RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W SNF6P18888 332 aa2.37□□□□□ -2.03
PTI1YGR156W CLB6P32943 380 aa2.37□□□□□ -2.03
PTI1YGR156W CLG1P35190 452 aa2.37□□□□□ -2.03
PTI1YGR156W CAF4P36130 643 aa2.37□□□□□ -2.03
PTI1YGR156W YKR041WP36134 250 aa2.37□□□□□ -2.03
PTI1YGR156W AST2P39945 430 aaKnown RBP2.37□□□□□ -2.03
PTI1YGR156W RMD6P39975 231 aa2.37□□□□□ -2.03
PTI1YGR156W COS6P53344 381 aa2.37□□□□□ -2.03
PTI1YGR156W YNL140CP53910 189 aa2.37□□□□□ -2.03
PTI1YGR156W SWP1Q02795 286 aa2.37□□□□□ -2.03
PTI1YGR156W NOC4Q06512 552 aaPredicted RBP2.37□□□□□ -2.03
PTI1YGR156W HRT1Q08273 121 aa2.37□□□□□ -2.03
PTI1YGR156W YPL162CQ12042 273 aa2.37□□□□□ -2.03
PTI1YGR156W YOR097CQ12274 175 aaPredicted RBP2.37□□□□□ -2.03
PTI1YGR156W EFG1Q3E705 233 aaKnown RBP2.37□□□□□ -2.03
PTI1YGR156W SIR2P06700 562 aa2.36□□□□□ -2.03
PTI1YGR156W PET9P18239 318 aaKnown RBP2.36□□□□□ -2.03
PTI1YGR156W VPS51P36116 164 aa2.36□□□□□ -2.03
PTI1YGR156W MAK5P38112 773 aaPredicted RBP2.36□□□□□ -2.03
PTI1YGR156W EDC3P39998 551 aaKnown RBP2.36□□□□□ -2.03
PTI1YGR156W ICE2P40499 491 aa2.36□□□□□ -2.03
PTI1YGR156W SNX4P47057 423 aa2.36□□□□□ -2.03
PTI1YGR156W PIR1Q03178 341 aa2.36□□□□□ -2.03
PTI1YGR156W YFR032C-BQ8TGU2 87 aa2.36□□□□□ -2.03
PTI1YGR156W GCY1P14065 312 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03 RIP-Chip
PTI1YGR156W TAH1P25638 111 aaPredicted RBP2.35□□□□□ -2.03
PTI1YGR156W MRPL15P36523 253 aa2.35□□□□□ -2.03
PTI1YGR156W YHR180WP38868 163 aa2.35□□□□□ -2.03
PTI1YGR156W PDS1P40316 373 aaPredicted RBP2.35□□□□□ -2.03
PTI1YGR156W SKI6P46948 246 aaPredicted RBP2.35□□□□□ -2.03
PTI1YGR156W CIS3P47001 227 aa2.35□□□□□ -2.03
PTI1YGR156W YLR460CP54007 376 aa2.35□□□□□ -2.03
PTI1YGR156W YMR315WQ04869 349 aaKnown RBP2.35□□□□□ -2.03
PTI1YGR156W NEJ1Q06148 342 aa2.35□□□□□ -2.03
PTI1YGR156W RIO1Q12196 484 aaKnown RBP2.35□□□□□ -2.03
PTI1YGR156W YDL085C-AQ3E7B7 68 aaKnown RBP2.35□□□□□ -2.03
PTI1YGR156W MBF1O14467 151 aaKnown RBP2.34□□□□□ -2.03
PTI1YGR156W MSW1P04803 379 aa2.34□□□□□ -2.03
PTI1YGR156W URA5P13298 226 aaKnown RBP2.34□□□□□ -2.03
PTI1YGR156W FBA1P14540 359 aaKnown RBP2.34□□□□□ -2.03
PTI1YGR156W ATP15P21306 62 aa2.34□□□□□ -2.03
PTI1YGR156W YCL042WP25572 119 aa2.34□□□□□ -2.03
PTI1YGR156W YCR090CP25654 182 aaKnown RBP2.34□□□□□ -2.03
PTI1YGR156W MEI4P29467 408 aa2.34□□□□□ -2.03
PTI1YGR156W TRR1P29509 319 aaKnown RBP2.34□□□□□ -2.03
PTI1YGR156W ARO7P32178 256 aa2.34□□□□□ -2.03
PTI1YGR156W MRPL17P36528 281 aa2.34□□□□□ -2.03
PTI1YGR156W HYR1P40581 163 aaKnown RBP2.34□□□□□ -2.03
PTI1YGR156W MNN5P46982 586 aa2.34□□□□□ -2.03
PTI1YGR156W ARP3P47117 449 aaKnown RBP2.34□□□□□ -2.03
PTI1YGR156W SLM2P53955 656 aa2.34□□□□□ -2.03
PTI1YGR156W ATG10Q07879 167 aa2.34□□□□□ -2.03
PTI1YGR156W GTT2Q12390 233 aa2.34□□□□□ -2.03
PTI1YGR156W IGO2Q9P305 131 aa2.34□□□□□ -2.03
PTI1YGR156W YPR096CO13587 100 aa2.33□□□□□ -2.04
PTI1YGR156W CPA1P07258 411 aaKnown RBP2.33□□□□□ -2.04
PTI1YGR156W SNF4P12904 322 aa2.33□□□□□ -2.04
PTI1YGR156W MRPS28P21771 286 aa2.33□□□□□ -2.04
PTI1YGR156W BET1P22804 142 aa2.33□□□□□ -2.04
PTI1YGR156W MGT1P26188 188 aa2.33□□□□□ -2.04
PTI1YGR156W VMA11P32842 164 aa2.33□□□□□ -2.04
PTI1YGR156W SKG1P36169 355 aa2.33□□□□□ -2.04
PTI1YGR156W FES1P38260 290 aa2.33□□□□□ -2.04
PTI1YGR156W GLE2P40066 365 aa2.33□□□□□ -2.04
PTI1YGR156W YER121WP40076 114 aa2.33□□□□□ -2.04
PTI1YGR156W AIF1P52923 378 aa2.33□□□□□ -2.04
PTI1YGR156W IGO1P53897 168 aa2.33□□□□□ -2.04
PTI1YGR156W LDB18Q07887 179 aa2.33□□□□□ -2.04
PTI1YGR156W TSC3Q3E790 80 aa2.33□□□□□ -2.04
PTI1YGR156W POL2P21951 2222 aaKnown RBP2.33□□□□□ -2.04
PTI1YGR156W TIM9O74700 87 aa2.32□□□□□ -2.04
PTI1YGR156W OCH1P31755 480 aa2.32□□□□□ -2.04
PTI1YGR156W SRP14P38985 146 aa2.32□□□□□ -2.04
PTI1YGR156W DOC1P53068 250 aa2.32□□□□□ -2.04
PTI1YGR156W YNR062CP53748 327 aa2.32□□□□□ -2.04
PTI1YGR156W RDS3Q06835 107 aaPredicted RBP2.32□□□□□ -2.04
PTI1YGR156W AHC2P25649 128 aa2.31□□□□□ -2.04
PTI1YGR156W MDH3P32419 343 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
PTI1YGR156W UMP1P38293 148 aa2.31□□□□□ -2.04
PTI1YGR156W AIM18P38884 321 aa2.31□□□□□ -2.04
PTI1YGR156W CYC2P38909 366 aa2.31□□□□□ -2.04
PTI1YGR156W YEL028WP39989 153 aa2.31□□□□□ -2.04
PTI1YGR156W YIL086CP40503 102 aa2.31□□□□□ -2.04
PTI1YGR156W FMP32P43557 207 aa2.31□□□□□ -2.04
PTI1YGR156W DSK2P48510 373 aa2.31□□□□□ -2.04
PTI1YGR156W ARO8P53090 500 aaKnown RBP2.31□□□□□ -2.04
PTI1YGR156W DAD3P69850 94 aa2.31□□□□□ -2.04
PTI1YGR156W HNT1Q04344 158 aaKnown RBP2.31□□□□□ -2.04
PTI1YGR156W YLR036CQ07986 203 aa2.31□□□□□ -2.04
PTI1YGR156W YLR050CQ12155 161 aaKnown RBP2.31□□□□□ -2.04
PTI1YGR156W YOR342CQ12182 319 aa2.31□□□□□ -2.04
PTI1YGR156W EMC6Q12431 108 aa2.31□□□□□ -2.04
PTI1YGR156W DDP1Q99321 188 aaKnown RBP2.31□□□□□ -2.04
PTI1YGR156W YOR062CP36025 268 aa2.3□□□□□ -2.04
PTI1YGR156W PGD1P40356 397 aa2.3□□□□□ -2.04
PTI1YGR156W GVP36P40531 326 aaKnown RBP2.3□□□□□ -2.04
PTI1YGR156W YJR111CP47148 283 aaKnown RBP2.3□□□□□ -2.04
PTI1YGR156W TDA4P47153 279 aa2.3□□□□□ -2.04
PTI1YGR156W EMC4P53073 190 aa2.3□□□□□ -2.04
PTI1YGR156W PGA1P53896 198 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms