RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeastyeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE4YDL231C GLO1P50107 326 aa3.54□□□□□ -1.84
BRE4YDL231C RIB4P50861 169 aaPredicted RBP3.54□□□□□ -1.84
BRE4YDL231C SSU72P53538 206 aaPredicted RBP3.54□□□□□ -1.84
BRE4YDL231C FYV6P53913 173 aa3.54□□□□□ -1.84
BRE4YDL231C YBR255C-AQ3E776 120 aa3.54□□□□□ -1.84
BRE4YDL231C STF2P16965 84 aa3.53□□□□□ -1.84
BRE4YDL231C MRPL4P36517 319 aa3.53□□□□□ -1.84
BRE4YDL231C RPL13BP40212 199 aaKnown RBP3.53□□□□□ -1.84
BRE4YDL231C YNR071CP53757 342 aa3.53□□□□□ -1.84
BRE4YDL231C TMA23Q03525 211 aa3.53□□□□□ -1.84
BRE4YDL231C UPS1Q05776 175 aa3.53□□□□□ -1.84
BRE4YDL231C RPL13AQ12690 199 aaPredicted RBP3.53□□□□□ -1.84
BRE4YDL231C VMA9Q3E7B6 73 aa3.53□□□□□ -1.84
BRE4YDL231C RPB3P16370 318 aaKnown RBP3.53□□□□□ -1.84
BRE4YDL231C YIP5P53108 310 aa3.53□□□□□ -1.84
BRE4YDL231C CSI2Q08054 341 aa3.53□□□□□ -1.84
BRE4YDL231C YOL024WQ08172 172 aa3.53□□□□□ -1.84
BRE4YDL231C YOL029CQ08187 201 aa3.53□□□□□ -1.84
BRE4YDL231C YPL278CQ08990 100 aa3.53□□□□□ -1.84
BRE4YDL231C HTB1P02293 131 aaKnown RBP3.52□□□□□ -1.85
BRE4YDL231C PUT1P09368 476 aa3.52□□□□□ -1.85
BRE4YDL231C ATG8P38182 117 aaRIP-Chip data3.52□□□□□ -1.85not detected
BRE4YDL231C YBR096WP38256 230 aa3.52□□□□□ -1.85
BRE4YDL231C AME1P38313 324 aa3.52□□□□□ -1.85
BRE4YDL231C YPT31P38555 223 aaKnown RBP3.52□□□□□ -1.85
BRE4YDL231C SNU13P39990 126 aaKnown RBP3.52□□□□□ -1.85
BRE4YDL231C YER158CP40095 573 aa3.52□□□□□ -1.85
BRE4YDL231C YGL114WP53134 725 aa3.52□□□□□ -1.85
BRE4YDL231C GEP3Q08622 556 aa3.52□□□□□ -1.85
BRE4YDL231C Q0142Q9ZZW4 58 aa3.52□□□□□ -1.85
BRE4YDL231C YGL010WP25338 174 aa3.52□□□□□ -1.85
BRE4YDL231C IMD2P38697 523 aaKnown RBP3.52□□□□□ -1.85
BRE4YDL231C YIL163CP40448 117 aa3.52□□□□□ -1.85
BRE4YDL231C YFL015CP43578 164 aa3.52□□□□□ -1.85
BRE4YDL231C YAR1P46683 200 aa3.52□□□□□ -1.85
BRE4YDL231C GWT1P47026 490 aa3.52□□□□□ -1.85
BRE4YDL231C EST3Q03096 181 aa3.52□□□□□ -1.85
BRE4YDL231C LDS2Q08218 356 aa3.52□□□□□ -1.85
BRE4YDL231C NSA2P40078 261 aaKnown RBP3.52□□□□□ -1.85
BRE4YDL231C DFG10P40526 253 aa3.52□□□□□ -1.85
BRE4YDL231C ATG15P25641 520 aa3.51□□□□□ -1.85
BRE4YDL231C SEC72P39742 193 aaKnown RBP3.51□□□□□ -1.85
BRE4YDL231C ARP3P47117 449 aaKnown RBP3.51□□□□□ -1.85
BRE4YDL231C RSM10Q03201 203 aa3.51□□□□□ -1.85
BRE4YDL231C YMR082CQ04276 118 aa3.51□□□□□ -1.85
BRE4YDL231C YOR292CQ08743 309 aa3.51□□□□□ -1.85
BRE4YDL231C WIP1Q2V2P8 89 aa3.51□□□□□ -1.85
BRE4YDL231C ALK2P32789 676 aaPredicted RBP3.51□□□□□ -1.85
BRE4YDL231C YBR292CP38357 123 aa3.51□□□□□ -1.85
BRE4YDL231C IKI1P38874 309 aa3.51□□□□□ -1.85
BRE4YDL231C GPI16P38875 610 aa3.51□□□□□ -1.85
BRE4YDL231C LNP1P38878 278 aa3.51□□□□□ -1.85
BRE4YDL231C GAT2P40209 560 aa3.51□□□□□ -1.85
BRE4YDL231C ATG27P46989 271 aa3.51□□□□□ -1.85
BRE4YDL231C APJ1P53940 528 aa3.51□□□□□ -1.85
BRE4YDL231C IRC23Q08416 157 aa3.51□□□□□ -1.85
BRE4YDL231C CSM4Q08955 156 aa3.51□□□□□ -1.85
BRE4YDL231C YMR105W-AQ8TGS8 64 aa3.51□□□□□ -1.85
BRE4YDL231C ATP10P18496 279 aa3.51□□□□□ -1.85
BRE4YDL231C MLF3P32047 452 aa3.51□□□□□ -1.85
BRE4YDL231C NTF2P33331 125 aaKnown RBP3.51□□□□□ -1.85
BRE4YDL231C CPR5P35176 225 aa3.51□□□□□ -1.85
BRE4YDL231C YIP1P53039 248 aa3.51□□□□□ -1.85
BRE4YDL231C RRG8Q06109 277 aa3.51□□□□□ -1.85
BRE4YDL231C PRP11Q07350 266 aaPredicted RBP3.51□□□□□ -1.85
BRE4YDL231C RAD28Q12021 506 aa3.51□□□□□ -1.85
BRE4YDL231C ADH3P07246 375 aaKnown RBP3.5□□□□□ -1.85
BRE4YDL231C PAU1P0CE88 120 aa3.5□□□□□ -1.85
BRE4YDL231C PAU14P0CE89 120 aa3.5□□□□□ -1.85
BRE4YDL231C PAU6P0CE90 120 aa3.5□□□□□ -1.85
BRE4YDL231C PAU18P0CE91 120 aa3.5□□□□□ -1.85
BRE4YDL231C PAU8P0CE92 120 aa3.5□□□□□ -1.85
BRE4YDL231C PAU11P0CE93 120 aa3.5□□□□□ -1.85
BRE4YDL231C CNB1P25296 175 aa3.5□□□□□ -1.85
BRE4YDL231C TRS20P38334 175 aa3.5□□□□□ -1.85
BRE4YDL231C PAU13P38725 120 aa3.5□□□□□ -1.85
BRE4YDL231C PGD1P40356 397 aa3.5□□□□□ -1.85
BRE4YDL231C YGR017WP53210 297 aa3.5□□□□□ -1.85
BRE4YDL231C PAU10Q03050 120 aa3.5□□□□□ -1.85
BRE4YDL231C SEN15Q04675 128 aa3.5□□□□□ -1.85
BRE4YDL231C PAU20Q08322 120 aa3.5□□□□□ -1.85
BRE4YDL231C PRR2Q12310 699 aa3.5□□□□□ -1.85
BRE4YDL231C ATO3Q12359 275 aa3.5□□□□□ -1.85
BRE4YDL231C PAU9Q3E770 120 aa3.5□□□□□ -1.85
BRE4YDL231C YBR182C-AQ8TGU6 64 aa3.5□□□□□ -1.85
BRE4YDL231C YBR056W-AI2HB52 66 aa3.5□□□□□ -1.85
BRE4YDL231C ILV5P06168 395 aaKnown RBP3.5□□□□□ -1.85
BRE4YDL231C POF1P25576 258 aa3.5□□□□□ -1.85
BRE4YDL231C PEX4P29340 183 aa3.5□□□□□ -1.85
BRE4YDL231C CCS1P40202 249 aaKnown RBP3.5□□□□□ -1.85
BRE4YDL231C YJL163CP46996 555 aa3.5□□□□□ -1.85
BRE4YDL231C YIP3P53633 176 aa3.5□□□□□ -1.85
BRE4YDL231C SMM1P53720 384 aaKnown RBP3.5□□□□□ -1.85
BRE4YDL231C ARL3Q02804 198 aa3.5□□□□□ -1.85
BRE4YDL231C MCH1Q07376 486 aa3.5□□□□□ -1.85
BRE4YDL231C YPR145C-AQ2V2P0 78 aa3.5□□□□□ -1.85
BRE4YDL231C ROX3P25046 220 aa3.49□□□□□ -1.85
BRE4YDL231C CBT1P36038 271 aaPredicted RBP3.49□□□□□ -1.85
BRE4YDL231C YHL044WP38727 235 aa3.49□□□□□ -1.85
BRE4YDL231C LSM4P40070 187 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms