RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ST13P5Q8NFI4 369 aaPredicted RBP29.64■■■□□ 2.34
ATPAF1-201ENST00000329231 PARD3BQ8TEW8 1205 aa29.64■■■□□ 2.34
ATPAF1-201ENST00000329231 ZNF516Q92618 1163 aa29.64■■■□□ 2.34
ATPAF1-201ENST00000329231 RMND1Q9NWS8 449 aa29.64■■■□□ 2.34
ATPAF1-201ENST00000329231 ABI2Q9NYB9 513 aaPredicted RBP29.64■■■□□ 2.34
ATPAF1-201ENST00000329231 HOOK1Q9UJC3 728 aaKnown RBP29.64■■■□□ 2.34
ATPAF1-201ENST00000329231 MAPK8IP1Q9UQF2 711 aa29.64■■■□□ 2.34
ATPAF1-201ENST00000329231 PCDHB5Q9Y5E4 795 aa29.64■■■□□ 2.34
ATPAF1-201ENST00000329231 GABRDO14764 452 aa29.63■■■□□ 2.33
ATPAF1-201ENST00000329231 PHACTR2O75167 634 aa29.63■■■□□ 2.33
ATPAF1-201ENST00000329231 CST3P01034 146 aaPredicted RBP29.63■■■□□ 2.33
ATPAF1-201ENST00000329231 CCR2P41597 374 aa29.63■■■□□ 2.33
ATPAF1-201ENST00000329231 CASP4P49662 377 aa29.63■■■□□ 2.33
ATPAF1-201ENST00000329231 LIMS2Q7Z4I7 341 aa29.63■■■□□ 2.33
ATPAF1-201ENST00000329231 TIGD1Q96MW7 591 aa29.63■■■□□ 2.33
ATPAF1-201ENST00000329231 MFSD1Q9H3U5 465 aa29.63■■■□□ 2.33
ATPAF1-201ENST00000329231 WNT16Q9UBV4 365 aa29.63■■■□□ 2.33
ATPAF1-201ENST00000329231 SOAT2O75908 522 aa29.62■■■□□ 2.33
ATPAF1-201ENST00000329231 PDGFBP01127 241 aaPredicted RBP29.62■■■□□ 2.33
ATPAF1-201ENST00000329231 CLDN10P78369 228 aa29.62■■■□□ 2.33
ATPAF1-201ENST00000329231 VEPH1Q14D04 833 aa29.62■■■□□ 2.33
ATPAF1-201ENST00000329231 NFIL3Q16649 462 aa29.62■■■□□ 2.33
ATPAF1-201ENST00000329231 INTS6LQ5JSJ4 861 aaKnown RBP29.62■■■□□ 2.33
ATPAF1-201ENST00000329231 CEP135Q66GS9 1140 aa29.62■■■□□ 2.33
ATPAF1-201ENST00000329231 DNAJB7Q7Z6W7 309 aaPredicted RBP29.62■■■□□ 2.33
ATPAF1-201ENST00000329231 OSTM1Q86WC4 334 aa29.62■■■□□ 2.33
ATPAF1-201ENST00000329231 FAM200AQ8TCP9 573 aa29.62■■■□□ 2.33
ATPAF1-201ENST00000329231 PLEKHO2Q8TD55 490 aa29.62■■■□□ 2.33
ATPAF1-201ENST00000329231 PSMG2Q969U7 264 aa29.62■■■□□ 2.33
ATPAF1-201ENST00000329231 MMS19Q96T76 1030 aa29.62■■■□□ 2.33
ATPAF1-201ENST00000329231 RPP25Q9BUL9 199 aaKnown RBP29.62■■■□□ 2.33
ATPAF1-201ENST00000329231 KCNH6Q9H252 994 aa29.62■■■□□ 2.33
ATPAF1-201ENST00000329231 LRRIQ3A6PVS8 624 aaPredicted RBP29.61■■■□□ 2.33
ATPAF1-201ENST00000329231 SMC2O95347 1197 aa29.61■■■□□ 2.33
ATPAF1-201ENST00000329231 HAPLN1P10915 354 aaPredicted RBP29.61■■■□□ 2.33
ATPAF1-201ENST00000329231 ACAT1P24752 427 aaKnown RBP29.61■■■□□ 2.33
ATPAF1-201ENST00000329231 ATICP31939 592 aa29.61■■■□□ 2.33
ATPAF1-201ENST00000329231 CDR1P51861 262 aa29.61■■■□□ 2.33
ATPAF1-201ENST00000329231 BIRC3Q13489 604 aa29.61■■■□□ 2.33
ATPAF1-201ENST00000329231 GSDMAQ96QA5 445 aa29.61■■■□□ 2.33
ATPAF1-201ENST00000329231 LRRC3Q9BY71 257 aa29.61■■■□□ 2.33
ATPAF1-201ENST00000329231 SLC2A4RGQ9NR83 387 aa29.61■■■□□ 2.33
ATPAF1-201ENST00000329231 TMLHEQ9NVH6 421 aa29.61■■■□□ 2.33
ATPAF1-201ENST00000329231 MAPK13O15264 365 aa29.6■■■□□ 2.33
ATPAF1-201ENST00000329231 FGF19O95750 216 aa29.6■■■□□ 2.33
ATPAF1-201ENST00000329231 STAU1O95793 577 aaKnown RBP29.6■■■□□ 2.33
ATPAF1-201ENST00000329231 CFHP08603 1231 aa29.6■■■□□ 2.33
ATPAF1-201ENST00000329231 NR2F2P24468 414 aa29.6■■■□□ 2.33
ATPAF1-201ENST00000329231 RPL13P26373 211 aaKnown RBP29.6■■■□□ 2.33
ATPAF1-201ENST00000329231 TMC8Q8IU68 726 aa29.6■■■□□ 2.33
ATPAF1-201ENST00000329231 TMC2Q8TDI7 906 aa29.6■■■□□ 2.33
ATPAF1-201ENST00000329231 SYAP1Q96A49 352 aaPredicted RBP29.6■■■□□ 2.33
ATPAF1-201ENST00000329231 KXD1Q9BQD3 176 aa29.6■■■□□ 2.33
ATPAF1-201ENST00000329231 ABCB6Q9NP58 842 aa29.6■■■□□ 2.33
ATPAF1-201ENST00000329231 MOSPD3O75425 235 aa29.59■■■□□ 2.33
ATPAF1-201ENST00000329231 ECI2O75521 394 aa29.59■■■□□ 2.33
ATPAF1-201ENST00000329231 FAM163BP0C2L3 166 aa29.59■■■□□ 2.33
ATPAF1-201ENST00000329231 WARSP23381 471 aaKnown RBP29.59■■■□□ 2.33
ATPAF1-201ENST00000329231 MYL6P60660 151 aa29.59■■■□□ 2.33
ATPAF1-201ENST00000329231 TNNC1P63316 161 aa29.59■■■□□ 2.33
ATPAF1-201ENST00000329231 TAF12Q16514 161 aa29.59■■■□□ 2.33
ATPAF1-201ENST00000329231 WDR72Q3MJ13 1102 aa29.59■■■□□ 2.33
ATPAF1-201ENST00000329231 SIX5Q8N196 739 aa29.59■■■□□ 2.33
ATPAF1-201ENST00000329231 KBTBD7Q8WVZ9 684 aa29.59■■■□□ 2.33
ATPAF1-201ENST00000329231 LPIN3Q9BQK8 851 aa29.59■■■□□ 2.33
ATPAF1-201ENST00000329231 GPR88Q9GZN0 384 aa29.59■■■□□ 2.33
ATPAF1-201ENST00000329231 GTF3C4Q9UKN8 822 aa29.59■■■□□ 2.33
ATPAF1-201ENST00000329231 ATF6P18850 670 aa29.58■■■□□ 2.33
ATPAF1-201ENST00000329231 AVPR2P30518 371 aa29.58■■■□□ 2.33
ATPAF1-201ENST00000329231 TDRD10Q5VZ19 366 aaKnown RBP29.58■■■□□ 2.33
ATPAF1-201ENST00000329231 POTEHQ6S545 545 aa29.58■■■□□ 2.33
ATPAF1-201ENST00000329231 SHKBP1Q8TBC3 707 aa29.58■■■□□ 2.33
ATPAF1-201ENST00000329231 SMARCE1Q969G3 411 aa29.58■■■□□ 2.33
ATPAF1-201ENST00000329231 PKMYT1Q99640 499 aa29.58■■■□□ 2.33
ATPAF1-201ENST00000329231 PI4K2AQ9BTU6 479 aa29.58■■■□□ 2.33
ATPAF1-201ENST00000329231 GTPBP4Q9BZE4 634 aaKnown RBP29.58■■■□□ 2.33
ATPAF1-201ENST00000329231 CDH9Q9ULB4 789 aa29.58■■■□□ 2.33
ATPAF1-201ENST00000329231 A0A1W2PRU2 124 aa29.57■■■□□ 2.32
ATPAF1-201ENST00000329231 IKBKBO14920 756 aa29.57■■■□□ 2.32
ATPAF1-201ENST00000329231 TACC1O75410 805 aa29.57■■■□□ 2.32
ATPAF1-201ENST00000329231 C4BPAP04003 597 aaKnown RBP29.57■■■□□ 2.32
ATPAF1-201ENST00000329231 GJA1P17302 382 aa29.57■■■□□ 2.32
ATPAF1-201ENST00000329231 TEAD2Q15562 447 aa29.57■■■□□ 2.32
ATPAF1-201ENST00000329231 FAM78AQ5JUQ0 283 aa29.57■■■□□ 2.32
ATPAF1-201ENST00000329231 ELOA2Q8IYF1 753 aaPredicted RBP29.57■■■□□ 2.32
ATPAF1-201ENST00000329231 SMYD4Q8IYR2 804 aaPredicted RBP29.57■■■□□ 2.32
ATPAF1-201ENST00000329231 GPR152Q8TDT2 470 aa29.57■■■□□ 2.32
ATPAF1-201ENST00000329231 ELSPBP1Q96BH3 223 aa29.57■■■□□ 2.32
ATPAF1-201ENST00000329231 ASB16Q96NS5 453 aa29.57■■■□□ 2.32
ATPAF1-201ENST00000329231 SYT15Q9BQS2 421 aa29.57■■■□□ 2.32
ATPAF1-201ENST00000329231 XYLT2Q9H1B5 865 aa29.57■■■□□ 2.32
ATPAF1-201ENST00000329231 SNX25Q9H3E2 840 aa29.57■■■□□ 2.32
ATPAF1-201ENST00000329231 SLITRK6Q9H5Y7 841 aa29.57■■■□□ 2.32
ATPAF1-201ENST00000329231 ZFP14Q9HCL3 533 aa29.57■■■□□ 2.32
ATPAF1-201ENST00000329231 PCDHA5Q9Y5H7 936 aa29.57■■■□□ 2.32
ATPAF1-201ENST00000329231 ZDBF2Q9HCK1 2354 aa29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 NRG2O14511 850 aaPredicted RBP29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 KINO60870 393 aaKnown RBP29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 LMO2P25791 158 aa29.56■■■□□ 2.32
ATPAF1-201ENST00000329231 VCPP55072 806 aaKnown RBP29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms