RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C DAP1Q12091 152 aa2.01□□□□□ -2.09
VPS13YLL040C TY1A-ORP0CX59 440 aa2□□□□□ -2.09
VPS13YLL040C TY1A-PR2P0CX60 440 aa2□□□□□ -2.09
VPS13YLL040C HAP3P13434 144 aa2□□□□□ -2.09
VPS13YLL040C RPI1P23250 407 aaKnown RBP2□□□□□ -2.09
VPS13YLL040C CSH1P38287 376 aa2□□□□□ -2.09
VPS13YLL040C YPS6P40583 537 aa2□□□□□ -2.09
VPS13YLL040C MGR2Q02889 113 aa2□□□□□ -2.09
VPS13YLL040C ADD37Q03233 198 aa2□□□□□ -2.09
VPS13YLL040C IZH1Q03419 316 aa2□□□□□ -2.09
VPS13YLL040C YKL107WP34251 309 aa2□□□□□ -2.09
VPS13YLL040C GPP2P40106 250 aaKnown RBP2□□□□□ -2.09
VPS13YLL040C CDC40P40968 455 aaPredicted RBP2□□□□□ -2.09
VPS13YLL040C UBC13P52490 153 aa2□□□□□ -2.09
VPS13YLL040C SDH7Q04401 133 aa2□□□□□ -2.09
VPS13YLL040C DAL4Q04895 635 aa2□□□□□ -2.09
VPS13YLL040C YBR220CP38318 560 aa2□□□□□ -2.09
VPS13YLL040C GAT2P40209 560 aa2□□□□□ -2.09
VPS13YLL040C YGR050CP53231 118 aa2□□□□□ -2.09
VPS13YLL040C YNL046WP53956 172 aa2□□□□□ -2.09
VPS13YLL040C CGI121Q03705 181 aaKnown RBP2□□□□□ -2.09
VPS13YLL040C HRT1Q08273 121 aa2□□□□□ -2.09
VPS13YLL040C ALG6Q12001 544 aaKnown RBP2□□□□□ -2.09
VPS13YLL040C FMP49A0A023PZB3 126 aa2□□□□□ -2.09
VPS13YLL040C MBF1O14467 151 aaKnown RBP2□□□□□ -2.09
VPS13YLL040C SEC62P21825 274 aa2□□□□□ -2.09
VPS13YLL040C YER079WP40052 210 aaKnown RBP2□□□□□ -2.09
VPS13YLL040C GIM5Q04493 163 aa2□□□□□ -2.09
VPS13YLL040C KIN28P06242 306 aa2□□□□□ -2.09
VPS13YLL040C BDH1P39714 382 aa2□□□□□ -2.09
VPS13YLL040C ERS1P17261 260 aa2□□□□□ -2.09
VPS13YLL040C YPS1P32329 569 aa2□□□□□ -2.09
VPS13YLL040C DER1P38307 211 aa2□□□□□ -2.09
VPS13YLL040C BET5Q03630 159 aa2□□□□□ -2.09
VPS13YLL040C POS5Q06892 414 aa2□□□□□ -2.09
VPS13YLL040C RRT7Q07829 113 aa2□□□□□ -2.09
VPS13YLL040C RPS14AP06367 137 aaKnown RBP2□□□□□ -2.09
VPS13YLL040C RML2P32611 393 aa2□□□□□ -2.09
VPS13YLL040C RPS14BP39516 138 aaKnown RBP2□□□□□ -2.09
VPS13YLL040C YPL073CP40323 161 aa2□□□□□ -2.09
VPS13YLL040C BNA2P47125 453 aa2□□□□□ -2.09
VPS13YLL040C YIP1P53039 248 aa2□□□□□ -2.09
VPS13YLL040C BET2P20133 325 aa2□□□□□ -2.09
VPS13YLL040C AIM29P36154 155 aa2□□□□□ -2.09
VPS13YLL040C YGR018CP53211 109 aa2□□□□□ -2.09
VPS13YLL040C COX18P53239 316 aa2□□□□□ -2.09
VPS13YLL040C AGA2P32781 87 aa1.99□□□□□ -2.09
VPS13YLL040C YHL037CP38733 133 aa1.99□□□□□ -2.09
VPS13YLL040C MRL1Q06815 381 aa1.99□□□□□ -2.09
VPS13YLL040C ERG27Q12452 347 aaKnown RBP1.99□□□□□ -2.09
VPS13YLL040C COX5BP00425 151 aa1.99□□□□□ -2.09
VPS13YLL040C ARF1P11076 181 aaKnown RBP1.99□□□□□ -2.09
VPS13YLL040C FIG1P38224 298 aa1.99□□□□□ -2.09
VPS13YLL040C YJL163CP46996 555 aa1.99□□□□□ -2.09
VPS13YLL040C YDL183CP48569 320 aa1.99□□□□□ -2.09
VPS13YLL040C YDR042CQ03205 200 aa1.99□□□□□ -2.09
VPS13YLL040C HUG1Q6Q5K6 68 aa1.99□□□□□ -2.09
VPS13YLL040C DDI2P0CH63 225 aa1.99□□□□□ -2.09
VPS13YLL040C DDI3P0CH64 225 aa1.99□□□□□ -2.09
VPS13YLL040C TOS6P48560 102 aa1.99□□□□□ -2.09
VPS13YLL040C YCL001W-BQ96VH2 84 aa1.99□□□□□ -2.09
VPS13YLL040C SPT15P13393 240 aaKnown RBP1.99□□□□□ -2.09
VPS13YLL040C QDR3P38227 689 aa1.99□□□□□ -2.09
VPS13YLL040C LCB3P47013 409 aa1.99□□□□□ -2.09
VPS13YLL040C RPN14P53196 417 aa1.99□□□□□ -2.09
VPS13YLL040C RIM9Q04734 239 aa1.99□□□□□ -2.09
VPS13YLL040C RKI1Q12189 258 aa1.99□□□□□ -2.09
VPS13YLL040C RIB5P38145 238 aa1.99□□□□□ -2.09
VPS13YLL040C YPT10P38146 199 aa1.99□□□□□ -2.09
VPS13YLL040C OST1P41543 476 aaKnown RBP1.99□□□□□ -2.09
VPS13YLL040C TAF4P50105 388 aa1.99□□□□□ -2.09
VPS13YLL040C YDL218WQ07629 317 aa1.99□□□□□ -2.09
VPS13YLL040C URA5P13298 226 aaKnown RBP1.99□□□□□ -2.09
VPS13YLL040C PRE1P22141 198 aaKnown RBP1.99□□□□□ -2.09
VPS13YLL040C YJR015WP47090 510 aa1.99□□□□□ -2.09
VPS13YLL040C MSC3Q05812 728 aa1.99□□□□□ -2.09
VPS13YLL040C TPT1Q12272 230 aaKnown RBP1.99□□□□□ -2.09
VPS13YLL040C YHL044WP38727 235 aa1.99□□□□□ -2.09
VPS13YLL040C GLC8P41818 229 aa1.99□□□□□ -2.09
VPS13YLL040C YHC3P47040 408 aa1.99□□□□□ -2.09
VPS13YLL040C YGR149WP48236 432 aa1.99□□□□□ -2.09
VPS13YLL040C YNR040WP53736 256 aa1.99□□□□□ -2.09
VPS13YLL040C GRH1Q04410 372 aaKnown RBP1.99□□□□□ -2.09
VPS13YLL040C PUP1P25043 261 aa1.98□□□□□ -2.09
VPS13YLL040C EHT1P38295 451 aa1.98□□□□□ -2.09
VPS13YLL040C FLO5P38894 1075 aa1.98□□□□□ -2.09
VPS13YLL040C PAU7P39545 55 aa1.98□□□□□ -2.09
VPS13YLL040C BNA1P47096 177 aa1.98□□□□□ -2.09
VPS13YLL040C SUT1P53032 299 aaKnown RBP1.98□□□□□ -2.09
VPS13YLL040C YDL157CQ12082 118 aa1.98□□□□□ -2.09
VPS13YLL040C HMS1Q12398 434 aa1.98□□□□□ -2.09
VPS13YLL040C MPD1Q12404 318 aaKnown RBP1.98□□□□□ -2.09
VPS13YLL040C RPP2AP05319 106 aaKnown RBP1.98□□□□□ -2.09
VPS13YLL040C RFM1Q12192 310 aa1.98□□□□□ -2.09
VPS13YLL040C TIP1P27654 210 aaPredicted RBP1.98□□□□□ -2.09
VPS13YLL040C MED6P38782 295 aa1.98□□□□□ -2.09
VPS13YLL040C YDR215CQ12240 137 aa1.98□□□□□ -2.09
VPS13YLL040C SMT3Q12306 101 aaKnown RBP1.98□□□□□ -2.09
VPS13YLL040C YNL194CP40169 301 aa1.98□□□□□ -2.09
VPS13YLL040C PRE5P40302 234 aaKnown RBP1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms