RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC8	YPR055W	SPT3	P06844	337 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	VMA6	P32366	345 aa	Known RBP	0.18	□□□□□ -2.38
SEC8	YPR055W	TCA17	P32613	152 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	SNC2	P33328	115 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	ERG28	P40030	148 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	YER085C	P40058	173 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	MET31	Q03081	177 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	MAK3	Q03503	176 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	BNA7	Q04066	261 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	VAM10	Q08474	114 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	YKL183C-A	Q3E765	70 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	LSO2	Q3E772	92 aa	Known RBP	0.18	□□□□□ -2.38
SEC8	YPR055W	CDC36	P06100	191 aa	Predicted RBP	0.18	□□□□□ -2.38
SEC8	YPR055W	SRL3	P36167	246 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	SOK1	P40317	901 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	MPC3	P53311	146 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	DIG2	Q03373	323 aa	Known RBP	0.18	□□□□□ -2.38
SEC8	YPR055W	GPM2	Q12008	311 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	FSF1	Q12029	327 aa	Known RBP	0.18	□□□□□ -2.38
SEC8	YPR055W	ATG40	Q99325	256 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	RPL27A	P0C2H6	136 aa	Known RBP	0.17	□□□□□ -2.38
SEC8	YPR055W	KSS1	P14681	368 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	BET1	P22804	142 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	TFC1	P32367	649 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	SIP3	P38717	1229 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	RSM25	P40496	264 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	FAR7	P43592	221 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	BRR6	P53062	197 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	YGR050C	P53231	118 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	CUS2	P53830	285 aa	Predicted RBP	0.17	□□□□□ -2.38
SEC8	YPR055W	YLR283W	Q05867	314 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	YDL180W	Q12301	547 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	GIS3	Q12418	502 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	NHP6B	P11633	99 aa	Known RBP	0.17	□□□□□ -2.38
SEC8	YPR055W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.17	□□□□□ -2.38	not detected
SEC8	YPR055W	GCN3	P14741	305 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	SEC11	P15367	167 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	PBN1	P25580	416 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	YBR209W	P38311	105 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	YBR285W	P38354	144 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	YHL037C	P38733	133 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	YEL008W	P40001	126 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	MIC26	P50087	233 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	YDR249C	Q03787	373 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	GGA1	Q06336	557 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	JLP1	Q12358	412 aa		0.17	□□□□□ -2.38
SEC8	YPR055W	YBR121C-A	P0C5L4	52 aa		0.16	□□□□□ -2.38
SEC8	YPR055W	MER1	P16523	270 aa		0.16	□□□□□ -2.38
SEC8	YPR055W	SSO1	P32867	290 aa		0.16	□□□□□ -2.38
SEC8	YPR055W	AIM25	P47140	327 aa		0.16	□□□□□ -2.38
SEC8	YPR055W	CWC23	P52868	283 aa	Predicted RBP	0.16	□□□□□ -2.38
SEC8	YPR055W	FUS2	Q05670	677 aa		0.16	□□□□□ -2.38
SEC8	YPR055W	YOR072W	Q08486	104 aa		0.16	□□□□□ -2.38
SEC8	YPR055W	RPB3	P16370	318 aa	Known RBP	0.16	□□□□□ -2.38
SEC8	YPR055W	SPO13	P23624	291 aa		0.16	□□□□□ -2.38
SEC8	YPR055W	RPL24B	P24000	155 aa	Known RBP	0.16	□□□□□ -2.38
SEC8	YPR055W	PRP18	P33411	251 aa	Predicted RBP	0.16	□□□□□ -2.38
SEC8	YPR055W	BMH2	P34730	273 aa	Known RBP	0.16	□□□□□ -2.38
SEC8	YPR055W	DID2	P69771	204 aa		0.16	□□□□□ -2.38
SEC8	YPR055W	IKI3	Q06706	1349 aa	Known RBP	0.16	□□□□□ -2.38
SEC8	YPR055W	POR1	P04840	283 aa	Known RBP	0.16	□□□□□ -2.38
SEC8	YPR055W	CDC33	P07260	213 aa	Known RBP	0.16	□□□□□ -2.38
SEC8	YPR055W	YER188C-A	P0C0V2	99 aa		0.16	□□□□□ -2.38
SEC8	YPR055W	URA5	P13298	226 aa	Known RBP	0.16	□□□□□ -2.38
SEC8	YPR055W	PTC1	P35182	281 aa		0.16	□□□□□ -2.38
SEC8	YPR055W	MGA1	P53050	456 aa		0.16	□□□□□ -2.38
SEC8	YPR055W	YML108W	Q03759	105 aa		0.16	□□□□□ -2.38
SEC8	YPR055W	CUE4	Q04201	117 aa	Predicted RBP	0.16	□□□□□ -2.38
SEC8	YPR055W	FIT2	Q08906	153 aa		0.16	□□□□□ -2.38
SEC8	YPR055W	YPR014C	Q6B0W2	109 aa		0.16	□□□□□ -2.38
SEC8	YPR055W	SEC4	P07560	215 aa	Known RBP	0.15	□□□□□ -2.39
SEC8	YPR055W	SEC14	P24280	304 aa	Known RBP	0.15	□□□□□ -2.39
SEC8	YPR055W	PDR17	P53844	350 aa		0.15	□□□□□ -2.39
SEC8	YPR055W	YMR099C	Q03161	297 aa	Known RBP	0.15	□□□□□ -2.39
SEC8	YPR055W	RCE1	Q03530	315 aa		0.15	□□□□□ -2.39
SEC8	YPR055W	YHR007C-A	Q07074	71 aa		0.15	□□□□□ -2.39
SEC8	YPR055W	RPL25	P04456	142 aa	Known RBP	0.15	□□□□□ -2.39
SEC8	YPR055W	SRP14	P38985	146 aa		0.15	□□□□□ -2.39
SEC8	YPR055W	DGA1	Q08650	418 aa		0.15	□□□□□ -2.39
SEC8	YPR055W	PEX11	Q12462	236 aa		0.15	□□□□□ -2.39
SEC8	YPR055W	STE18	P18852	110 aa		0.14	□□□□□ -2.39
SEC8	YPR055W	CKS1	P20486	150 aa	Known RBP	0.14	□□□□□ -2.39
SEC8	YPR055W	TAF14	P35189	244 aa		0.14	□□□□□ -2.39
SEC8	YPR055W	YHL018W	P38744	120 aa	Predicted RBP	0.14	□□□□□ -2.39
SEC8	YPR055W	HYR1	P40581	163 aa	Known RBP	0.14	□□□□□ -2.39
SEC8	YPR055W	YFL065C	P43539	102 aa		0.14	□□□□□ -2.39
SEC8	YPR055W	LSM7	P53905	115 aa	Known RBP	0.14	□□□□□ -2.39
SEC8	YPR055W	YHP1	Q04116	353 aa		0.14	□□□□□ -2.39
SEC8	YPR055W	YDR391C	Q04170	232 aa		0.14	□□□□□ -2.39
SEC8	YPR055W	YMR252C	Q04814	134 aa		0.14	□□□□□ -2.39
SEC8	YPR055W	YMR226C	Q05016	267 aa	Known RBP	0.14	□□□□□ -2.39
SEC8	YPR055W	YPR174C	Q06616	221 aa	Predicted RBP	0.14	□□□□□ -2.39
SEC8	YPR055W	YOL014W	Q08110	124 aa		0.14	□□□□□ -2.39
SEC8	YPR055W	IRC23	Q08416	157 aa		0.14	□□□□□ -2.39
SEC8	YPR055W	UIP4	Q08926	304 aa		0.14	□□□□□ -2.39
SEC8	YPR055W	YPR013C	Q12145	317 aa		0.14	□□□□□ -2.39
SEC8	YPR055W	NUM1	Q00402	2748 aa		0.14	□□□□□ -2.39
SEC8	YPR055W	KDX1	P36005	433 aa		0.14	□□□□□ -2.39
SEC8	YPR055W	YKT6	P36015	200 aa	Known RBP	0.14	□□□□□ -2.39
SEC8	YPR055W	FLX1	P40464	311 aa		0.14	□□□□□ -2.39

Retrieved 100 of 5,963 RNA–protein pairs in 65.8 ms