RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 FAM214BQ7L5A3 538 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 OTOP3Q7RTS5 596 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 ERMP1Q7Z2K6 904 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 CABP7Q86V35 215 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 VPS52Q8N1B4 723 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 SLC39A11Q8N1S5 342 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 VN1R2Q8NFZ6 395 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 ASB11Q8WXH4 323 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 PGBD4Q96DM1 585 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 PGBD1Q96JS3 809 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 FAM193BQ96PV7 902 aaPredicted RBP6.24□□□□□ -1.41
DNMT1-220ENST00000589351 JPH2Q9BR39 696 aaPredicted RBP6.24□□□□□ -1.41
DNMT1-220ENST00000589351 EMILIN2Q9BXX0 1053 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 SEMA4AQ9H3S1 761 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 POMKQ9H5K3 350 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 ZSWIM4Q9H7M6 989 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 CAPN10Q9HC96 672 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 ANO2Q9NQ90 1003 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 NAP1L2Q9ULW6 460 aaPredicted RBP6.24□□□□□ -1.41
DNMT1-220ENST00000589351 SSX2IPQ9Y2D8 614 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 COL4A3BPQ9Y5P4 624 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 HCFC2Q9Y5Z7 792 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 IRAK3Q9Y616 596 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 TAF6LQ9Y6J9 622 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 ATG2AQ2TAZ0 1938 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 KIAA1671Q9BY89 1806 aa6.24□□□□□ -1.41
DNMT1-220ENST00000589351 EVPLQ92817 2033 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.23□□□□□ -1.41
DNMT1-220ENST00000589351 GOLGA8AA7E2F4 631 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 GOLGA8BA8MQT2 603 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 C2CD4DB7Z1M9 353 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 FAM86B1E9PN63 330 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 CLASP2O75122 1294 aaKnown RBP6.23□□□□□ -1.41
DNMT1-220ENST00000589351 ZC3H11AO75152 810 aaKnown RBP eCLIP6.23□□□□□ -1.41
DNMT1-220ENST00000589351 ALDH2P05091 517 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 FAM86B2P0C5J1 330 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 SFPQP23246 707 aaKnown RBP eCLIP6.23□□□□□ -1.41
DNMT1-220ENST00000589351 KLRC2P26717 231 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 ID4P47928 161 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 METAP2P50579 478 aaKnown RBP eCLIP6.23□□□□□ -1.41
DNMT1-220ENST00000589351 RAB27AP51159 221 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 CLCN3P51790 818 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 RCAN1P53805 252 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 BCAR1P56945 870 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 TDGQ13569 410 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 KIAA0319Q5VV43 1072 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 TWF2Q6IBS0 349 aaKnown RBP6.23□□□□□ -1.41
DNMT1-220ENST00000589351 KIAA1841Q6NSI8 718 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 LRRC55Q6ZSA7 311 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 CCDC149Q6ZUS6 474 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 DDX53Q86TM3 631 aaKnown RBP6.23□□□□□ -1.41
DNMT1-220ENST00000589351 RAB11FIP4Q86YS3 637 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 REXO1Q8N1G1 1221 aaKnown RBP6.23□□□□□ -1.41
DNMT1-220ENST00000589351 LRRC71Q8N4P6 559 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 URGCPQ8TCY9 931 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 STAMQ92783 540 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 KIRREL1Q96J84 757 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 RIT2Q99578 217 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 LRRC2Q9BYS8 371 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 C22orf23Q9BZE7 217 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 TGIF2Q9GZN2 237 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 IGSF9Q9P2J2 1179 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 FBXL21Q9UKT6 434 aa6.23□□□□□ -1.41
DNMT1-220ENST00000589351 MYH9P35579 1960 aaKnown RBP6.23□□□□□ -1.41
DNMT1-220ENST00000589351 IGLV3-22A0A075B6J6 115 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 KLF18A0A0U1RQI7 1052 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 ESYT2A0FGR8 921 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 PRR23AA6NEV1 266 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 NT5C1B-RDH14C9J2C7 533 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 DKC1O60832 514 aaKnown RBP eCLIP6.22□□□□□ -1.41
DNMT1-220ENST00000589351 GAS7O60861 476 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 PDGFBP01127 241 aaPredicted RBP6.22□□□□□ -1.41
DNMT1-220ENST00000589351 CTSAP10619 480 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 DARSP14868 501 aaKnown RBP6.22□□□□□ -1.41
DNMT1-220ENST00000589351 MAPK1P28482 360 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 PBX3P40426 434 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 GPC3P51654 580 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 JAK3P52333 1124 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 NCBP1Q09161 790 aaKnown RBP6.22□□□□□ -1.41
DNMT1-220ENST00000589351 PFKFB3Q16875 520 aaPredicted RBP6.22□□□□□ -1.41
DNMT1-220ENST00000589351 PRR16Q569H4 304 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 XKR3Q5GH77 459 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 NOMO2Q5JPE7 1267 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 CYP26C1Q6V0L0 522 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 ASCL5Q7RTU5 278 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 GPR149Q86SP6 731 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 SPACA3Q8IXA5 215 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 TMEM105Q8N8V8 129 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 FBXO15Q8NCQ5 510 aaPredicted RBP6.22□□□□□ -1.41
DNMT1-220ENST00000589351 CCDC148Q8NFR7 591 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 RDM1Q8NG50 284 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 KCNG4Q8TDN1 519 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 IGSF21Q96ID5 467 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 TEKT3Q9BXF9 490 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 LSG1Q9H089 658 aaKnown RBP6.22□□□□□ -1.41
DNMT1-220ENST00000589351 ZMYND12Q9H0C1 365 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 ADAMTS10Q9H324 1103 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 ACBD3Q9H3P7 528 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 SFXN1Q9H9B4 322 aa6.22□□□□□ -1.41
DNMT1-220ENST00000589351 PCDH12Q9NPG4 1184 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms