RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 DRAP1Q14919 205 aaPredicted RBP9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 XKR9Q5GH70 373 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 ACAD11Q709F0 780 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 FBXO11Q86XK2 927 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 SLF2Q8IX21 1173 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 LINC00116Q8NCU8 138 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 TMIGD2Q96BF3 282 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 GRAMD1AQ96CP6 724 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 CSRNP1Q96S65 589 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 TTC1Q99614 292 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 C20orf27Q9GZN8 174 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 SAR1AQ9NR31 198 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 ZDHHC7Q9NXF8 308 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 TRPC5Q9UL62 973 aaPredicted RBP9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 TTLL3Q9Y4R7 772 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 KANSL1LA0AUZ9 987 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 THAP12O43422 761 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 CAMTA2O94983 1202 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 SAT1P21673 171 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 FXR2P51116 673 aaKnown RBP eCLIP9.2□□□□□ -0.941e-7■■■□□ 14.9
SMARCA1-203ENST00000371123 PEX3P56589 373 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 PSMD6Q15008 389 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 ACAP1Q15027 740 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 SPDYAQ5MJ70 313 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 IL31Q6EBC2 164 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 CEP128Q6ZU80 1094 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 TMPRSS6Q8IU80 811 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 EFCAB3Q8N7B9 438 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 GSTCDQ8NEC7 633 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 PPP1R14CQ8TAE6 165 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 LMO3Q8TAP4 145 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 SPATA7Q9P0W8 599 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 A0A088AWK7 358 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 LAD1O00515 517 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 LMNAP02545 664 aaKnown RBP9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 PDGFRBP09619 1106 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 RASSF2P50749 326 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 MYBPC1Q00872 1141 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 CCNIQ14094 377 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 GRM4Q14833 912 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 DLGAP5Q15398 846 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 ARHGEF18Q6ZSZ5 1173 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 SLC5A5Q92911 643 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 MKL1Q969V6 931 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 GJD4Q96KN9 370 aaPredicted RBP9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 ANO3Q9BYT9 981 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 VCX3BQ9H321 246 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 LRRC19Q9H756 370 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 VCX3AQ9NNX9 186 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 CIDEBQ9UHD4 219 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 STK24Q9Y6E0 443 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 TTLL13PA6NNM8 815 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 H3BNX3 289 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 H3BSA7 217 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 SETSIPP0DME0 302 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 PAX3P23760 479 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 ARL4CP56559 192 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 GRM1Q13255 1194 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 SETDB1Q15047 1291 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 CFAP157Q5JU67 520 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 Q6ZNX1 250 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 ZNF34Q8IZ26 560 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 SYCE1Q8N0S2 351 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 CFAP61Q8NHU2 1237 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 PPP4R1Q8TF05 950 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 KAT5Q92993 513 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 PPP1R10Q96QC0 940 aaKnown RBP9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 EPB41L1Q9H4G0 881 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 C10orf88Q9H8K7 445 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 GPRC5CQ9NQ84 441 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 ZNF148Q9UQR1 794 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 KNL1Q8NG31 2342 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 FAM237BA0A1B0GVD1 139 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 TMEM247A6NEH6 219 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 MEI4A8MW99 385 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 PODXLO00592 558 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 TGFB1I1O43294 461 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 TPD52L2O43399 206 aaKnown RBP9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 CCDC22O60826 627 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 DCTN3O75935 186 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 HNRNPCP07910 306 aaKnown RBP eCLIP9.19□□□□□ -0.942e-7■■■■□ 19.3
SMARCA1-203ENST00000371123 ETS1P14921 441 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 VCLP18206 1134 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 ACTR3P61158 418 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 R3HDM1Q15032 1099 aaKnown RBP9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 MFSD4BQ5TF39 518 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 LRRC8BQ6P9F7 803 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 LVRNQ6Q4G3 990 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 RNF207Q6ZRF8 634 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 SCYL3Q8IZE3 742 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 PAF1Q8N7H5 531 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 LRRN4Q8WUT4 740 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 ZNF512Q96ME7 567 aaPredicted RBP9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 RUSC1Q9BVN2 902 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 STK33Q9BYT3 514 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 PTTG2Q9NZH5 202 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 INPP5FQ9Y2H2 1132 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 SH3GLB1Q9Y371 365 aa9.19□□□□□ -0.94
SMARCA1-203ENST00000371123 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms