RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C PEX30Q06169 523 aa2.67□□□□□ -1.98
RPA43YOR340C PIN3Q06449 215 aa2.67□□□□□ -1.98
RPA43YOR340C GPN3Q06543 272 aa2.67□□□□□ -1.98
RPA43YOR340C TFC7Q12415 435 aa2.67□□□□□ -1.98
RPA43YOR340C YOR192C-CQ3E736 78 aa2.67□□□□□ -1.98
RPA43YOR340C CCW14O13547 238 aa2.66□□□□□ -1.98
RPA43YOR340C RPB9P27999 122 aa2.66□□□□□ -1.98
RPA43YOR340C TMA19P35691 167 aaKnown RBP2.66□□□□□ -1.98
RPA43YOR340C YHL044WP38727 235 aa2.66□□□□□ -1.98
RPA43YOR340C PIR5P46999 287 aa2.66□□□□□ -1.98
RPA43YOR340C GPI14P47088 403 aaKnown RBP2.66□□□□□ -1.98
RPA43YOR340C YGL262WP53054 175 aa2.66□□□□□ -1.98
RPA43YOR340C MRH4P53166 561 aa2.66□□□□□ -1.98
RPA43YOR340C SDS23P53172 527 aa2.66□□□□□ -1.98
RPA43YOR340C YGR042WP53227 271 aa2.66□□□□□ -1.98
RPA43YOR340C ERV29P53337 310 aa2.66□□□□□ -1.98
RPA43YOR340C YNR064CP53750 290 aa2.66□□□□□ -1.98
RPA43YOR340C RPL21AQ02753 160 aaKnown RBP2.66□□□□□ -1.98
RPA43YOR340C RRP17Q04031 235 aaPredicted RBP2.66□□□□□ -1.98
RPA43YOR340C TSA2Q04120 196 aa2.66□□□□□ -1.98
RPA43YOR340C RIM9Q04734 239 aa2.66□□□□□ -1.98
RPA43YOR340C YOL118CQ08259 102 aa2.66□□□□□ -1.98
RPA43YOR340C QCR7P00128 127 aa2.65□□□□□ -1.99
RPA43YOR340C RPL25P04456 142 aaKnown RBP2.65□□□□□ -1.99
RPA43YOR340C SHE2P36068 246 aaKnown RBP RIP-Chip data2.65□□□□□ -1.99not detected
RPA43YOR340C HTD2P38790 280 aaKnown RBP2.65□□□□□ -1.99
RPA43YOR340C OTU1P43558 301 aa2.65□□□□□ -1.99
RPA43YOR340C YJL118WP47022 219 aa2.65□□□□□ -1.99
RPA43YOR340C BXI1P48558 297 aa2.65□□□□□ -1.99
RPA43YOR340C ATG17Q06410 417 aa2.65□□□□□ -1.99
RPA43YOR340C MSA1Q08471 629 aa2.65□□□□□ -1.99
RPA43YOR340C YOR186WQ08560 144 aa2.65□□□□□ -1.99
RPA43YOR340C RFM1Q12192 310 aa2.65□□□□□ -1.99
RPA43YOR340C ODC2Q99297 307 aa2.65□□□□□ -1.99
RPA43YOR340C TDH2P00358 332 aaKnown RBP2.64□□□□□ -1.99
RPA43YOR340C COX2P00410 251 aa2.64□□□□□ -1.99
RPA43YOR340C BUD23P25627 275 aaPredicted RBP2.64□□□□□ -1.99
RPA43YOR340C HOM6P31116 359 aaKnown RBP2.64□□□□□ -1.99
RPA43YOR340C YBL010CP32788 280 aa2.64□□□□□ -1.99
RPA43YOR340C SPT4P32914 102 aaPredicted RBP2.64□□□□□ -1.99
RPA43YOR340C SMP1P38128 452 aa2.64□□□□□ -1.99
RPA43YOR340C FMP23P38231 175 aa2.64□□□□□ -1.99
RPA43YOR340C CAT5P41735 233 aa2.64□□□□□ -1.99
RPA43YOR340C BNA6P43619 295 aa2.64□□□□□ -1.99
RPA43YOR340C CWC23P52868 283 aaPredicted RBP2.64□□□□□ -1.99
RPA43YOR340C CPD1P53314 239 aa2.64□□□□□ -1.99
RPA43YOR340C YNR066CP53752 436 aa2.64□□□□□ -1.99
RPA43YOR340C CTF19Q02732 369 aa2.64□□□□□ -1.99
RPA43YOR340C PRM15Q03262 622 aa2.64□□□□□ -1.99
RPA43YOR340C KEI1Q06346 221 aa2.64□□□□□ -1.99
RPA43YOR340C MSH5Q12175 901 aa2.64□□□□□ -1.99
RPA43YOR340C RAX2Q12465 1220 aa2.64□□□□□ -1.99
RPA43YOR340C IFM1P25038 676 aa2.63□□□□□ -1.99
RPA43YOR340C ATG22P25568 528 aa2.63□□□□□ -1.99
RPA43YOR340C OCH1P31755 480 aa2.63□□□□□ -1.99
RPA43YOR340C RPB7P34087 171 aa2.63□□□□□ -1.99
RPA43YOR340C CUE1P38428 203 aa2.63□□□□□ -1.99
RPA43YOR340C PRS2P38620 318 aaKnown RBP2.63□□□□□ -1.99
RPA43YOR340C RRT13P40042 185 aa2.63□□□□□ -1.99
RPA43YOR340C CCS1P40202 249 aaKnown RBP2.63□□□□□ -1.99
RPA43YOR340C SYS1P41544 203 aa2.63□□□□□ -1.99
RPA43YOR340C RBL2P48606 106 aaKnown RBP2.63□□□□□ -1.99
RPA43YOR340C HSK3P69852 69 aa2.63□□□□□ -1.99
RPA43YOR340C YPL067CQ02754 198 aa2.63□□□□□ -1.99
RPA43YOR340C YMR166CQ03829 368 aa2.63□□□□□ -1.99
RPA43YOR340C VBA1Q04301 562 aa2.63□□□□□ -1.99
RPA43YOR340C DPP1Q05521 289 aa2.63□□□□□ -1.99
RPA43YOR340C UPS1Q05776 175 aa2.63□□□□□ -1.99
RPA43YOR340C PRP11Q07350 266 aaPredicted RBP2.63□□□□□ -1.99
RPA43YOR340C MCH1Q07376 486 aa2.63□□□□□ -1.99
RPA43YOR340C YOL029CQ08187 201 aa2.63□□□□□ -1.99
RPA43YOR340C YOR283WQ12040 230 aaKnown RBP2.63□□□□□ -1.99
RPA43YOR340C URA6P15700 204 aa2.62□□□□□ -1.99
RPA43YOR340C SEN2P16658 377 aa2.62□□□□□ -1.99
RPA43YOR340C MRPS28P21771 286 aa2.62□□□□□ -1.99
RPA43YOR340C DPB2P24482 689 aaPredicted RBP2.62□□□□□ -1.99
RPA43YOR340C RNP1P32385 249 aa2.62□□□□□ -1.99
RPA43YOR340C FMT1P32785 401 aa2.62□□□□□ -1.99
RPA43YOR340C HPA3P39979 161 aa2.62□□□□□ -1.99
RPA43YOR340C SMB1P40018 196 aaKnown RBP2.62□□□□□ -1.99
RPA43YOR340C XPT1P47165 209 aa2.62□□□□□ -1.99
RPA43YOR340C HNT1Q04344 158 aaKnown RBP2.62□□□□□ -1.99
RPA43YOR340C FIT1Q04433 528 aa2.62□□□□□ -1.99
RPA43YOR340C ADH6Q04894 360 aaKnown RBP2.62□□□□□ -1.99
RPA43YOR340C FCY1Q12178 158 aa2.62□□□□□ -1.99
RPA43YOR340C ATO3Q12359 275 aa2.62□□□□□ -1.99
RPA43YOR340C SUS1Q6WNK7 96 aa2.62□□□□□ -1.99
RPA43YOR340C YAL067W-AQ8TGK6 75 aa2.62□□□□□ -1.99
RPA43YOR340C ATG40Q99325 256 aa2.62□□□□□ -1.99
RPA43YOR340C SOD1P00445 154 aaKnown RBP2.61□□□□□ -1.99
RPA43YOR340C POF1P25576 258 aa2.61□□□□□ -1.99
RPA43YOR340C SPT14P32363 452 aa2.61□□□□□ -1.99
RPA43YOR340C CPR5P35176 225 aa2.61□□□□□ -1.99
RPA43YOR340C MBA1P38300 278 aa2.61□□□□□ -1.99
RPA43YOR340C YER188WP40103 239 aa2.61□□□□□ -1.99
RPA43YOR340C SER2P42941 309 aa2.61□□□□□ -1.99
RPA43YOR340C GNA1P43577 159 aaPredicted RBP2.61□□□□□ -1.99
RPA43YOR340C YAR1P46683 200 aa2.61□□□□□ -1.99
RPA43YOR340C IRC18P47056 224 aa2.61□□□□□ -1.99
RPA43YOR340C DIE2P50076 525 aa2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms