RNA–Protein interactions for RNA: YAL021C

CCR4, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CCR4, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCR4YAL021C YMR087WQ04299 284 aa6.35□□□□□ -1.39
CCR4YAL021C YDL057WQ07379 328 aa6.35□□□□□ -1.39
CCR4YAL021C DGA1Q08650 418 aa6.35□□□□□ -1.39
CCR4YAL021C YDR029WQ12111 104 aa6.35□□□□□ -1.39
CCR4YAL021C PRE2P30656 287 aaKnown RBP6.34□□□□□ -1.39
CCR4YAL021C YPS1P32329 569 aa6.34□□□□□ -1.39
CCR4YAL021C AIM11P87275 137 aa6.34□□□□□ -1.39
CCR4YAL021C POR1P04840 283 aaKnown RBP6.34□□□□□ -1.39
CCR4YAL021C YEL076C-AP0CX16 216 aa6.34□□□□□ -1.39
CCR4YAL021C YLR464WP0CX17 216 aa6.34□□□□□ -1.39
CCR4YAL021C MSI1P13712 422 aa6.34□□□□□ -1.39
CCR4YAL021C PDE1P22434 369 aa6.34□□□□□ -1.39
CCR4YAL021C PAU16P35994 123 aa6.34□□□□□ -1.39
CCR4YAL021C YEL076CP39971 216 aa6.34□□□□□ -1.39
CCR4YAL021C GLE2P40066 365 aa6.34□□□□□ -1.39
CCR4YAL021C MMS2P53152 137 aa6.34□□□□□ -1.39
CCR4YAL021C YGR219WP53307 113 aa6.34□□□□□ -1.39
CCR4YAL021C YMR166CQ03829 368 aa6.34□□□□□ -1.39
CCR4YAL021C YBR063CP38083 404 aa6.33□□□□□ -1.4
CCR4YAL021C YJL213WP40896 331 aa6.33□□□□□ -1.4
CCR4YAL021C OST2P46964 130 aa6.33□□□□□ -1.4
CCR4YAL021C YLR152CP54072 576 aa6.33□□□□□ -1.4
CCR4YAL021C SRP21P32342 167 aa6.33□□□□□ -1.4
CCR4YAL021C MPM1P40364 252 aa6.33□□□□□ -1.4
CCR4YAL021C YGL262WP53054 175 aa6.33□□□□□ -1.4
CCR4YAL021C SCS22Q6Q595 175 aa6.33□□□□□ -1.4
CCR4YAL021C MRPS5P33759 307 aa6.32□□□□□ -1.4
CCR4YAL021C YER134CP40081 178 aa6.32□□□□□ -1.4
CCR4YAL021C GON7P46984 123 aa6.32□□□□□ -1.4
CCR4YAL021C IZH2Q12442 317 aa6.32□□□□□ -1.4
CCR4YAL021C YOR338WQ99326 363 aa6.32□□□□□ -1.4
CCR4YAL021C YAR066WP0CX18 203 aa6.32□□□□□ -1.4
CCR4YAL021C YHR214WP0CX19 203 aa6.32□□□□□ -1.4
CCR4YAL021C RPB8P20436 146 aa6.32□□□□□ -1.4
CCR4YAL021C LYS1P38998 373 aaRIP-Chip data6.32□□□□□ -1.4not detected
CCR4YAL021C PUS2P53167 370 aa6.32□□□□□ -1.4
CCR4YAL021C TAM41P53230 385 aa6.32□□□□□ -1.4
CCR4YAL021C YDL218WQ07629 317 aa6.32□□□□□ -1.4
CCR4YAL021C ENB1Q08299 606 aa6.32□□□□□ -1.4
CCR4YAL021C YLR363W-AQ3E747 85 aa6.32□□□□□ -1.4
CCR4YAL021C CHO1P08456 276 aa6.31□□□□□ -1.4
CCR4YAL021C VMA3P25515 160 aa6.31□□□□□ -1.4
CCR4YAL021C UMP1P38293 148 aa6.31□□□□□ -1.4
CCR4YAL021C YFR045WP43617 309 aa6.31□□□□□ -1.4
CCR4YAL021C ARP3P47117 449 aaKnown RBP6.31□□□□□ -1.4
CCR4YAL021C LSM3P57743 89 aaKnown RBP6.31□□□□□ -1.4
CCR4YAL021C COF1Q03048 143 aaKnown RBP6.31□□□□□ -1.4
CCR4YAL021C FIT3Q08907 204 aa6.31□□□□□ -1.4
CCR4YAL021C YPL247CQ12523 523 aa6.31□□□□□ -1.4
CCR4YAL021C SOD2P00447 233 aa6.31□□□□□ -1.4
CCR4YAL021C HSP10P38910 106 aa6.31□□□□□ -1.4
CCR4YAL021C YPR098CQ06089 161 aa6.31□□□□□ -1.4
CCR4YAL021C MCA1Q08601 432 aa6.31□□□□□ -1.4
CCR4YAL021C YIL102C-AQ2V2P5 75 aa6.31□□□□□ -1.4
CCR4YAL021C ATG40Q99325 256 aa6.31□□□□□ -1.4
CCR4YAL021C PRO1P32264 428 aa6.3□□□□□ -1.4
CCR4YAL021C SFT1P43682 97 aa6.3□□□□□ -1.4
CCR4YAL021C CAB4P53332 305 aa6.3□□□□□ -1.4
CCR4YAL021C RRT7Q07829 113 aa6.3□□□□□ -1.4
CCR4YAL021C YPL162CQ12042 273 aa6.3□□□□□ -1.4
CCR4YAL021C YIH1P25637 258 aa6.3□□□□□ -1.4
CCR4YAL021C ERG24P32462 438 aaKnown RBP6.3□□□□□ -1.4
CCR4YAL021C PHS1P40857 217 aa6.3□□□□□ -1.4
CCR4YAL021C RPN11P43588 306 aaKnown RBP6.3□□□□□ -1.4
CCR4YAL021C SCD6P45978 349 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4 RIP-Chip
CCR4YAL021C EMC4P53073 190 aa6.3□□□□□ -1.4
CCR4YAL021C SNT309Q06091 175 aaPredicted RBP6.3□□□□□ -1.4
CCR4YAL021C MTR3P48240 250 aaPredicted RBP6.29□□□□□ -1.4
CCR4YAL021C NAT3Q06504 195 aa6.29□□□□□ -1.4
CCR4YAL021C RIM15P43565 1770 aa6.29□□□□□ -1.4
CCR4YAL021C SEC11P15367 167 aa6.29□□□□□ -1.4
CCR4YAL021C TOM40P23644 387 aaKnown RBP6.29□□□□□ -1.4
CCR4YAL021C CNE1P27825 502 aa6.29□□□□□ -1.4
CCR4YAL021C PTH1P38876 190 aaKnown RBP6.29□□□□□ -1.4
CCR4YAL021C YER079WP40052 210 aaKnown RBP6.29□□□□□ -1.4
CCR4YAL021C SUN4P53616 420 aa6.29□□□□□ -1.4
CCR4YAL021C YMR103CQ04436 120 aa6.29□□□□□ -1.4
CCR4YAL021C UPS1Q05776 175 aa6.29□□□□□ -1.4
CCR4YAL021C ATO3Q12359 275 aa6.29□□□□□ -1.4
CCR4YAL021C FMP49A0A023PZB3 126 aa6.28□□□□□ -1.4
CCR4YAL021C MRS1P07266 363 aa6.28□□□□□ -1.4
CCR4YAL021C URA5P13298 226 aaKnown RBP6.28□□□□□ -1.4
CCR4YAL021C IES6P32617 166 aa6.28□□□□□ -1.4
CCR4YAL021C FMP46P36141 133 aaKnown RBP6.28□□□□□ -1.4
CCR4YAL021C UTP15Q04305 513 aaKnown RBP6.28□□□□□ -1.4
CCR4YAL021C ECM12O13529 151 aa6.28□□□□□ -1.4
CCR4YAL021C ILV1P00927 576 aaKnown RBP6.28□□□□□ -1.4
CCR4YAL021C RAD6P06104 172 aa6.28□□□□□ -1.4
CCR4YAL021C RPS2P25443 254 aaKnown RBP6.28□□□□□ -1.4
CCR4YAL021C SGN1P40561 250 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
CCR4YAL021C KNH1P50112 268 aa6.28□□□□□ -1.4
CCR4YAL021C EMI1Q04406 187 aa6.28□□□□□ -1.4
CCR4YAL021C YOR015WQ12169 119 aa6.28□□□□□ -1.4
CCR4YAL021C YLR149CQ99296 730 aa6.28□□□□□ -1.4
CCR4YAL021C RPS10BP46784 105 aaKnown RBP6.27□□□□□ -1.41
CCR4YAL021C TAD3Q9URQ3 322 aa6.27□□□□□ -1.41
CCR4YAL021C YJL193WP39542 402 aa6.27□□□□□ -1.41
CCR4YAL021C CYB5P40312 120 aa6.27□□□□□ -1.41
CCR4YAL021C EGT2P42835 1041 aa6.27□□□□□ -1.41
CCR4YAL021C GEP7P53171 287 aa6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms