RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C COA4Q05809 96 aa2.31□□□□□ -2.04
RPN4YDL020C MOT1P32333 1867 aa2.31□□□□□ -2.04
RPN4YDL020C RAS2P01120 322 aaKnown RBP2.3□□□□□ -2.04
RPN4YDL020C SEC4P07560 215 aaKnown RBP2.3□□□□□ -2.04
RPN4YDL020C YCR087C-AP37263 153 aa2.3□□□□□ -2.04
RPN4YDL020C ERV15P38312 142 aa2.3□□□□□ -2.04
RPN4YDL020C CYC2P38909 366 aa2.3□□□□□ -2.04
RPN4YDL020C AIF1P52923 378 aa2.3□□□□□ -2.04
RPN4YDL020C EFM5P53200 248 aaKnown RBP2.3□□□□□ -2.04
RPN4YDL020C YNL033WP53964 284 aa2.3□□□□□ -2.04
RPN4YDL020C YNL019CP53975 284 aa2.3□□□□□ -2.04
RPN4YDL020C MRPS17Q03246 237 aaPredicted RBP2.3□□□□□ -2.04
RPN4YDL020C YMR030W-AQ3E760 96 aa2.3□□□□□ -2.04
RPN4YDL020C MED11Q99278 115 aa2.3□□□□□ -2.04
RPN4YDL020C PTC1P35182 281 aa2.29□□□□□ -2.04
RPN4YDL020C MRPL28P36527 147 aa2.29□□□□□ -2.04
RPN4YDL020C YBR242WP38331 238 aa2.29□□□□□ -2.04
RPN4YDL020C AIM18P38884 321 aa2.29□□□□□ -2.04
RPN4YDL020C RMD6P39975 231 aa2.29□□□□□ -2.04
RPN4YDL020C AVT2P39981 480 aa2.29□□□□□ -2.04
RPN4YDL020C ARO8P53090 500 aaKnown RBP2.29□□□□□ -2.04
RPN4YDL020C PET191Q02772 108 aa2.29□□□□□ -2.04
RPN4YDL020C SPG3Q04398 127 aaPredicted RBP2.29□□□□□ -2.04
RPN4YDL020C YHR214C-EQ8TGK0 99 aa2.29□□□□□ -2.04
RPN4YDL020C UBR2Q07963 1872 aa2.28□□□□□ -2.04
RPN4YDL020C CDC7P06243 507 aa2.28□□□□□ -2.04
RPN4YDL020C NMT1P14743 455 aa2.28□□□□□ -2.04
RPN4YDL020C UTP30P36144 274 aaKnown RBP2.28□□□□□ -2.04
RPN4YDL020C HMF1P40037 129 aaKnown RBP2.28□□□□□ -2.04
RPN4YDL020C BMT5P40493 336 aa2.28□□□□□ -2.04
RPN4YDL020C YKE4P40544 346 aa2.28□□□□□ -2.04
RPN4YDL020C COG5P53951 403 aa2.28□□□□□ -2.04
RPN4YDL020C YCR090CP25654 182 aaKnown RBP2.27□□□□□ -2.05
RPN4YDL020C SEC17P32602 292 aa2.27□□□□□ -2.05
RPN4YDL020C FMP23P38231 175 aa2.27□□□□□ -2.05
RPN4YDL020C PGD1P40356 397 aa2.27□□□□□ -2.05
RPN4YDL020C YGR050CP53231 118 aa2.27□□□□□ -2.05
RPN4YDL020C YNR062CP53748 327 aa2.27□□□□□ -2.05
RPN4YDL020C LSM3P57743 89 aaKnown RBP2.27□□□□□ -2.05
RPN4YDL020C DML1Q03652 475 aa2.27□□□□□ -2.05
RPN4YDL020C CSN9Q03981 162 aa2.27□□□□□ -2.05
RPN4YDL020C HPT1Q04178 221 aaKnown RBP2.27□□□□□ -2.05
RPN4YDL020C USB1Q12208 290 aaKnown RBP2.27□□□□□ -2.05
RPN4YDL020C YCL012CQ8J0M4 134 aa2.27□□□□□ -2.05
RPN4YDL020C LAA1P39526 2014 aa2.27□□□□□ -2.05
RPN4YDL020C SEN2P16658 377 aa2.27□□□□□ -2.05
RPN4YDL020C BUB2P26448 306 aaPredicted RBP2.27□□□□□ -2.05
RPN4YDL020C UBC8P28263 218 aa2.27□□□□□ -2.05
RPN4YDL020C SPT14P32363 452 aa2.27□□□□□ -2.05
RPN4YDL020C PTM1P32857 523 aa2.27□□□□□ -2.05
RPN4YDL020C TVP38P36164 337 aa2.27□□□□□ -2.05
RPN4YDL020C MAK5P38112 773 aaPredicted RBP2.27□□□□□ -2.05
RPN4YDL020C IPT1P38954 527 aa2.27□□□□□ -2.05
RPN4YDL020C MTW1P39731 289 aa2.27□□□□□ -2.05
RPN4YDL020C DIE2P50076 525 aa2.27□□□□□ -2.05
RPN4YDL020C ERG25P53045 309 aa2.27□□□□□ -2.05
RPN4YDL020C LSM7P53905 115 aaKnown RBP2.27□□□□□ -2.05
RPN4YDL020C GPI11Q06636 219 aa2.27□□□□□ -2.05
RPN4YDL020C BRX1Q08235 291 aaKnown RBP2.27□□□□□ -2.05
RPN4YDL020C MHF1Q3E835 90 aa2.27□□□□□ -2.05
RPN4YDL020C RIB3Q99258 208 aa2.27□□□□□ -2.05
RPN4YDL020C PET9P18239 318 aaKnown RBP2.26□□□□□ -2.05
RPN4YDL020C YHR022CP38763 256 aa2.26□□□□□ -2.05
RPN4YDL020C VMA7P39111 118 aa2.26□□□□□ -2.05
RPN4YDL020C RPL33BP41056 107 aaKnown RBP2.26□□□□□ -2.05
RPN4YDL020C CYT2Q00873 224 aa2.26□□□□□ -2.05
RPN4YDL020C MZM1Q03429 123 aaPredicted RBP2.26□□□□□ -2.05
RPN4YDL020C YPL162CQ12042 273 aa2.26□□□□□ -2.05
RPN4YDL020C MCP1Q12106 302 aa2.26□□□□□ -2.05
RPN4YDL020C MDM32Q12171 622 aa2.26□□□□□ -2.05
RPN4YDL020C RTR2Q12378 196 aa2.26□□□□□ -2.05
RPN4YDL020C GTT2Q12390 233 aa2.26□□□□□ -2.05
RPN4YDL020C EFG1Q3E705 233 aaKnown RBP2.26□□□□□ -2.05
RPN4YDL020C YKL018C-AQ3E7A7 99 aa2.26□□□□□ -2.05
RPN4YDL020C RPL25P04456 142 aaKnown RBP2.25□□□□□ -2.05
RPN4YDL020C NSP1P14907 823 aaKnown RBP2.25□□□□□ -2.05
RPN4YDL020C CAF4P36130 643 aa2.25□□□□□ -2.05
RPN4YDL020C MRPL17P36528 281 aa2.25□□□□□ -2.05
RPN4YDL020C IPI1P38803 334 aaPredicted RBP2.25□□□□□ -2.05
RPN4YDL020C YER137CP40083 148 aaKnown RBP2.25□□□□□ -2.05
RPN4YDL020C ICE2P40499 491 aa2.25□□□□□ -2.05
RPN4YDL020C ALB1P47019 175 aaPredicted RBP2.25□□□□□ -2.05
RPN4YDL020C GIM3P53900 129 aa2.25□□□□□ -2.05
RPN4YDL020C GRX8Q05926 109 aa2.25□□□□□ -2.05
RPN4YDL020C YLR031WQ07978 186 aa2.25□□□□□ -2.05
RPN4YDL020C GPM2Q12008 311 aa2.25□□□□□ -2.05
RPN4YDL020C PST2Q12335 198 aaKnown RBP2.25□□□□□ -2.05
RPN4YDL020C TSC3Q3E790 80 aa2.25□□□□□ -2.05
RPN4YDL020C BOL1Q3E793 110 aa2.25□□□□□ -2.05
RPN4YDL020C SER2P42941 309 aa2.24□□□□□ -2.05
RPN4YDL020C NQM1P53228 333 aaPredicted RBP2.24□□□□□ -2.05
RPN4YDL020C NUP49Q02199 472 aa2.24□□□□□ -2.05
RPN4YDL020C NHP10Q03435 203 aa2.24□□□□□ -2.05
RPN4YDL020C YNG1Q08465 219 aa2.24□□□□□ -2.05
RPN4YDL020C YOR214CQ12282 236 aa2.24□□□□□ -2.05
RPN4YDL020C MHF2Q3E829 80 aa2.24□□□□□ -2.05
RPN4YDL020C TIM9O74700 87 aa2.23□□□□□ -2.05
RPN4YDL020C QCR7P00128 127 aa2.23□□□□□ -2.05
RPN4YDL020C ARO7P32178 256 aa2.23□□□□□ -2.05
RPN4YDL020C RPS1AP33442 255 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 70.4 ms