RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM1	YDR120C	YJL016W	P47072	561 aa		2.7	□□□□□ -1.98
TRM1	YDR120C	BRR6	P53062	197 aa		2.7	□□□□□ -1.98
TRM1	YDR120C	YGL159W	P53110	370 aa		2.7	□□□□□ -1.98
TRM1	YDR120C	MPC1	P53157	130 aa	Known RBP	2.7	□□□□□ -1.98
TRM1	YDR120C	MIX17	Q03667	156 aa		2.7	□□□□□ -1.98
TRM1	YDR120C	FMN1	Q03778	218 aa		2.7	□□□□□ -1.98
TRM1	YDR120C	PEX12	Q04370	399 aa		2.7	□□□□□ -1.98
TRM1	YDR120C	FIT3	Q08907	204 aa		2.7	□□□□□ -1.98
TRM1	YDR120C	YOR343C	Q12484	108 aa		2.7	□□□□□ -1.98
TRM1	YDR120C	YHR214C-E	Q8TGK0	99 aa		2.7	□□□□□ -1.98
TRM1	YDR120C	PPA2	P28239	310 aa		2.69	□□□□□ -1.98
TRM1	YDR120C	UTR5	P32630	166 aa		2.69	□□□□□ -1.98
TRM1	YDR120C	YKL102C	P34249	101 aa		2.69	□□□□□ -1.98
TRM1	YDR120C	MSA2	P36157	363 aa		2.69	□□□□□ -1.98
TRM1	YDR120C	COS8	P38723	381 aa		2.69	□□□□□ -1.98
TRM1	YDR120C	MTW1	P39731	289 aa		2.69	□□□□□ -1.98
TRM1	YDR120C	YDR102C	Q03864	110 aa		2.69	□□□□□ -1.98
TRM1	YDR120C	BBP1	Q12365	385 aa		2.69	□□□□□ -1.98
TRM1	YDR120C	CDC10	P25342	322 aa	Known RBP	2.68	□□□□□ -1.98
TRM1	YDR120C	ARC19	P33204	171 aa	Known RBP	2.68	□□□□□ -1.98
TRM1	YDR120C	MCM22	P47167	239 aa		2.68	□□□□□ -1.98
TRM1	YDR120C	YJR146W	P47174	117 aa		2.68	□□□□□ -1.98
TRM1	YDR120C	YNR062C	P53748	327 aa		2.68	□□□□□ -1.98
TRM1	YDR120C	PET191	Q02772	108 aa		2.68	□□□□□ -1.98
TRM1	YDR120C	DYN3	Q04949	312 aa		2.68	□□□□□ -1.98
TRM1	YDR120C	YPR127W	Q06494	345 aa		2.68	□□□□□ -1.98
TRM1	YDR120C	CSI2	Q08054	341 aa		2.68	□□□□□ -1.98
TRM1	YDR120C	YPR202W	Q08993	238 aa		2.68	□□□□□ -1.98
TRM1	YDR120C	PET9	P18239	318 aa	Known RBP	2.68	□□□□□ -1.98
TRM1	YDR120C	ATP7	P30902	174 aa		2.68	□□□□□ -1.98
TRM1	YDR120C	ERG24	P32462	438 aa	Known RBP	2.68	□□□□□ -1.98
TRM1	YDR120C	MIC12	P38341	106 aa		2.68	□□□□□ -1.98
TRM1	YDR120C	COX15	P40086	486 aa		2.68	□□□□□ -1.98
TRM1	YDR120C	PRM15	Q03262	622 aa		2.68	□□□□□ -1.98
TRM1	YDR120C	DML1	Q03652	475 aa		2.68	□□□□□ -1.98
TRM1	YDR120C	RIM9	Q04734	239 aa		2.68	□□□□□ -1.98
TRM1	YDR120C	GGA1	Q06336	557 aa		2.68	□□□□□ -1.98
TRM1	YDR120C	RDS3	Q06835	107 aa	Predicted RBP	2.68	□□□□□ -1.98
TRM1	YDR120C	ARG80	P07249	177 aa		2.67	□□□□□ -1.98
TRM1	YDR120C	MRPS28	P21771	286 aa		2.67	□□□□□ -1.98
TRM1	YDR120C	ASF2	P32448	525 aa	Predicted RBP	2.67	□□□□□ -1.98
TRM1	YDR120C	RTC3	P38804	111 aa	Predicted RBP	2.67	□□□□□ -1.98
TRM1	YDR120C	HPM1	P40481	377 aa		2.67	□□□□□ -1.98
TRM1	YDR120C	GLR1	P41921	483 aa	Known RBP	2.67	□□□□□ -1.98
TRM1	YDR120C	IGO1	P53897	168 aa		2.67	□□□□□ -1.98
TRM1	YDR120C	YMR279C	Q03263	540 aa		2.67	□□□□□ -1.98
TRM1	YDR120C	RNH202	Q05635	350 aa		2.67	□□□□□ -1.98
TRM1	YDR120C	MSW1	P04803	379 aa		2.66	□□□□□ -1.98
TRM1	YDR120C	YMR31	P19955	123 aa		2.66	□□□□□ -1.98
TRM1	YDR120C	VMA11	P32842	164 aa		2.66	□□□□□ -1.98
TRM1	YDR120C	BAT2	P47176	376 aa	Known RBP	2.66	□□□□□ -1.98
TRM1	YDR120C	TOS8	P53147	276 aa		2.66	□□□□□ -1.98
TRM1	YDR120C	GRX3	Q03835	250 aa		2.66	□□□□□ -1.98
TRM1	YDR120C	UIP4	Q08926	304 aa		2.66	□□□□□ -1.98
TRM1	YDR120C	YCL048W-A	Q2V2Q2	79 aa		2.66	□□□□□ -1.98
TRM1	YDR120C	YKL068W-A	Q3E826	78 aa		2.66	□□□□□ -1.98
TRM1	YDR120C	ARC15	P40518	154 aa	RIP-Chip data	2.65	□□□□□ -1.98	not detected
TRM1	YDR120C	RMR1	P53060	241 aa		2.65	□□□□□ -1.98
TRM1	YDR120C	YGL235W	P53071	178 aa		2.65	□□□□□ -1.98
TRM1	YDR120C	YNL033W	P53964	284 aa		2.65	□□□□□ -1.98
TRM1	YDR120C	YNL019C	P53975	284 aa		2.65	□□□□□ -1.98
TRM1	YDR120C	MHF2	Q3E829	80 aa		2.65	□□□□□ -1.98
TRM1	YDR120C	TIM9	O74700	87 aa		2.65	□□□□□ -1.99
TRM1	YDR120C	Q0255	P03881	472 aa		2.65	□□□□□ -1.99
TRM1	YDR120C	YOL162W	P0CF19	215 aa		2.65	□□□□□ -1.99
TRM1	YDR120C	NHP6B	P11633	99 aa	Known RBP	2.65	□□□□□ -1.99
TRM1	YDR120C	CLG1	P35190	452 aa		2.65	□□□□□ -1.99
TRM1	YDR120C	RIB1	P38066	345 aa		2.65	□□□□□ -1.99
TRM1	YDR120C	MRPL49	P40858	161 aa	Predicted RBP	2.65	□□□□□ -1.99
TRM1	YDR120C	CAT5	P41735	233 aa		2.65	□□□□□ -1.99
TRM1	YDR120C	MIC26	P50087	233 aa		2.65	□□□□□ -1.99
TRM1	YDR120C	NSA1	P53136	463 aa	Predicted RBP	2.65	□□□□□ -1.99
TRM1	YDR120C	YNR064C	P53750	290 aa		2.65	□□□□□ -1.99
TRM1	YDR120C	BNA7	Q04066	261 aa		2.65	□□□□□ -1.99
TRM1	YDR120C	YPL257W	Q08974	193 aa		2.65	□□□□□ -1.99
TRM1	YDR120C	HTL1	Q9URQ5	78 aa		2.65	□□□□□ -1.99
TRM1	YDR120C	YHR139C-A	O13536	103 aa		2.64	□□□□□ -1.99
TRM1	YDR120C	DSF1	P0CX08	502 aa		2.64	□□□□□ -1.99
TRM1	YDR120C	YNR073C	P0CX09	502 aa		2.64	□□□□□ -1.99
TRM1	YDR120C	APA2	P22108	325 aa		2.64	□□□□□ -1.99
TRM1	YDR120C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
TRM1	YDR120C	NTG1	P31378	399 aa		2.64	□□□□□ -1.99
TRM1	YDR120C	YHR125W	P38831	101 aa		2.64	□□□□□ -1.99
TRM1	YDR120C	PEX17	P40155	199 aa		2.64	□□□□□ -1.99
TRM1	YDR120C	MPM1	P40364	252 aa		2.64	□□□□□ -1.99
TRM1	YDR120C	FLX1	P40464	311 aa		2.64	□□□□□ -1.99
TRM1	YDR120C	RPA43	P46669	326 aa		2.64	□□□□□ -1.99
TRM1	YDR120C	HAM1	P47119	197 aa	Known RBP	2.64	□□□□□ -1.99
TRM1	YDR120C	ILM1	P47155	203 aa		2.64	□□□□□ -1.99
TRM1	YDR120C	USB1	Q12208	290 aa	Known RBP	2.64	□□□□□ -1.99
TRM1	YDR120C	RPL39	P04650	51 aa		2.63	□□□□□ -1.99
TRM1	YDR120C	SCM4	P32564	187 aa		2.63	□□□□□ -1.99
TRM1	YDR120C	YBR063C	P38083	404 aa		2.63	□□□□□ -1.99
TRM1	YDR120C	RPS20	P38701	121 aa	Known RBP	2.63	□□□□□ -1.99
TRM1	YDR120C	TRM5	P38793	499 aa		2.63	□□□□□ -1.99
TRM1	YDR120C	CTR2	P38865	189 aa		2.63	□□□□□ -1.99
TRM1	YDR120C	SMD3	P43321	101 aa	Known RBP	2.63	□□□□□ -1.99
TRM1	YDR120C	DSK2	P48510	373 aa		2.63	□□□□□ -1.99
TRM1	YDR120C	YGL101W	P53144	215 aa		2.63	□□□□□ -1.99
TRM1	YDR120C	DIG2	Q03373	323 aa	Known RBP	2.63	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms