.93■□□□□ 0.62
CTSA-204ENST00000372484 CDHR5Q9HBB8 845 aa18.93■□□□□ 0.62
CTSA-204ENST00000372484 SMIM35A0A1B0GVV1 85 aa18.92■□□□□ 0.62
CTSA-204ENST00000372484 MANSC4A6NHS7 340 aaPredicted RBP18.92■□□□□ 0.62
CTSA-204ENST00000372484 F8VP50 259 aa18.92■□□□□ 0.62
CTSA-204ENST00000372484 H0YGN5 161 aa18.92■□□□□ 0.62
CTSA-204ENST00000372484 IRX5P78411 483 aaPredicted RBP18.92■□□□□ 0.62
CTSA-204ENST00000372484 PIGHQ14442 188 aaPredicted RBP18.92■□□□□ 0.62
CTSA-204ENST00000372484 MFSD10Q14728 455 aa18.92■□□□□ 0.62
CTSA-204ENST00000372484 CCL14Q16627 93 aa18.92■□□□□ 0.62
CTSA-204ENST00000372484 SLC27A1Q6PCB7 646 aa18.92■□□□□ 0.62
CTSA-204ENST00000372484 OSBPL8Q9BZF1 889 aa18.92■□□□□ 0.62
CTSA-204ENST00000372484 CYTH4Q9UIA0 394 aa18.92■□□□□ 0.62
CTSA-204ENST00000372484 NFS1Q9Y697 457 aa18.92■□□□□ 0.62
CTSA-204ENST00000372484 TRPM7Q96QT4 1865 aa18.92■□□□□ 0.62
CTSA-204ENST00000372484 MBLAC1A4D2B0 266 aaPredicted RBP18.92■□□□□ 0.62
CTSA-204ENST00000372484 ITGBL1O95965 494 aaPredicted RBP18.92■□□□□ 0.62
CTSA-204ENST00000372484 OGDHQ02218 1023 aa18.92■□□□□ 0.62
CTSA-204ENST00000372484 KRT17Q04695 432 aa18.92■□□□□ 0.62
CTSA-204ENST00000372484 KLF1Q13351 362 aaPredicted RBP18.92■□□□□ 0.62
CTSA-204ENST00000372484 SH2D3CQ8N5H7 860 aa18.92■□□□□ 0.62
CTSA-204ENST00000372484 RNF25Q96BH1 459 aaPredicted RBP18.92■□□□□ 0.62
CTSA-204ENST00000372484 TXLNGYQ9BZA5 131 aa18.92■□□□□ 0.62
CTSA-204ENST00000372484 DCLK3Q9C098 648 aa18.92■□□□□ 0.62
CTSA-204ENST00000372484 SYNCQ9H7C4 482 aa18.92■□□□□ 0.62
CTSA-204ENST00000372484 MTRF1LQ9UGC7 380 aaKnown RBP18.92■□□□□ 0.62
CTSA-204ENST00000372484 TRIP12Q14669 1992 aaPredicted RBP18.91■□□□□ 0.62
CTSA-204ENST00000372484 GOLGA8SH3BPF8 625 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 MYZAPP0CAP1 466 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 TCF4P15884 667 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 CYP2B6P20813 491 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 CETN2P41208 172 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 ATP13A4Q4VNC1 1196 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 DNAJC21Q5F1R6 531 aaKnown RBP18.91■□□□□ 0.62
CTSA-204ENST00000372484 NOTUMQ6P988 496 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 RUFY4Q6ZNE9 571 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 HEXIM2Q96MH2 286 aaKnown RBP18.91■□□□□ 0.62
CTSA-204ENST00000372484 PLEKHA5Q9HAU0 1116 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 NMRK2Q9NPI5 230 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 HOMER3Q9NSC5 361 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 KLHL11Q9NVR0 708 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 SNTG2Q9NY99 539 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 R3HDM2Q9Y2K5 976 aaKnown RBP18.91■□□□□ 0.62
CTSA-204ENST00000372484 KRT3P12035 628 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 CPT1AP50416 773 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 PSMC1P62191 440 aaKnown RBP18.91■□□□□ 0.62
CTSA-204ENST00000372484 ZNF844Q08AG5 666 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 MYO1EQ12965 1108 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 NFX1Q12986 1120 aaKnown RBP18.91■□□□□ 0.62
CTSA-204ENST00000372484 SPDYCQ5MJ68 293 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 RCOR2Q8IZ40 523 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 GRK7Q8WTQ7 553 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 RBM41Q96IZ5 413 aaKnown RBP18.91■□□□□ 0.62
CTSA-204ENST00000372484 ATP6V1G3Q96LB4 118 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 CPXM1Q96SM3 734 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 EIF2AQ9BY44 585 aaKnown RBP18.91■□□□□ 0.62
CTSA-204ENST00000372484 CENPHQ9H3R5 247 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 TJP2Q9UDY2 1190 aa18.91■□□□□ 0.62
CTSA-204ENST00000372484 FEZ2Q9UHY8 353 aaPredicted RBP18.91■□□□□ 0.62
CTSA-204ENST00000372484 BARX2Q9UMQ3 279 aaPredicted RBP18.91■□□□□ 0.62
CTSA-204ENST00000372484 MICAL2O94851 1124 aa18.9■□□□□ 0.62
CTSA-204ENST00000372484 STAU1O95793 577 aaKnown RBP18.9■□□□□ 0.62
CTSA-204ENST00000372484 DARSP14868 501 aaKnown RBP18.9■□□□□ 0.62
CTSA-204ENST00000372484 INCA1Q0VD86 236 aa18.9■□□□□ 0.62
CTSA-204ENST00000372484 CALCOCO2Q13137 446 aa18.9■□□□□ 0.62
CTSA-204ENST00000372484 ODF2Q5BJF6 829 aa18.9■□□□□ 0.62
CTSA-204ENST00000372484 LRRC38Q5VT99 294 aa18.9■□□□□ 0.62
CTSA-204ENST00000372484 LEKR1Q6ZMV7 388 aa18.9■□□□□ 0.62
CTSA-204ENST00000372484 DPH6Q7L8W6 267 aa18.9■□□□□ 0.62
CTSA-204ENST00000372484 NIPA2Q8N8Q9 360 aa18.9■□□□□ 0.62
CTSA-204ENST00000372484 DNAJB3Q8WWF6 145 aa18.9■□□□□ 0.62
CTSA-204ENST00000372484 CCDC114Q96M63 670 aa18.9■□□□□ 0.62
CTSA-204ENST00000372484 CXCL16Q9H2A7 254 aa18.9■□□□□ 0.62
CTSA-204ENST00000372484 TMBIM4Q9HC24 238 aa18.9■□□□□ 0.62
CTSA-204ENST00000372484 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.9■□□□□ 0.62
CTSA-204ENST00000372484 RALGAPA2Q2PPJ7 1873 aa18.9■□□□□ 0.62
CTSA-204ENST00000372484 SCN1AP35498 2009 aa18.9■□□□□ 0.62
CTSA-204ENST00000372484 SIGLEC16A6NMB1 481 aa18.89■□□□□ 0.62
CTSA-204ENST00000372484 PI4K2BG5E9Z4 385 aa18.89■□□□□ 0.62
CTSA-204ENST00000372484 M0QYV0 167 aa18.89■□□□□ 0.62
CTSA-204ENST00000372484 GAS8O95995 478 aa18.89■□□□□ 0.62
CTSA-204ENST00000372484 KRT1P04264 644 aa18.89■□□□□ 0.62
CTSA-204ENST00000372484 MYL3P08590 195 aa18.89■□□□□ 0.62
CTSA-204ENST00000372484 VDRP11473 427 aa18.89■□□□□ 0.62
CTSA-204ENST00000372484 RFC1P35251 1148 aaPredicted RBP18.89■□□□□ 0.62
CTSA-204ENST00000372484 ACTN2P35609 894 aa18.89■□□□□ 0.62
CTSA-204ENST00000372484 PSEN2P49810 448 aa18.89■□□□□ 0.62
CTSA-204ENST00000372484 NDST1P52848 882 aa18.89■□□□□ 0.62
CTSA-204ENST00000372484 PMS2P54278 862 aa18.89■□□□□ 0.62
CTSA-204ENST00000372484 YARSP54577 528 aaKnown RBP18.89■□□□□ 0.62
CTSA-204ENST00000372484 HIC1Q14526 733 aa18.89■□□□□ 0.62
CTSA-204ENST00000372484 PCBP1Q15365 356 aaKnown RBP eCLIP18.89■□□□□ 0.621e-6■■□□□ 13.4
CTSA-204ENST00000372484 C17orf99Q6UX52 265 aa18.89■□□□□ 0.62
CTSA-204ENST00000372484 ANKS1BQ7Z6G8 1248 aa18.89■□□□□ 0.62
CTSA-204ENST00000372484 ATL2Q8NHH9 583 aa18.89■□□□□ 0.62
CTSA-204ENST00000372484 USP6NLQ92738 828 aa18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms