RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	YGL101W	P53144	215 aa		3.89	□□□□□ -1.79
LCB2	YDR062W	APJ1	P53940	528 aa		3.89	□□□□□ -1.79
LCB2	YDR062W	ECM11	Q04110	302 aa		3.89	□□□□□ -1.79
LCB2	YDR062W	YMR321C	Q04898	105 aa		3.89	□□□□□ -1.79
LCB2	YDR062W	FCF1	Q05498	189 aa	Predicted RBP	3.89	□□□□□ -1.79
LCB2	YDR062W	PSF1	Q12488	208 aa		3.89	□□□□□ -1.79
LCB2	YDR062W	RIF1	P29539	1916 aa		3.89	□□□□□ -1.79
LCB2	YDR062W	UBI4	P0CG63	381 aa	Known RBP	3.88	□□□□□ -1.79
LCB2	YDR062W	PBI2	P0CT04	75 aa	Known RBP	3.88	□□□□□ -1.79
LCB2	YDR062W	URA5	P13298	226 aa	Known RBP	3.88	□□□□□ -1.79
LCB2	YDR062W	PEX34	P25584	144 aa		3.88	□□□□□ -1.79
LCB2	YDR062W	YGR201C	P42936	225 aa		3.88	□□□□□ -1.79
LCB2	YDR062W	YGL088W	P53151	121 aa		3.88	□□□□□ -1.79
LCB2	YDR062W	IES4	Q08561	116 aa		3.88	□□□□□ -1.79
LCB2	YDR062W	RAD10	P06838	210 aa		3.87	□□□□□ -1.79
LCB2	YDR062W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
LCB2	YDR062W	PCL1	P24867	279 aa		3.87	□□□□□ -1.79
LCB2	YDR062W	YHR125W	P38831	101 aa		3.87	□□□□□ -1.79
LCB2	YDR062W	AIM2	P39721	246 aa		3.87	□□□□□ -1.79
LCB2	YDR062W	TIF34	P40217	347 aa	Known RBP	3.87	□□□□□ -1.79
LCB2	YDR062W	RFC2	P40348	353 aa		3.87	□□□□□ -1.79
LCB2	YDR062W	ARC15	P40518	154 aa	RIP-Chip data	3.87	□□□□□ -1.79	not detected
LCB2	YDR062W	MNN5	P46982	586 aa		3.87	□□□□□ -1.79
LCB2	YDR062W	RPL9A	P05738	191 aa	Known RBP	3.87	□□□□□ -1.79
LCB2	YDR062W	MEP2	P41948	499 aa		3.87	□□□□□ -1.79
LCB2	YDR062W	YFR045W	P43617	309 aa		3.87	□□□□□ -1.79
LCB2	YDR062W	TDA4	P47153	279 aa		3.87	□□□□□ -1.79
LCB2	YDR062W	SOL1	P50278	321 aa		3.87	□□□□□ -1.79
LCB2	YDR062W	RPL9B	P51401	191 aa	Known RBP	3.87	□□□□□ -1.79
LCB2	YDR062W	HAL1	Q01766	294 aa		3.87	□□□□□ -1.79
LCB2	YDR062W	RAV2	Q03956	351 aa		3.87	□□□□□ -1.79
LCB2	YDR062W	PIN3	Q06449	215 aa		3.87	□□□□□ -1.79
LCB2	YDR062W	YOR342C	Q12182	319 aa		3.87	□□□□□ -1.79
LCB2	YDR062W	YDL180W	Q12301	547 aa		3.87	□□□□□ -1.79
LCB2	YDR062W	FKS1	P38631	1876 aa	Known RBP	3.86	□□□□□ -1.79
LCB2	YDR062W	RPL2A	P0CX45	254 aa	Known RBP	3.86	□□□□□ -1.79
LCB2	YDR062W	RPL2B	P0CX46	254 aa	Known RBP	3.86	□□□□□ -1.79
LCB2	YDR062W	GPI14	P47088	403 aa	Known RBP	3.86	□□□□□ -1.79
LCB2	YDR062W	LSM3	P57743	89 aa	Known RBP	3.86	□□□□□ -1.79
LCB2	YDR062W	YML122C	Q03207	126 aa		3.86	□□□□□ -1.79
LCB2	YDR062W	TMC1	Q08422	150 aa	Predicted RBP	3.86	□□□□□ -1.79
LCB2	YDR062W	CCH1	P50077	2039 aa		3.86	□□□□□ -1.79
LCB2	YDR062W	Q0255	P03881	472 aa		3.85	□□□□□ -1.79
LCB2	YDR062W	MAK31	P23059	88 aa		3.85	□□□□□ -1.79
LCB2	YDR062W	OCH1	P31755	480 aa		3.85	□□□□□ -1.79
LCB2	YDR062W	AVT2	P39981	480 aa		3.85	□□□□□ -1.79
LCB2	YDR062W	APQ12	P40532	138 aa		3.85	□□□□□ -1.79
LCB2	YDR062W	YFL012W	P43580	148 aa		3.85	□□□□□ -1.79
LCB2	YDR062W	RBL2	P48606	106 aa	Known RBP	3.85	□□□□□ -1.79
LCB2	YDR062W	TSA2	Q04120	196 aa		3.85	□□□□□ -1.79
LCB2	YDR062W	YTH1	Q06102	208 aa	Predicted RBP	3.85	□□□□□ -1.79
LCB2	YDR062W	SFK1	P35735	353 aa		3.84	□□□□□ -1.79
LCB2	YDR062W	VMA22	P38784	181 aa		3.84	□□□□□ -1.79
LCB2	YDR062W	YEA4	P40004	342 aa		3.84	□□□□□ -1.79
LCB2	YDR062W	YER188W	P40103	239 aa		3.84	□□□□□ -1.79
LCB2	YDR062W	SER2	P42941	309 aa		3.84	□□□□□ -1.79
LCB2	YDR062W	DGK1	Q12382	290 aa		3.84	□□□□□ -1.79
LCB2	YDR062W	RAD50	P12753	1312 aa		3.84	□□□□□ -1.8
LCB2	YDR062W	CDC8	P00572	216 aa		3.84	□□□□□ -1.8
LCB2	YDR062W	ATP15	P21306	62 aa		3.84	□□□□□ -1.8
LCB2	YDR062W	ECO1	P43605	281 aa		3.84	□□□□□ -1.8
LCB2	YDR062W	XPT1	P47165	209 aa		3.84	□□□□□ -1.8
LCB2	YDR062W	HHT1	P61830	136 aa		3.84	□□□□□ -1.8
LCB2	YDR062W	THI74	Q04083	370 aa		3.84	□□□□□ -1.8
LCB2	YDR062W	AKR2	Q12013	749 aa		3.84	□□□□□ -1.8
LCB2	YDR062W	DAS2	Q12084	232 aa		3.84	□□□□□ -1.8
LCB2	YDR062W	CCA1	P21269	546 aa		3.83	□□□□□ -1.8
LCB2	YDR062W	CSH1	P38287	376 aa		3.83	□□□□□ -1.8
LCB2	YDR062W	NSG1	P38837	291 aa		3.83	□□□□□ -1.8
LCB2	YDR062W	TVP23	P38962	199 aa		3.83	□□□□□ -1.8
LCB2	YDR062W	GON7	P46984	123 aa		3.83	□□□□□ -1.8
LCB2	YDR062W	SNX4	P47057	423 aa		3.83	□□□□□ -1.8
LCB2	YDR062W	YJR015W	P47090	510 aa		3.83	□□□□□ -1.8
LCB2	YDR062W	TTI2	P47168	421 aa		3.83	□□□□□ -1.8
LCB2	YDR062W	CSN9	Q03981	162 aa		3.83	□□□□□ -1.8
LCB2	YDR062W	YOL014W	Q08110	124 aa		3.83	□□□□□ -1.8
LCB2	YDR062W	YLR361C-A	Q3E795	98 aa		3.83	□□□□□ -1.8
LCB2	YDR062W	VMA11	P32842	164 aa		3.82	□□□□□ -1.8
LCB2	YDR062W	UTH1	P36135	365 aa		3.82	□□□□□ -1.8
LCB2	YDR062W	ORM1	P53224	222 aa		3.82	□□□□□ -1.8
LCB2	YDR062W	NKP2	Q06162	153 aa		3.82	□□□□□ -1.8
LCB2	YDR062W	RFU1	Q08003	200 aa		3.82	□□□□□ -1.8
LCB2	YDR062W	YML100W-A	Q8TGT0	57 aa		3.82	□□□□□ -1.8
LCB2	YDR062W	HIS3	P06633	220 aa		3.81	□□□□□ -1.8
LCB2	YDR062W	SEN2	P16658	377 aa		3.81	□□□□□ -1.8
LCB2	YDR062W	TKL2	P33315	681 aa		3.81	□□□□□ -1.8
LCB2	YDR062W	CIN5	P40917	295 aa		3.81	□□□□□ -1.8
LCB2	YDR062W	DSK2	P48510	373 aa		3.81	□□□□□ -1.8
LCB2	YDR062W	TOR2	P32600	2474 aa	Known RBP	3.81	□□□□□ -1.8
LCB2	YDR062W	TIM9	O74700	87 aa		3.81	□□□□□ -1.8
LCB2	YDR062W	RPL30	P14120	105 aa	Known RBP	3.81	□□□□□ -1.8
LCB2	YDR062W	PRE5	P40302	234 aa	Known RBP	3.81	□□□□□ -1.8
LCB2	YDR062W	YGR026W	P53217	278 aa		3.81	□□□□□ -1.8
LCB2	YDR062W	SPC24	Q04477	213 aa		3.81	□□□□□ -1.8
LCB2	YDR062W	YOR268C	Q08734	132 aa		3.81	□□□□□ -1.8
LCB2	YDR062W	YPR063C	Q12160	140 aa		3.81	□□□□□ -1.8
LCB2	YDR062W	SAS5	Q99314	248 aa		3.81	□□□□□ -1.8
LCB2	YDR062W	YHR032W-A	P0C5N6	59 aa		3.8	□□□□□ -1.8
LCB2	YDR062W	STP22	P25604	385 aa		3.8	□□□□□ -1.8
LCB2	YDR062W	CTR2	P38865	189 aa		3.8	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 90.3 ms