RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C YLR236CA0A023PZG4 107 aa1.74□□□□□ -2.13
CCL1YPR025C GPA2P10823 449 aa1.74□□□□□ -2.13
CCL1YPR025C SPO13P23624 291 aa1.74□□□□□ -2.13
CCL1YPR025C DAS2Q12084 232 aa1.74□□□□□ -2.13
CCL1YPR025C YLR412C-AQ3E742 68 aa1.74□□□□□ -2.13
CCL1YPR025C CPR5P35176 225 aa1.73□□□□□ -2.13
CCL1YPR025C RPS28BP0C0X0 67 aaKnown RBP1.72□□□□□ -2.13
CCL1YPR025C SHE2P36068 246 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
CCL1YPR025C TTI2P47168 421 aa1.72□□□□□ -2.13
CCL1YPR025C SBH2P52871 88 aa1.72□□□□□ -2.13
CCL1YPR025C MPA43P53583 542 aaPredicted RBP1.72□□□□□ -2.13
CCL1YPR025C DIG2Q03373 323 aaKnown RBP1.72□□□□□ -2.13
CCL1YPR025C MZM1Q03429 123 aaPredicted RBP1.72□□□□□ -2.13
CCL1YPR025C VPS71Q03433 280 aa1.72□□□□□ -2.13
CCL1YPR025C MAK3Q03503 176 aa1.72□□□□□ -2.13
CCL1YPR025C PLP1Q04004 230 aa1.72□□□□□ -2.13
CCL1YPR025C THI74Q04083 370 aa1.72□□□□□ -2.13
CCL1YPR025C FYV12Q08559 129 aa1.72□□□□□ -2.13
CCL1YPR025C YDL180WQ12301 547 aa1.72□□□□□ -2.13
CCL1YPR025C RPS28AQ3E7X9 67 aaPredicted RBP1.72□□□□□ -2.13
CCL1YPR025C TIR1P10863 254 aa1.71□□□□□ -2.14
CCL1YPR025C NSP1P14907 823 aaKnown RBP1.71□□□□□ -2.14
CCL1YPR025C FYV4P38783 130 aaPredicted RBP1.71□□□□□ -2.14
CCL1YPR025C VMA22P38784 181 aa1.71□□□□□ -2.14
CCL1YPR025C TMA20P89886 181 aaPredicted RBP1.71□□□□□ -2.14
CCL1YPR025C YDC1Q02896 317 aa1.71□□□□□ -2.14
CCL1YPR025C YMR295CQ03559 197 aa1.71□□□□□ -2.14
CCL1YPR025C YPR202WQ08993 238 aa1.71□□□□□ -2.14
CCL1YPR025C RAD28Q12021 506 aa1.71□□□□□ -2.14
CCL1YPR025C EFG1Q3E705 233 aaKnown RBP1.71□□□□□ -2.14
CCL1YPR025C YOR1P53049 1477 aa1.7□□□□□ -2.14
CCL1YPR025C UBI4P0CG63 381 aaKnown RBP1.7□□□□□ -2.14
CCL1YPR025C PHO85P17157 305 aa1.7□□□□□ -2.14
CCL1YPR025C PAM17P36147 197 aa1.7□□□□□ -2.14
CCL1YPR025C TVP23P38962 199 aa1.7□□□□□ -2.14
CCL1YPR025C SPC25P40014 221 aa1.7□□□□□ -2.14
CCL1YPR025C YNL200CP40165 246 aaKnown RBP1.7□□□□□ -2.14
CCL1YPR025C ORM1P53224 222 aa1.7□□□□□ -2.14
CCL1YPR025C NQM1P53228 333 aaPredicted RBP1.7□□□□□ -2.14
CCL1YPR025C LSM3P57743 89 aaKnown RBP1.7□□□□□ -2.14
CCL1YPR025C CUE4Q04201 117 aaPredicted RBP1.7□□□□□ -2.14
CCL1YPR025C GAL83Q04739 417 aa1.7□□□□□ -2.14
CCL1YPR025C YMR253CQ04835 414 aa1.7□□□□□ -2.14
CCL1YPR025C IRC23Q08416 157 aa1.7□□□□□ -2.14
CCL1YPR025C BUB2P26448 306 aaPredicted RBP1.69□□□□□ -2.14
CCL1YPR025C UBC8P28263 218 aa1.69□□□□□ -2.14
CCL1YPR025C CUP9P41817 306 aa1.69□□□□□ -2.14
CCL1YPR025C SBH1P52870 82 aa1.69□□□□□ -2.14
CCL1YPR025C YNL033WP53964 284 aa1.69□□□□□ -2.14
CCL1YPR025C ATP20Q12233 115 aa1.69□□□□□ -2.14
CCL1YPR025C YLR046CQ12253 270 aa1.69□□□□□ -2.14
CCL1YPR025C SEC11P15367 167 aa1.68□□□□□ -2.14
CCL1YPR025C IDP1P21954 428 aaKnown RBP1.68□□□□□ -2.14
CCL1YPR025C STP22P25604 385 aa1.68□□□□□ -2.14
CCL1YPR025C SFK1P35735 353 aa1.68□□□□□ -2.14
CCL1YPR025C SRP102P36057 244 aaPredicted RBP1.68□□□□□ -2.14
CCL1YPR025C LSM1P47017 172 aaKnown RBP1.68□□□□□ -2.14
CCL1YPR025C XPT1P47165 209 aa1.68□□□□□ -2.14
CCL1YPR025C YGL101WP53144 215 aa1.68□□□□□ -2.14
CCL1YPR025C YDR476CQ03362 224 aa1.68□□□□□ -2.14
CCL1YPR025C SHH3Q04487 196 aa1.68□□□□□ -2.14
CCL1YPR025C PET54P10834 293 aa1.67□□□□□ -2.14
CCL1YPR025C RPL30P14120 105 aaKnown RBP1.67□□□□□ -2.14
CCL1YPR025C NUF2P33895 451 aa1.67□□□□□ -2.14
CCL1YPR025C NSA2P40078 261 aaKnown RBP1.67□□□□□ -2.14
CCL1YPR025C RNH202Q05635 350 aa1.67□□□□□ -2.14
CCL1YPR025C YOR214CQ12282 236 aa1.67□□□□□ -2.14
CCL1YPR025C PEX34P25584 144 aa1.66□□□□□ -2.14
CCL1YPR025C ACP1P32463 125 aa1.66□□□□□ -2.14
CCL1YPR025C RRT1P38192 103 aa1.66□□□□□ -2.14
CCL1YPR025C APQ12P40532 138 aa1.66□□□□□ -2.14
CCL1YPR025C RRP17Q04031 235 aaPredicted RBP1.66□□□□□ -2.14
CCL1YPR025C PST2Q12335 198 aaKnown RBP1.66□□□□□ -2.14
CCL1YPR025C UBR1P19812 1950 aa1.66□□□□□ -2.14
CCL1YPR025C MSB2P32334 1306 aa1.66□□□□□ -2.14
CCL1YPR025C ATP5P09457 212 aa1.65□□□□□ -2.15
CCL1YPR025C PTC1P35182 281 aa1.65□□□□□ -2.15
CCL1YPR025C YHL018WP38744 120 aaPredicted RBP1.65□□□□□ -2.15
CCL1YPR025C IPI1P38803 334 aaPredicted RBP1.65□□□□□ -2.15
CCL1YPR025C YPL073CP40323 161 aa1.65□□□□□ -2.15
CCL1YPR025C DLS1P40366 167 aa1.65□□□□□ -2.15
CCL1YPR025C GLR1P41921 483 aaKnown RBP1.65□□□□□ -2.15
CCL1YPR025C FIP1P45976 327 aa1.65□□□□□ -2.15
CCL1YPR025C MOG1P47123 218 aa1.65□□□□□ -2.15
CCL1YPR025C YKR005CQ02203 525 aa1.65□□□□□ -2.15
CCL1YPR025C VPS28Q02767 242 aa1.65□□□□□ -2.15
CCL1YPR025C YNL146C-AQ3E7Z1 64 aa1.65□□□□□ -2.15
CCL1YPR025C HSP30P25619 332 aa1.64□□□□□ -2.15
CCL1YPR025C TIM13P53299 105 aa1.64□□□□□ -2.15
CCL1YPR025C SYM1Q06563 197 aa1.64□□□□□ -2.15
CCL1YPR025C YHR007C-AQ07074 71 aa1.64□□□□□ -2.15
CCL1YPR025C PRP11Q07350 266 aaPredicted RBP1.64□□□□□ -2.15
CCL1YPR025C YOR381W-AQ3E804 55 aa1.64□□□□□ -2.15
CCL1YPR025C TRM3Q07527 1436 aa1.64□□□□□ -2.15
CCL1YPR025C YEL028WP39989 153 aa1.63□□□□□ -2.15
CCL1YPR025C UBC7Q02159 165 aa1.63□□□□□ -2.15
CCL1YPR025C FIT2Q08906 153 aa1.63□□□□□ -2.15
CCL1YPR025C YPR013CQ12145 317 aa1.63□□□□□ -2.15
CCL1YPR025C COX8P04039 78 aa1.62□□□□□ -2.15
CCL1YPR025C RAD6P06104 172 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms