RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 P4HA1P13674 534 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 MLH1P40692 756 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 RAP1GAPP47736 663 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 CDH8P55286 799 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 BPIFB4P59827 614 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 BFSP2Q13515 415 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 C10orf62Q5T681 223 aaPredicted RBP11.41□□□□□ -0.58
CASP3-201ENST00000308394 LRRC8DQ7L1W4 858 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 PALB2Q86YC2 1186 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 SYT11Q9BT88 431 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 SLC7A5P2Q9GIP4 190 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 NOCTQ9UK39 431 aaKnown RBP11.41□□□□□ -0.58
CASP3-201ENST00000308394 CITO14578 2027 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 KCNE1P15382 129 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 SELPP16109 830 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 GNA15P30679 374 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 TNNC1P63316 161 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 MBTPS1Q14703 1052 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 KIAA1958Q8N8K9 716 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 DHRS1Q96LJ7 313 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 GAD1Q99259 594 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 GOLGA2P5Q9HBQ8 144 aa11.41□□□□□ -0.58
CASP3-201ENST00000308394 PPEF2O14830 753 aa11.4□□□□□ -0.58
CASP3-201ENST00000308394 KRT38O76015 456 aa11.4□□□□□ -0.58
CASP3-201ENST00000308394 CD4P01730 458 aa11.4□□□□□ -0.58
CASP3-201ENST00000308394 H2AFZP0C0S5 128 aa11.4□□□□□ -0.58
CASP3-201ENST00000308394 IMPDH2P12268 514 aa11.4□□□□□ -0.58
CASP3-201ENST00000308394 CHRNB2P17787 502 aa11.4□□□□□ -0.58
CASP3-201ENST00000308394 SESN3P58005 492 aa11.4□□□□□ -0.58
CASP3-201ENST00000308394 YWHAEP62258 255 aaKnown RBP11.4□□□□□ -0.58
CASP3-201ENST00000308394 CDR2Q01850 454 aa11.4□□□□□ -0.58
CASP3-201ENST00000308394 XKR4Q5GH76 650 aa11.4□□□□□ -0.58
CASP3-201ENST00000308394 NAIF1Q69YI7 327 aaPredicted RBP11.4□□□□□ -0.58
CASP3-201ENST00000308394 TRAF7Q6Q0C0 670 aa11.4□□□□□ -0.58
CASP3-201ENST00000308394 SLC39A5Q6ZMH5 540 aa11.4□□□□□ -0.58
CASP3-201ENST00000308394 H2AFVQ71UI9 128 aa11.4□□□□□ -0.58
CASP3-201ENST00000308394 SLC35F6Q8N357 371 aa11.4□□□□□ -0.58
CASP3-201ENST00000308394 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.4□□□□□ -0.58
CASP3-201ENST00000308394 DDX27Q96GQ7 796 aaKnown RBP11.4□□□□□ -0.58
CASP3-201ENST00000308394 SMYD3Q9H7B4 428 aa11.4□□□□□ -0.58
CASP3-201ENST00000308394 COMMD8Q9NX08 183 aa11.4□□□□□ -0.58
CASP3-201ENST00000308394 TAS2R14Q9NYV8 317 aa11.4□□□□□ -0.58
CASP3-201ENST00000308394 CWC15Q9P013 229 aaKnown RBP11.4□□□□□ -0.58
CASP3-201ENST00000308394 A0A0U1RQF3 1178 aa11.4□□□□□ -0.59
CASP3-201ENST00000308394 PJA2O43164 708 aa11.4□□□□□ -0.59
CASP3-201ENST00000308394 BUB1O43683 1085 aa11.4□□□□□ -0.59
CASP3-201ENST00000308394 ABCB4P21439 1286 aa11.4□□□□□ -0.59
CASP3-201ENST00000308394 SSTR3P32745 418 aaPredicted RBP11.4□□□□□ -0.59
CASP3-201ENST00000308394 RAB27AP51159 221 aa11.4□□□□□ -0.59
CASP3-201ENST00000308394 FMO1Q01740 532 aa11.4□□□□□ -0.59
CASP3-201ENST00000308394 DSC3Q14574 896 aa11.4□□□□□ -0.59
CASP3-201ENST00000308394 PKN2Q16513 984 aaKnown RBP11.4□□□□□ -0.59
CASP3-201ENST00000308394 AGAP9Q5VTM2 703 aa11.4□□□□□ -0.59
CASP3-201ENST00000308394 C9orf57Q5W0N0 161 aa11.4□□□□□ -0.59
CASP3-201ENST00000308394 LCA5Q86VQ0 697 aa11.4□□□□□ -0.59
CASP3-201ENST00000308394 OLIG1Q8TAK6 271 aa11.4□□□□□ -0.59
CASP3-201ENST00000308394 CENPTQ96BT3 561 aa11.4□□□□□ -0.59
CASP3-201ENST00000308394 PCDHB18PQ96TA0 734 aa11.4□□□□□ -0.59
CASP3-201ENST00000308394 CENPOQ9BU64 300 aa11.4□□□□□ -0.59
CASP3-201ENST00000308394 CRISPLD2Q9H0B8 497 aa11.4□□□□□ -0.59
CASP3-201ENST00000308394 VRTNQ9H8Y1 702 aa11.4□□□□□ -0.59
CASP3-201ENST00000308394 SNX9Q9Y5X1 595 aa11.4□□□□□ -0.59
CASP3-201ENST00000308394 ARL5CA6NH57 179 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 PTGESO14684 152 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 THAP12O43422 761 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 MOCS3O95396 460 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 HSPA1AP0DMV8 641 aaKnown RBP11.39□□□□□ -0.59
CASP3-201ENST00000308394 HSPA1BP0DMV9 641 aaKnown RBP11.39□□□□□ -0.59
CASP3-201ENST00000308394 ATF7P17544 494 aaPredicted RBP11.39□□□□□ -0.59
CASP3-201ENST00000308394 CA8P35219 290 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 AFF1P51825 1210 aaKnown RBP11.39□□□□□ -0.59
CASP3-201ENST00000308394 GALCP54803 685 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 SOX4Q06945 474 aaPredicted RBP11.39□□□□□ -0.59
CASP3-201ENST00000308394 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.39□□□□□ -0.59
CASP3-201ENST00000308394 AGMOQ6ZNB7 445 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 RELL1Q8IUW5 271 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 CCDC26Q8TAB7 109 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 DDX1Q92499 740 aaKnown RBP11.39□□□□□ -0.59
CASP3-201ENST00000308394 BHMTQ93088 406 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 BCO2Q9BYV7 579 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 MYO1AQ9UBC5 1043 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 CNTN6Q9UQ52 1028 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 GIT1Q9Y2X7 761 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 V9GYY5 206 aaPredicted RBP11.39□□□□□ -0.59
CASP3-201ENST00000308394 PABPN1LA6NDY0 278 aaKnown RBP11.39□□□□□ -0.59
CASP3-201ENST00000308394 DCDC2CA8MYV0 355 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 ZNF623O75123 536 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 FTLP02792 175 aaPredicted RBP11.39□□□□□ -0.59
CASP3-201ENST00000308394 THP07101 528 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 ZNF16P17020 682 aaPredicted RBP11.39□□□□□ -0.59
CASP3-201ENST00000308394 ZNF24P17028 368 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 CTCFP49711 727 aaPredicted RBP11.39□□□□□ -0.59
CASP3-201ENST00000308394 ALKBH2Q6NS38 261 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 UBR7Q8N806 425 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 GABPB2Q8TAK5 448 aaPredicted RBP11.39□□□□□ -0.59
CASP3-201ENST00000308394 DIS3LQ8TF46 1054 aaKnown RBP11.39□□□□□ -0.59
CASP3-201ENST00000308394 PGBD4Q96DM1 585 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 SDCBP2Q9H190 292 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 RSAD1Q9HA92 442 aa11.39□□□□□ -0.59
CASP3-201ENST00000308394 SALL4Q9UJQ4 1053 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms