RNA–Protein interactions for RNA: YLR007W

NSE1, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene NSE1, Length 1,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSE1YLR007W PRE7P23724 241 aaKnown RBP3.31□□□□□ -1.88
NSE1YLR007W PTC1P35182 281 aa3.31□□□□□ -1.88
NSE1YLR007W YER181CP40097 107 aa3.31□□□□□ -1.88
NSE1YLR007W AIF1P52923 378 aa3.31□□□□□ -1.88
NSE1YLR007W AIM36Q03798 255 aa3.31□□□□□ -1.88
NSE1YLR007W YLR099W-AQ3E798 87 aa3.31□□□□□ -1.88
NSE1YLR007W REP2P03872 296 aa3.3□□□□□ -1.88
NSE1YLR007W CPA1P07258 411 aaKnown RBP3.3□□□□□ -1.88
NSE1YLR007W NSP1P14907 823 aaKnown RBP3.3□□□□□ -1.88
NSE1YLR007W RPB9P27999 122 aa3.3□□□□□ -1.88
NSE1YLR007W SUI1P32911 108 aaKnown RBP3.3□□□□□ -1.88
NSE1YLR007W ARC15P40518 154 aaRIP-Chip data3.3□□□□□ -1.88not detected
NSE1YLR007W YFL019CP43576 117 aa3.3□□□□□ -1.88
NSE1YLR007W YGR017WP53210 297 aa3.3□□□□□ -1.88
NSE1YLR007W APJ1P53940 528 aa3.3□□□□□ -1.88
NSE1YLR007W YNL033WP53964 284 aa3.3□□□□□ -1.88
NSE1YLR007W YNL019CP53975 284 aa3.3□□□□□ -1.88
NSE1YLR007W MRPS16Q02608 121 aa3.3□□□□□ -1.88
NSE1YLR007W MCH1Q07376 486 aa3.3□□□□□ -1.88
NSE1YLR007W YLR118CQ12354 227 aa3.3□□□□□ -1.88
NSE1YLR007W PSF1Q12488 208 aa3.3□□□□□ -1.88
NSE1YLR007W COX4P04037 155 aa3.29□□□□□ -1.88
NSE1YLR007W RPL9AP05738 191 aaKnown RBP3.29□□□□□ -1.88
NSE1YLR007W SGA1P08019 549 aa3.29□□□□□ -1.88
NSE1YLR007W HSP26P15992 214 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
NSE1YLR007W PHO13P19881 312 aa3.29□□□□□ -1.88
NSE1YLR007W ATP15P21306 62 aa3.29□□□□□ -1.88
NSE1YLR007W SPT14P32363 452 aa3.29□□□□□ -1.88
NSE1YLR007W YHR140WP38842 239 aa3.29□□□□□ -1.88
NSE1YLR007W RPL9BP51401 191 aaKnown RBP3.29□□□□□ -1.88
NSE1YLR007W VPS28Q02767 242 aa3.29□□□□□ -1.88
NSE1YLR007W SPP41P38904 1435 aa3.28□□□□□ -1.88
NSE1YLR007W TIM9O74700 87 aa3.28□□□□□ -1.88
NSE1YLR007W MRPL27P36526 146 aaPredicted RBP3.28□□□□□ -1.88
NSE1YLR007W MRPL17P36528 281 aa3.28□□□□□ -1.88
NSE1YLR007W YBR220CP38318 560 aa3.28□□□□□ -1.88
NSE1YLR007W HTD2P38790 280 aaKnown RBP3.28□□□□□ -1.88
NSE1YLR007W YHR125WP38831 101 aa3.28□□□□□ -1.88
NSE1YLR007W SFT1P43682 97 aa3.28□□□□□ -1.88
NSE1YLR007W SBH1P52870 82 aa3.28□□□□□ -1.88
NSE1YLR007W TMA23Q03525 211 aa3.28□□□□□ -1.88
NSE1YLR007W HSL1P34244 1518 aa3.28□□□□□ -1.88
NSE1YLR007W SSN2P38931 1420 aa3.27□□□□□ -1.89
NSE1YLR007W TSC11P40061 1430 aa3.27□□□□□ -1.89
NSE1YLR007W TRM3Q07527 1436 aa3.27□□□□□ -1.89
NSE1YLR007W MYO2P19524 1574 aaKnown RBP3.27□□□□□ -1.89
NSE1YLR007W YAR023CD6VPM8 179 aa3.27□□□□□ -1.89
NSE1YLR007W COX10P21592 462 aa3.27□□□□□ -1.89
NSE1YLR007W VTC1P40046 129 aaRIP-Chip data3.27□□□□□ -1.89not detected
NSE1YLR007W RPS12P48589 143 aaKnown RBP3.27□□□□□ -1.89
NSE1YLR007W YDR274CP87283 123 aa3.27□□□□□ -1.89
NSE1YLR007W MRPS8Q03799 155 aa3.27□□□□□ -1.89
NSE1YLR007W NAT3Q06504 195 aa3.27□□□□□ -1.89
NSE1YLR007W RAD6P06104 172 aa3.26□□□□□ -1.89
NSE1YLR007W TOM40P23644 387 aaKnown RBP3.26□□□□□ -1.89
NSE1YLR007W AHT1P29589 182 aa3.26□□□□□ -1.89
NSE1YLR007W SHB17P36136 271 aaKnown RBP3.26□□□□□ -1.89
NSE1YLR007W YER188WP40103 239 aa3.26□□□□□ -1.89
NSE1YLR007W YJL218WP40892 196 aaKnown RBP3.26□□□□□ -1.89
NSE1YLR007W FCF2Q12035 217 aaPredicted RBP3.26□□□□□ -1.89
NSE1YLR007W ODC2Q99297 307 aa3.26□□□□□ -1.89
NSE1YLR007W TY1B-HO13535 1793 aa3.25□□□□□ -1.89
NSE1YLR007W RAD10P06838 210 aa3.25□□□□□ -1.89
NSE1YLR007W HYM1P32464 399 aa3.25□□□□□ -1.89
NSE1YLR007W LHP1P33399 275 aaKnown RBP3.25□□□□□ -1.89
NSE1YLR007W YHL026CP38740 315 aa3.25□□□□□ -1.89
NSE1YLR007W NSA2P40078 261 aaKnown RBP3.25□□□□□ -1.89
NSE1YLR007W GVP36P40531 326 aaKnown RBP3.25□□□□□ -1.89
NSE1YLR007W BUD25P85052 153 aa3.25□□□□□ -1.89
NSE1YLR007W YKR005CQ02203 525 aa3.25□□□□□ -1.89
NSE1YLR007W RSM10Q03201 203 aa3.25□□□□□ -1.89
NSE1YLR007W KTI11Q3E840 82 aa3.25□□□□□ -1.89
NSE1YLR007W AUS1Q08409 1394 aa3.25□□□□□ -1.89
NSE1YLR007W YBL010CP32788 280 aa3.24□□□□□ -1.89
NSE1YLR007W YOR062CP36025 268 aa3.24□□□□□ -1.89
NSE1YLR007W ETR1P38071 380 aa3.24□□□□□ -1.89
NSE1YLR007W UMP1P38293 148 aa3.24□□□□□ -1.89
NSE1YLR007W YNL200CP40165 246 aaKnown RBP3.24□□□□□ -1.89
NSE1YLR007W EMC4P53073 190 aa3.24□□□□□ -1.89
NSE1YLR007W YGR026WP53217 278 aa3.24□□□□□ -1.89
NSE1YLR007W EST3Q03096 181 aa3.24□□□□□ -1.89
NSE1YLR007W YMR295CQ03559 197 aa3.24□□□□□ -1.89
NSE1YLR007W GAL83Q04739 417 aa3.24□□□□□ -1.89
NSE1YLR007W FYV12Q08559 129 aa3.24□□□□□ -1.89
NSE1YLR007W HSP12P22943 109 aaKnown RBP3.23□□□□□ -1.89
NSE1YLR007W YPT31P38555 223 aaKnown RBP3.23□□□□□ -1.89
NSE1YLR007W YER135CP40082 130 aa3.23□□□□□ -1.89
NSE1YLR007W CUP9P41817 306 aa3.23□□□□□ -1.89
NSE1YLR007W ECO1P43605 281 aa3.23□□□□□ -1.89
NSE1YLR007W SYM1Q06563 197 aa3.23□□□□□ -1.89
NSE1YLR007W ZEO1Q08245 113 aa3.23□□□□□ -1.89
NSE1YLR007W FSF1Q12029 327 aaKnown RBP3.23□□□□□ -1.89
NSE1YLR007W YCL001W-BQ96VH2 84 aa3.23□□□□□ -1.89
NSE1YLR007W SAS5Q99314 248 aa3.23□□□□□ -1.89
NSE1YLR007W FKS1P38631 1876 aaKnown RBP3.22□□□□□ -1.89
NSE1YLR007W BUD4P47136 1447 aa3.22□□□□□ -1.89
NSE1YLR007W POR1P04840 283 aaKnown RBP3.22□□□□□ -1.89
NSE1YLR007W RPS19AP07280 144 aaKnown RBP3.22□□□□□ -1.89
NSE1YLR007W RPS19BP07281 144 aaPredicted RBP3.22□□□□□ -1.89
NSE1YLR007W YHR032W-AP0C5N6 59 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms