RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAN1	YIR006C	TIR2	P33890	251 aa		4.08	□□□□□ -1.76
PAN1	YIR006C	RPS26A	P39938	119 aa	Known RBP	4.08	□□□□□ -1.76
PAN1	YIR006C	RPS26B	P39939	119 aa	Known RBP	4.08	□□□□□ -1.76
PAN1	YIR006C	PAU15	P40585	124 aa		4.08	□□□□□ -1.76
PAN1	YIR006C	CYT2	Q00873	224 aa		4.08	□□□□□ -1.76
PAN1	YIR006C	YRA1	Q12159	226 aa	Known RBP	4.08	□□□□□ -1.76
PAN1	YIR006C	SAL1	D6W196	494 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	ARO4	P32449	370 aa	Known RBP	4.07	□□□□□ -1.76
PAN1	YIR006C	RRT1	P38192	103 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	PRY3	P47033	881 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	SMM1	P53720	384 aa	Known RBP	4.07	□□□□□ -1.76
PAN1	YIR006C	SHH3	Q04487	196 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	SCS22	Q6Q595	175 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	MXR2	P25566	168 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	ECM14	P38836	430 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	PAU7	P39545	55 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	GET2	P40056	285 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	PRE5	P40302	234 aa	Known RBP	4.07	□□□□□ -1.76
PAN1	YIR006C	YDL183C	P48569	320 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	DIA1	P54005	336 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	HPF1	Q05164	967 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.07	□□□□□ -1.76
PAN1	YIR006C	PHO85	P17157	305 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	YIL163C	P40448	117 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	AGE2	P40529	298 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	SYM1	Q06563	197 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	RPS22A	P0C0W1	130 aa	Known RBP	4.07	□□□□□ -1.76
PAN1	YIR006C	VMA16	P23968	213 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	MRPL39	P36533	70 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	PAC1	P39946	494 aa	Known RBP	4.07	□□□□□ -1.76
PAN1	YIR006C	MPP6	P53725	186 aa	Predicted RBP	4.07	□□□□□ -1.76
PAN1	YIR006C	TVP18	Q04767	167 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	RAX2	Q12465	1220 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	YOR032W-A	Q8TGS1	66 aa		4.07	□□□□□ -1.76
PAN1	YIR006C	HTB1	P02293	131 aa	Known RBP	4.06	□□□□□ -1.76
PAN1	YIR006C	MIR1	P23641	311 aa	Known RBP	4.06	□□□□□ -1.76
PAN1	YIR006C	FEN2	P25621	512 aa	Known RBP	4.06	□□□□□ -1.76
PAN1	YIR006C	ABF2	Q02486	183 aa		4.06	□□□□□ -1.76
PAN1	YIR006C	COX2	P00410	251 aa		4.06	□□□□□ -1.76
PAN1	YIR006C	PAI3	P01094	68 aa		4.06	□□□□□ -1.76
PAN1	YIR006C	SCM4	P32564	187 aa		4.06	□□□□□ -1.76
PAN1	YIR006C	ZRT1	P32804	376 aa		4.06	□□□□□ -1.76
PAN1	YIR006C	YNR071C	P53757	342 aa		4.06	□□□□□ -1.76
PAN1	YIR006C	RPL34A	P87262	121 aa	Predicted RBP	4.06	□□□□□ -1.76
PAN1	YIR006C	YMR082C	Q04276	118 aa		4.06	□□□□□ -1.76
PAN1	YIR006C	DAL4	Q04895	635 aa		4.06	□□□□□ -1.76
PAN1	YIR006C	YDR344C	Q05510	147 aa		4.06	□□□□□ -1.76
PAN1	YIR006C	ATG39	Q06159	398 aa		4.06	□□□□□ -1.76
PAN1	YIR006C	TMA10	Q06177	86 aa		4.06	□□□□□ -1.76
PAN1	YIR006C	POS5	Q06892	414 aa		4.06	□□□□□ -1.76
PAN1	YIR006C	Q0142	Q9ZZW4	58 aa		4.06	□□□□□ -1.76
PAN1	YIR006C	MRS1	P07266	363 aa		4.06	□□□□□ -1.76
PAN1	YIR006C	EMP70	P32802	667 aa		4.06	□□□□□ -1.76
PAN1	YIR006C	NAT5	Q08689	176 aa		4.06	□□□□□ -1.76
PAN1	YIR006C	POM34	Q12445	299 aa		4.06	□□□□□ -1.76
PAN1	YIR006C	SLO1	Q3E784	85 aa		4.06	□□□□□ -1.76
PAN1	YIR006C	ALG14	P38242	237 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	POP7	P38291	140 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	PIC2	P40035	300 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	OST3	P48439	350 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	TNA1	P53322	534 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	RPL21A	Q02753	160 aa	Known RBP	4.05	□□□□□ -1.76
PAN1	YIR006C	ELC1	Q03071	99 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	ARC18	Q05933	178 aa	Known RBP	4.05	□□□□□ -1.76
PAN1	YIR006C	RKI1	Q12189	258 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	RPL21B	Q12672	160 aa	Known RBP	4.05	□□□□□ -1.76
PAN1	YIR006C	YLR422W	Q06409	1932 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	SLH1	P53327	1967 aa	Known RBP	4.05	□□□□□ -1.76
PAN1	YIR006C	COQ3	P27680	312 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	SWD2	P36104	329 aa	Predicted RBP	4.05	□□□□□ -1.76
PAN1	YIR006C	GPI18	P38211	433 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	YGL235W	P53071	178 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	TDA7	P53882	636 aa	Predicted RBP	4.05	□□□□□ -1.76
PAN1	YIR006C	NCE102	Q12207	173 aa	RIP-Chip data	4.05	□□□□□ -1.76	not detected
PAN1	YIR006C	YLR363W-A	Q3E747	85 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	RPS22B	Q3E7Y3	130 aa	Known RBP	4.05	□□□□□ -1.76
PAN1	YIR006C	YLR365W	Q7LIF2	110 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	PRY2	P36110	329 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	SWD3	P38123	315 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	PSD1	P39006	500 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	GWT1	P47026	490 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	TAX4	P47030	604 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	DAD4	P69851	72 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	YMR253C	Q04835	414 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	YER188W	P40103	239 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	CIN5	P40917	295 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	LST7	P53237	242 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	DYN2	Q02647	92 aa		4.05	□□□□□ -1.76
PAN1	YIR006C	MDM10	P18409	493 aa		4.04	□□□□□ -1.76
PAN1	YIR006C	KEG1	P43614	200 aa		4.04	□□□□□ -1.76
PAN1	YIR006C	ERG2	P32352	222 aa		4.04	□□□□□ -1.76
PAN1	YIR006C	PAM17	P36147	197 aa		4.04	□□□□□ -1.76
PAN1	YIR006C	YHP1	Q04116	353 aa		4.04	□□□□□ -1.76
PAN1	YIR006C	PUT1	P09368	476 aa		4.04	□□□□□ -1.76
PAN1	YIR006C	NOP1	P15646	327 aa	Known RBP	4.04	□□□□□ -1.76
PAN1	YIR006C	PRE1	P22141	198 aa	Known RBP	4.04	□□□□□ -1.76
PAN1	YIR006C	YER158C	P40095	573 aa		4.04	□□□□□ -1.76
PAN1	YIR006C	CAB4	P53332	305 aa		4.04	□□□□□ -1.76
PAN1	YIR006C	YNL165W	P53891	406 aa		4.04	□□□□□ -1.76
PAN1	YIR006C	EST3	Q03096	181 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 61 ms