RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W SDT1P53078 280 aa1.84□□□□□ -2.11
SNU114YKL173W LSM7P53905 115 aaKnown RBP1.84□□□□□ -2.11
SNU114YKL173W RPL21AQ02753 160 aaKnown RBP1.84□□□□□ -2.11
SNU114YKL173W DIG2Q03373 323 aaKnown RBP1.84□□□□□ -2.11
SNU114YKL173W RAV2Q03956 351 aa1.84□□□□□ -2.11
SNU114YKL173W YDR278CQ05612 105 aa1.84□□□□□ -2.11
SNU114YKL173W ATG39Q06159 398 aa1.84□□□□□ -2.11
SNU114YKL173W DFM1Q12743 341 aaKnown RBP1.84□□□□□ -2.11
SNU114YKL173W YAL067W-AQ8TGK6 75 aa1.84□□□□□ -2.11
SNU114YKL173W IGO2Q9P305 131 aa1.84□□□□□ -2.11
SNU114YKL173W PSK1P31374 1356 aa1.84□□□□□ -2.11
SNU114YKL173W VAR1P02381 398 aa1.84□□□□□ -2.12
SNU114YKL173W RPL2AP0CX45 254 aaKnown RBP1.84□□□□□ -2.12
SNU114YKL173W RPL2BP0CX46 254 aaKnown RBP1.84□□□□□ -2.12
SNU114YKL173W PHO85P17157 305 aa1.84□□□□□ -2.12
SNU114YKL173W TRX3P25372 127 aa1.84□□□□□ -2.12
SNU114YKL173W LDB16P25587 256 aa1.84□□□□□ -2.12
SNU114YKL173W TKL2P33315 681 aa1.84□□□□□ -2.12
SNU114YKL173W ZRT3P34240 503 aa1.84□□□□□ -2.12
SNU114YKL173W CSH1P38287 376 aa1.84□□□□□ -2.12
SNU114YKL173W YPT31P38555 223 aaKnown RBP1.84□□□□□ -2.12
SNU114YKL173W RPF1P38805 295 aaKnown RBP1.84□□□□□ -2.12
SNU114YKL173W AIM18P38884 321 aa1.84□□□□□ -2.12
SNU114YKL173W HHO1P53551 258 aa1.84□□□□□ -2.12
SNU114YKL173W YPL039WQ03080 316 aa1.84□□□□□ -2.12
SNU114YKL173W YDR124WQ04608 324 aa1.84□□□□□ -2.12
SNU114YKL173W TFC7Q12415 435 aa1.84□□□□□ -2.12
SNU114YKL173W YGL194C-AQ2V2P6 80 aa1.84□□□□□ -2.12
SNU114YKL173W PMD1P32634 1753 aa1.83□□□□□ -2.12
SNU114YKL173W SPO13P23624 291 aa1.83□□□□□ -2.12
SNU114YKL173W ATG22P25568 528 aa1.83□□□□□ -2.12
SNU114YKL173W YKL102CP34249 101 aa1.83□□□□□ -2.12
SNU114YKL173W GGC1P38988 300 aa1.83□□□□□ -2.12
SNU114YKL173W HMF1P40037 129 aaKnown RBP1.83□□□□□ -2.12
SNU114YKL173W RNH201P53942 307 aa1.83□□□□□ -2.12
SNU114YKL173W EMI1Q04406 187 aa1.83□□□□□ -2.12
SNU114YKL173W INM2Q05533 292 aa1.83□□□□□ -2.12
SNU114YKL173W PRR2Q12310 699 aa1.83□□□□□ -2.12
SNU114YKL173W TIM22Q12328 207 aa1.83□□□□□ -2.12
SNU114YKL173W SPS2P08459 502 aa1.83□□□□□ -2.12
SNU114YKL173W COX10P21592 462 aa1.83□□□□□ -2.12
SNU114YKL173W IMP1P28627 190 aa1.83□□□□□ -2.12
SNU114YKL173W MRPL15P36523 253 aa1.83□□□□□ -2.12
SNU114YKL173W YIL012WP40551 113 aa1.83□□□□□ -2.12
SNU114YKL173W IGD1P43598 195 aa1.83□□□□□ -2.12
SNU114YKL173W YGR050CP53231 118 aa1.83□□□□□ -2.12
SNU114YKL173W RSM27P53305 110 aa1.83□□□□□ -2.12
SNU114YKL173W CAB4P53332 305 aa1.83□□□□□ -2.12
SNU114YKL173W PGA1P53896 198 aa1.83□□□□□ -2.12
SNU114YKL173W YNL010WP53981 241 aaKnown RBP1.83□□□□□ -2.12
SNU114YKL173W YOL029CQ08187 201 aa1.83□□□□□ -2.12
SNU114YKL173W YPR011CQ12251 326 aa1.83□□□□□ -2.12
SNU114YKL173W MPD1Q12404 318 aaKnown RBP1.83□□□□□ -2.12
SNU114YKL173W NUM1Q00402 2748 aa1.83□□□□□ -2.12
SNU114YKL173W PBI2P0CT04 75 aaKnown RBP1.83□□□□□ -2.12
SNU114YKL173W STP22P25604 385 aa1.83□□□□□ -2.12
SNU114YKL173W LSM8P47093 109 aaKnown RBP1.83□□□□□ -2.12
SNU114YKL173W AIM25P47140 327 aa1.83□□□□□ -2.12
SNU114YKL173W YLR042CQ07990 161 aa1.83□□□□□ -2.12
SNU114YKL173W YDL180WQ12301 547 aa1.83□□□□□ -2.12
SNU114YKL173W COX5AP00424 153 aa1.82□□□□□ -2.12
SNU114YKL173W SFC1P33303 322 aa1.82□□□□□ -2.12
SNU114YKL173W YRA2P36036 203 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
SNU114YKL173W SRL3P36167 246 aa1.82□□□□□ -2.12
SNU114YKL173W PRE5P40302 234 aaKnown RBP1.82□□□□□ -2.12
SNU114YKL173W YPL073CP40323 161 aa1.82□□□□□ -2.12
SNU114YKL173W DLS1P40366 167 aa1.82□□□□□ -2.12
SNU114YKL173W MOB1P40484 314 aa1.82□□□□□ -2.12
SNU114YKL173W GVP36P40531 326 aaKnown RBP1.82□□□□□ -2.12
SNU114YKL173W MIC19P43594 170 aa1.82□□□□□ -2.12
SNU114YKL173W MNN5P46982 586 aa1.82□□□□□ -2.12
SNU114YKL173W DIE2P50076 525 aa1.82□□□□□ -2.12
SNU114YKL173W LSM3P57743 89 aaKnown RBP1.82□□□□□ -2.12
SNU114YKL173W OSH6Q02201 448 aa1.82□□□□□ -2.12
SNU114YKL173W VPS71Q03433 280 aa1.82□□□□□ -2.12
SNU114YKL173W THI74Q04083 370 aa1.82□□□□□ -2.12
SNU114YKL173W SHH4Q06236 168 aa1.82□□□□□ -2.12
SNU114YKL173W SUE1Q06524 206 aa1.82□□□□□ -2.12
SNU114YKL173W IES4Q08561 116 aa1.82□□□□□ -2.12
SNU114YKL173W YMR316C-AI2HB70 103 aa1.82□□□□□ -2.12
SNU114YKL173W COX4P04037 155 aa1.82□□□□□ -2.12
SNU114YKL173W TOM40P23644 387 aaKnown RBP1.82□□□□□ -2.12
SNU114YKL173W RNP1P32385 249 aa1.82□□□□□ -2.12
SNU114YKL173W APS1P35181 156 aa1.82□□□□□ -2.12
SNU114YKL173W YKR070WP36151 352 aaKnown RBP1.82□□□□□ -2.12
SNU114YKL173W MED6P38782 295 aa1.82□□□□□ -2.12
SNU114YKL173W AYR1P40471 297 aa1.82□□□□□ -2.12
SNU114YKL173W YGL039WP53183 348 aaKnown RBP1.82□□□□□ -2.12
SNU114YKL173W YGR039WP53225 103 aa1.82□□□□□ -2.12
SNU114YKL173W YGR219WP53307 113 aa1.82□□□□□ -2.12
SNU114YKL173W VPS28Q02767 242 aa1.82□□□□□ -2.12
SNU114YKL173W YMR253CQ04835 414 aa1.82□□□□□ -2.12
SNU114YKL173W SYC1Q08553 188 aaPredicted RBP1.82□□□□□ -2.12
SNU114YKL173W DGA1Q08650 418 aa1.82□□□□□ -2.12
SNU114YKL173W YER039C-AP0CD97 72 aa1.81□□□□□ -2.12
SNU114YKL173W SEC59P20048 519 aa1.81□□□□□ -2.12
SNU114YKL173W PTM1P32857 523 aa1.81□□□□□ -2.12
SNU114YKL173W YNL200CP40165 246 aaKnown RBP1.81□□□□□ -2.12
SNU114YKL173W SYS1P41544 203 aa1.81□□□□□ -2.12
SNU114YKL173W ARP3P47117 449 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms