RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 LRPAP1P30533 357 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 CD52P31358 61 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 CDH5P33151 784 aaPredicted RBP14.66□□□□□ -0.06
TPM1-215ENST00000558868 RAP1GAPP47736 663 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 RAD23BP54727 409 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 LPIN1Q14693 890 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 CLUL1Q15846 466 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 ZNF394Q53GI3 561 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 GLRA4Q5JXX5 417 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 MON1BQ7L1V2 547 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 ZNF572Q7Z3I7 529 aaPredicted RBP14.66□□□□□ -0.06
TPM1-215ENST00000558868 NT5DC3Q86UY8 548 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 UNC93AQ86WB7 457 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 GPR161Q8N6U8 529 aaKnown RBP14.66□□□□□ -0.06
TPM1-215ENST00000558868 ZNF564Q8TBZ8 553 aaPredicted RBP14.66□□□□□ -0.06
TPM1-215ENST00000558868 CPA5Q8WXQ8 436 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 C18orf25Q96B23 403 aaPredicted RBP14.66□□□□□ -0.06
TPM1-215ENST00000558868 CAPZA3Q96KX2 299 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 NT5C1AQ9BXI3 368 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 SDCBP2Q9H190 292 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 RNF39Q9H2S5 420 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 ABCB6Q9NP58 842 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 KLK14Q9P0G3 267 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 STXBP5LQ9Y2K9 1186 aa14.66□□□□□ -0.06
TPM1-215ENST00000558868 PDCD11Q14690 1871 aaKnown RBP14.65□□□□□ -0.06
TPM1-215ENST00000558868 A0A0C4DFX4 3053 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 CALCAP01258 141 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 TUBBP07437 444 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 CKBP12277 381 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 PAX3P23760 479 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 TAF6P49848 677 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 CDH8P55286 799 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 DSC3Q14574 896 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 ERCC6LQ2NKX8 1250 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 SGO2Q562F6 1265 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 TEX35Q5T0J7 233 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 ZNF618Q5T7W0 954 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 CCDC70Q6NSX1 233 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 CREG2Q8IUH2 290 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 PASD1Q8IV76 773 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 UBL4BQ8N7F7 174 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 SLC4A11Q8NBS3 891 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 HES6Q96HZ4 224 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 MIS12Q9H081 205 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 AGO3Q9H9G7 860 aaKnown RBP14.65□□□□□ -0.06
TPM1-215ENST00000558868 GDAP2Q9NXN4 497 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 STRIP2Q9ULQ0 834 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 COG5Q9UP83 839 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 SNX9Q9Y5X1 595 aa14.65□□□□□ -0.06
TPM1-215ENST00000558868 FRMPD3Q5JV73 1810 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 KCNK3O14649 394 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 THP07101 528 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 MMP8P22894 467 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 SLC1A1P43005 524 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 NDST1P52848 882 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 TAP1Q03518 808 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 BFSP2Q13515 415 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 ELF2Q15723 593 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 CNGA2Q16280 664 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 DPH6Q7L8W6 267 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 LRRN4CLQ8ND94 238 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 SH3TC2Q8TF17 1288 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 WHAMMQ8TF30 809 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 COG1Q8WTW3 980 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 ANKRD7Q92527 254 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 HEXIM2Q96MH2 286 aaKnown RBP14.64□□□□□ -0.07
TPM1-215ENST00000558868 PPP1R10Q96QC0 940 aaKnown RBP14.64□□□□□ -0.07
TPM1-215ENST00000558868 ELOVL4Q9GZR5 314 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 UNC93B1Q9H1C4 597 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 WNT8AQ9H1J5 351 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 PARVAQ9NVD7 372 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.64□□□□□ -0.07
TPM1-215ENST00000558868 ALG6Q9Y672 507 aa14.64□□□□□ -0.07
TPM1-215ENST00000558868 V9GYY5 206 aaPredicted RBP14.64□□□□□ -0.07
TPM1-215ENST00000558868 A0A0U1RQF3 1178 aa14.63□□□□□ -0.07
TPM1-215ENST00000558868 KPNA7A9QM74 516 aa14.63□□□□□ -0.07
TPM1-215ENST00000558868 ZNF185O15231 689 aa14.63□□□□□ -0.07
TPM1-215ENST00000558868 HUS1O60921 280 aa14.63□□□□□ -0.07
TPM1-215ENST00000558868 RRM1P23921 792 aa14.63□□□□□ -0.07
TPM1-215ENST00000558868 RPL9P32969 192 aaKnown RBP14.63□□□□□ -0.07
TPM1-215ENST00000558868 MESDQ14696 234 aa14.63□□□□□ -0.07
TPM1-215ENST00000558868 MMS22LQ6ZRQ5 1243 aa14.63□□□□□ -0.07
TPM1-215ENST00000558868 ERICH1Q86X53 443 aa14.63□□□□□ -0.07
TPM1-215ENST00000558868 TFAP2BQ92481 460 aa14.63□□□□□ -0.07
TPM1-215ENST00000558868 C11orf70Q9BRQ4 267 aa14.63□□□□□ -0.07
TPM1-215ENST00000558868 TRPV6Q9H1D0 765 aa14.63□□□□□ -0.07
TPM1-215ENST00000558868 CXCL16Q9H2A7 254 aa14.63□□□□□ -0.07
TPM1-215ENST00000558868 SNX25Q9H3E2 840 aa14.63□□□□□ -0.07
TPM1-215ENST00000558868 PAK6Q9NQU5 681 aaPredicted RBP14.63□□□□□ -0.07
TPM1-215ENST00000558868 ARGLU1Q9NWB6 273 aaPredicted RBP14.63□□□□□ -0.07
TPM1-215ENST00000558868 WDR35Q9P2L0 1181 aa14.63□□□□□ -0.07
TPM1-215ENST00000558868 TRIP11Q15643 1979 aa14.63□□□□□ -0.07
TPM1-215ENST00000558868 MYO1FO00160 1098 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 PTGESO14684 152 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 PPEF2O14830 753 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 ATMINO43313 823 aaPredicted RBP14.62□□□□□ -0.07
TPM1-215ENST00000558868 SPOPO43791 374 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 CFHP08603 1231 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 CXCR5P32302 372 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 CDK7P50613 346 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms