RNA–Protein interactions for RNA: ENST00000613023.1

RNVU1-19-201, Transcript of RNA, variant U1 small nuclear 19, humanhuman

BASIC

Gene RNVU1-19, Length 167 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-19-201ENST00000613023 NXF1Q9UBU9 619 aaKnown RBP8.48□□□□□ -1.05
RNVU1-19-201ENST00000613023 DNAJB4Q9UDY4 337 aa8.48□□□□□ -1.05
RNVU1-19-201ENST00000613023 PCDHGC3Q9UN70 934 aa8.48□□□□□ -1.05
RNVU1-19-201ENST00000613023 L1RE1Q9UN81 338 aa8.48□□□□□ -1.05
RNVU1-19-201ENST00000613023 STXBP5LQ9Y2K9 1186 aa8.48□□□□□ -1.05
RNVU1-19-201ENST00000613023 PCDHA11Q9Y5I1 949 aa8.48□□□□□ -1.05
RNVU1-19-201ENST00000613023 OR6C75A6NL08 312 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 RBAK-RBAKDNI3L0D1 243 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 ARHGAP6O43182 974 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 MED7O43513 233 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 TLL1O43897 1013 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 TADA2AO75478 443 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 UPP2O95045 317 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 LCA5LO95447 670 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 LSM8O95777 96 aaKnown RBP8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 VDRP11473 427 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 CDH5P33151 784 aaPredicted RBP8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 CLCN1P35523 988 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 OR1G1P47890 313 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 GATMP50440 423 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 PDE6CP51160 858 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 RAD23BP54727 409 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 ADKP55263 362 aaKnown RBP8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 CCZ1BP86790 482 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 CCZ1P86791 482 aaPredicted RBP8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 APBA1Q02410 837 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 CREMQ03060 361 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 LRMPQ12912 555 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 MAPRE1Q15691 268 aaKnown RBP8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 ARHGAP44Q17R89 818 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 ASTE1Q2TB18 679 aaPredicted RBP8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 C10orf76Q5T2E6 689 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 E4F1Q66K89 784 aaPredicted RBP8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 SCARA3Q6AZY7 606 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 FUT10Q6P4F1 479 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 GJB7Q6PEY0 223 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 DSTYKQ6XUX3 929 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 ANKS3Q6ZW76 656 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 DDX53Q86TM3 631 aaKnown RBP8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 VPS36Q86VN1 386 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 METTL23Q86XA0 190 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 RBBP8NLQ8NC74 664 aaPredicted RBP8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 WHAMMQ8TF30 809 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 DDX1Q92499 740 aaKnown RBP8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 KAT5Q92993 513 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 TMEM176AQ96HP8 235 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 RNPC3Q96LT9 517 aaKnown RBP8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 CEP295NLQ96MC4 621 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 BAG1Q99933 345 aaPredicted RBP8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 HERC2P3Q9BVR0 1158 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 ZNF518BQ9C0D4 1074 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 SDCBP2Q9H190 292 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 CHST7Q9NS84 486 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 SPG21Q9NZD8 308 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 NOCTQ9UK39 431 aaKnown RBP8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 CDH9Q9ULB4 789 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 MAFFQ9ULX9 164 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 POLIQ9UNA4 740 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 SSX2IPQ9Y2D8 614 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 PCDHB4Q9Y5E5 795 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 PCDHB12Q9Y5F1 795 aa8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 MRPL42Q9Y6G3 142 aaKnown RBP8.47□□□□□ -1.05
RNVU1-19-201ENST00000613023 MTCL1Q9Y4B5 1905 aaKnown RBP8.46□□□□□ -1.05
RNVU1-19-201ENST00000613023 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 H7C4K7 107 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 TBC1D4O60343 1298 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 SOD2P04179 222 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 PTMAP06454 111 aaKnown RBP8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 GZMAP12544 262 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 CYP11B1P15538 503 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 CYLC1P35663 651 aaPredicted RBP8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 GNL1P36915 607 aaPredicted RBP8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 CDR2Q01850 454 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 YWHAHQ04917 246 aaPredicted RBP8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 KLHL30Q0D2K2 578 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 SHHQ15465 462 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 RAB30Q15771 203 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 CNGA2Q16280 664 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 SLC18A3Q16572 532 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 PTPN21Q16825 1174 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 USP41Q3LFD5 358 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 PAN2Q504Q3 1202 aaKnown RBP8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 WSCD1Q658N2 575 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 PDE12Q6L8Q7 609 aaKnown RBP8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 FAM171BQ6P995 826 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 TMEM270Q6UE05 265 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 ZNF662Q6ZS27 426 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 THEM5Q8N1Q8 247 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 SLC4A11Q8NBS3 891 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 B3GALNT2Q8NCR0 500 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 SLC30A5Q8TAD4 765 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 OLIG1Q8TAK6 271 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 C2orf15Q8WU43 125 aaKnown RBP8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 CPLX3Q8WVH0 158 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 PIK3R5Q8WYR1 880 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 TMEM169Q96HH4 297 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 FUBP3Q96I24 572 aaKnown RBP eCLIP8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 MMS19Q96T76 1030 aa8.46□□□□□ -1.06
RNVU1-19-201ENST00000613023 PKMYT1Q99640 499 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms