RNA–Protein interactions for RNA: YDL146W

LDB17, Transcript of Protein involved in the regulation of endocytosis, yeastyeast

Gene LDB17, Length 1,476 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB17YDL146W SPC3Q12133 184 aa3.59□□□□□ -1.84
LDB17YDL146W YLR099W-AQ3E798 87 aa3.59□□□□□ -1.84
LDB17YDL146W CPA1P07258 411 aaKnown RBP3.58□□□□□ -1.84
LDB17YDL146W YCR101CP25607 182 aa3.58□□□□□ -1.84
LDB17YDL146W SPT14P32363 452 aa3.58□□□□□ -1.84
LDB17YDL146W MRPS16Q02608 121 aa3.58□□□□□ -1.84
LDB17YDL146W YMR099CQ03161 297 aaKnown RBP3.58□□□□□ -1.84
LDB17YDL146W FYV7Q12247 151 aa3.58□□□□□ -1.84
LDB17YDL146W IES3Q12345 250 aa3.58□□□□□ -1.84
LDB17YDL146W YNL277W-AQ3E7Z0 62 aa3.58□□□□□ -1.84
LDB17YDL146W YAR023CD6VPM8 179 aa3.57□□□□□ -1.84
LDB17YDL146W RAD10P06838 210 aa3.57□□□□□ -1.84
LDB17YDL146W NMT1P14743 455 aa3.57□□□□□ -1.84
LDB17YDL146W YDR274CP87283 123 aa3.57□□□□□ -1.84
LDB17YDL146W SMD1Q02260 146 aaPredicted RBP3.57□□□□□ -1.84
LDB17YDL146W FCF1Q05498 189 aaPredicted RBP3.57□□□□□ -1.84
LDB17YDL146W ODC2Q99297 307 aa3.57□□□□□ -1.84
LDB17YDL146W AUS1Q08409 1394 aa3.57□□□□□ -1.84
LDB17YDL146W SHB17P36136 271 aaKnown RBP3.56□□□□□ -1.84
LDB17YDL146W MRPL17P36528 281 aa3.56□□□□□ -1.84
LDB17YDL146W FYV4P38783 130 aaPredicted RBP3.56□□□□□ -1.84
LDB17YDL146W YDR391CQ04170 232 aa3.56□□□□□ -1.84
LDB17YDL146W YPR114WQ06107 315 aa3.56□□□□□ -1.84
LDB17YDL146W MCH1Q07376 486 aa3.56□□□□□ -1.84
LDB17YDL146W BOL1Q3E793 110 aa3.56□□□□□ -1.84
LDB17YDL146W HYM1P32464 399 aa3.55□□□□□ -1.84
LDB17YDL146W SNC2P33328 115 aa3.55□□□□□ -1.84
LDB17YDL146W YBR220CP38318 560 aa3.55□□□□□ -1.84
LDB17YDL146W TRS20P38334 175 aa3.55□□□□□ -1.84
LDB17YDL146W HTD2P38790 280 aaKnown RBP3.55□□□□□ -1.84
LDB17YDL146W YHR140WP38842 239 aa3.55□□□□□ -1.84
LDB17YDL146W YER188WP40103 239 aa3.55□□□□□ -1.84
LDB17YDL146W GVP36P40531 326 aaKnown RBP3.55□□□□□ -1.84
LDB17YDL146W YJL218WP40892 196 aaKnown RBP3.55□□□□□ -1.84
LDB17YDL146W YGR017WP53210 297 aa3.55□□□□□ -1.84
LDB17YDL146W YNL033WP53964 284 aa3.55□□□□□ -1.84
LDB17YDL146W YNL019CP53975 284 aa3.55□□□□□ -1.84
LDB17YDL146W NSP1P14907 823 aaKnown RBP3.54□□□□□ -1.84
LDB17YDL146W LHP1P33399 275 aaKnown RBP3.54□□□□□ -1.84
LDB17YDL146W ECO1P43605 281 aa3.54□□□□□ -1.84
LDB17YDL146W AIF1P52923 378 aa3.54□□□□□ -1.84
LDB17YDL146W AIM11P87275 137 aa3.54□□□□□ -1.84
LDB17YDL146W FYV12Q08559 129 aa3.54□□□□□ -1.84
LDB17YDL146W YLR118CQ12354 227 aa3.54□□□□□ -1.84
LDB17YDL146W SUI1P32911 108 aaKnown RBP3.54□□□□□ -1.84
LDB17YDL146W UMP1P38293 148 aa3.54□□□□□ -1.84
LDB17YDL146W NSA2P40078 261 aaKnown RBP3.54□□□□□ -1.84
LDB17YDL146W SFT1P43682 97 aa3.54□□□□□ -1.84
LDB17YDL146W GON7P46984 123 aa3.54□□□□□ -1.84
LDB17YDL146W SBH1P52870 82 aa3.54□□□□□ -1.84
LDB17YDL146W YGR026WP53217 278 aa3.54□□□□□ -1.84
LDB17YDL146W VPS28Q02767 242 aa3.54□□□□□ -1.84
LDB17YDL146W AIM36Q03798 255 aa3.54□□□□□ -1.84
LDB17YDL146W MRPS8Q03799 155 aa3.54□□□□□ -1.84
LDB17YDL146W GAL83Q04739 417 aa3.54□□□□□ -1.84
LDB17YDL146W ATO3Q12359 275 aa3.54□□□□□ -1.84
LDB17YDL146W PHO13P19881 312 aa3.53□□□□□ -1.84
LDB17YDL146W YRA2P36036 203 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
LDB17YDL146W YFR045WP43617 309 aa3.53□□□□□ -1.84
LDB17YDL146W SAE3P89114 91 aa3.53□□□□□ -1.84
LDB17YDL146W YKR005CQ02203 525 aa3.53□□□□□ -1.84
LDB17YDL146W CWC27Q02770 301 aa3.53□□□□□ -1.84
LDB17YDL146W YMR253CQ04835 414 aa3.53□□□□□ -1.84
LDB17YDL146W SAS5Q99314 248 aa3.53□□□□□ -1.84
LDB17YDL146W RAD6P06104 172 aa3.52□□□□□ -1.85
LDB17YDL146W RPS19AP07280 144 aaKnown RBP3.52□□□□□ -1.85
LDB17YDL146W RPS19BP07281 144 aaPredicted RBP3.52□□□□□ -1.85
LDB17YDL146W YHR032W-AP0C5N6 59 aa3.52□□□□□ -1.85
LDB17YDL146W YHL026CP38740 315 aa3.52□□□□□ -1.85
LDB17YDL146W BUD25P85052 153 aa3.52□□□□□ -1.85
LDB17YDL146W TMA23Q03525 211 aa3.52□□□□□ -1.85
LDB17YDL146W POR1P04840 283 aaKnown RBP3.51□□□□□ -1.85
LDB17YDL146W DDI2P0CH63 225 aa3.51□□□□□ -1.85
LDB17YDL146W DDI3P0CH64 225 aa3.51□□□□□ -1.85
LDB17YDL146W HSP12P22943 109 aaKnown RBP3.51□□□□□ -1.85
LDB17YDL146W PCL1P24867 279 aa3.51□□□□□ -1.85
LDB17YDL146W BUD23P25627 275 aaPredicted RBP3.51□□□□□ -1.85
LDB17YDL146W AHT1P29589 182 aa3.51□□□□□ -1.85
LDB17YDL146W YBL010CP32788 280 aa3.51□□□□□ -1.85
LDB17YDL146W CTR2P38865 189 aa3.51□□□□□ -1.85
LDB17YDL146W EST3Q03096 181 aa3.51□□□□□ -1.85
LDB17YDL146W SYM1Q06563 197 aa3.51□□□□□ -1.85
LDB17YDL146W TRM3Q07527 1436 aa3.5□□□□□ -1.85
LDB17YDL146W HIS3P06633 220 aa3.5□□□□□ -1.85
LDB17YDL146W RPL14AP36105 138 aaKnown RBP3.5□□□□□ -1.85
LDB17YDL146W YKR070WP36151 352 aaKnown RBP3.5□□□□□ -1.85
LDB17YDL146W RPL14BP38754 138 aaKnown RBP3.5□□□□□ -1.85
LDB17YDL146W YEL028WP39989 153 aa3.5□□□□□ -1.85
LDB17YDL146W ATP20Q12233 115 aa3.5□□□□□ -1.85
LDB17YDL146W ADK1P07170 222 aaKnown RBP3.49□□□□□ -1.85
LDB17YDL146W SPC25P40014 221 aa3.49□□□□□ -1.85
LDB17YDL146W CUP9P41817 306 aa3.49□□□□□ -1.85
LDB17YDL146W YMR295CQ03559 197 aa3.49□□□□□ -1.85
LDB17YDL146W FSF1Q12029 327 aaKnown RBP3.49□□□□□ -1.85
LDB17YDL146W FCF2Q12035 217 aaPredicted RBP3.49□□□□□ -1.85
LDB17YDL146W MSW1P04803 379 aa3.48□□□□□ -1.85
LDB17YDL146W YEL045CP32616 141 aa3.48□□□□□ -1.85
LDB17YDL146W YKR032WP36127 104 aa3.48□□□□□ -1.85
LDB17YDL146W SMD3P43321 101 aaKnown RBP3.48□□□□□ -1.85
LDB17YDL146W RPS12P48589 143 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms