RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 RAD23BP54727 409 aa12.19□□□□□ -0.46
FAM60A-206ENST00000539409 BCAR1P56945 870 aa12.19□□□□□ -0.46
FAM60A-206ENST00000539409 HTRA4P83105 476 aaPredicted RBP12.19□□□□□ -0.46
FAM60A-206ENST00000539409 ORC1Q13415 861 aa12.19□□□□□ -0.46
FAM60A-206ENST00000539409 DSTYKQ6XUX3 929 aa12.19□□□□□ -0.46
FAM60A-206ENST00000539409 NOP9Q86U38 636 aaKnown RBP12.19□□□□□ -0.46
FAM60A-206ENST00000539409 SLC20A1Q8WUM9 679 aa12.19□□□□□ -0.46
FAM60A-206ENST00000539409 SUSD3Q96L08 255 aa12.19□□□□□ -0.46
FAM60A-206ENST00000539409 SLC9A7Q96T83 725 aa12.19□□□□□ -0.46
FAM60A-206ENST00000539409 ELOVL4Q9GZR5 314 aa12.19□□□□□ -0.46
FAM60A-206ENST00000539409 SSU72P8A0A1W2PR75 194 aa12.19□□□□□ -0.46
FAM60A-206ENST00000539409 ALDH2P05091 517 aa12.19□□□□□ -0.46
FAM60A-206ENST00000539409 PDE6CP51160 858 aa12.19□□□□□ -0.46
FAM60A-206ENST00000539409 NDST1P52848 882 aa12.19□□□□□ -0.46
FAM60A-206ENST00000539409 BTG3Q14201 252 aaPredicted RBP12.19□□□□□ -0.46
FAM60A-206ENST00000539409 ASTE1Q2TB18 679 aaPredicted RBP12.19□□□□□ -0.46
FAM60A-206ENST00000539409 WSCD1Q658N2 575 aa12.19□□□□□ -0.46
FAM60A-206ENST00000539409 TMEM173Q86WV6 379 aaPredicted RBP12.19□□□□□ -0.46
FAM60A-206ENST00000539409 HERC6Q8IVU3 1022 aa12.19□□□□□ -0.46
FAM60A-206ENST00000539409 DDX1Q92499 740 aaKnown RBP12.19□□□□□ -0.46
FAM60A-206ENST00000539409 ADAM28Q9UKQ2 775 aa12.19□□□□□ -0.46
FAM60A-206ENST00000539409 PYCARDQ9ULZ3 195 aa12.19□□□□□ -0.46
FAM60A-206ENST00000539409 MRPL42Q9Y6G3 142 aaKnown RBP12.19□□□□□ -0.46
FAM60A-206ENST00000539409 HCRTO43612 131 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 ODC1P11926 461 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 ATP2A2P16615 1042 aaKnown RBP12.18□□□□□ -0.46
FAM60A-206ENST00000539409 WARSP23381 471 aaKnown RBP12.18□□□□□ -0.46
FAM60A-206ENST00000539409 C9orf50Q5SZB4 431 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 OSTM1Q86WC4 334 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 CCDC170Q8IYT3 715 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 SLC4A11Q8NBS3 891 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 PHOSPHO2Q8TCD6 241 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 BCL7CQ8WUZ0 217 aaPredicted RBP12.18□□□□□ -0.46
FAM60A-206ENST00000539409 CCDC42Q96M95 316 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 MTIF3Q9H2K0 278 aaKnown RBP12.18□□□□□ -0.46
FAM60A-206ENST00000539409 FAN1Q9Y2M0 1017 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 TIMM13Q9Y5L4 95 aaPredicted RBP12.18□□□□□ -0.46
FAM60A-206ENST00000539409 NT5C1B-RDH14C9J2C7 533 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 GABRDO14764 452 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 TADA2AO75478 443 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 CYP11A1P05108 521 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 GNA15P30679 374 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 ALDH7A1P49419 539 aaKnown RBP12.18□□□□□ -0.46
FAM60A-206ENST00000539409 KIF11P52732 1056 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 BPIFB4P59827 614 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 TOGARAM2Q6ZUX3 1019 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 TMEM86AQ8N2M4 240 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 OR6B3Q8NGW1 331 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 TMEM176AQ96HP8 235 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 COLEC11Q9BWP8 271 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 NT5C1AQ9BXI3 368 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 STXBP5LQ9Y2K9 1186 aa12.18□□□□□ -0.46
FAM60A-206ENST00000539409 NDUFA10O95299 355 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 PAEPP09466 180 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 FAM163BP0C2L3 166 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 CHRNB2P17787 502 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 LMO2P25791 158 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 CDR2Q01850 454 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 TAF3Q5VWG9 929 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 UNC93AQ86WB7 457 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 AGPAT1Q99943 283 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 ZSWIM1Q9BR11 485 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 ZBED2Q9BTP6 218 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 SNX25Q9H3E2 840 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 DEF6Q9H4E7 631 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 SPTLC3Q9NUV7 552 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.17□□□□□ -0.46
FAM60A-206ENST00000539409 PCDHB8Q9UN66 801 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 INSL6Q9Y581 213 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 VWA8A3KMH1 1905 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 LAMA3Q16787 3333 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 A0A087X0T9 212 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 A8MXQ7 604 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 FAM228BP0C875 321 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 ANXA13P27216 316 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 GNL1P36915 607 aaPredicted RBP12.17□□□□□ -0.46
FAM60A-206ENST00000539409 GFPT1Q06210 699 aaPredicted RBP12.17□□□□□ -0.46
FAM60A-206ENST00000539409 KCNT2Q6UVM3 1135 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 PALB2Q86YC2 1186 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 GLYCTKQ8IVS8 523 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 LNX1Q8TBB1 728 aaPredicted RBP12.17□□□□□ -0.46
FAM60A-206ENST00000539409 TFAP2BQ92481 460 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 DESI2Q9BSY9 194 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 GPR62Q9BZJ7 368 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 DPEP3Q9H4B8 488 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 ADAMTS1Q9UHI8 967 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 DSEQ9UL01 958 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 ZKSCAN5Q9Y2L8 839 aa12.17□□□□□ -0.46
FAM60A-206ENST00000539409 EPN1Q9Y6I3 576 aaPredicted RBP12.17□□□□□ -0.46
FAM60A-206ENST00000539409 SF3B1O75533 1304 aaKnown RBP eCLIP12.17□□□□□ -0.464e-6■■■■■ 73.6
FAM60A-206ENST00000539409 DDX3XO00571 662 aaKnown RBP eCLIP12.16□□□□□ -0.461e-12■■□□□ 13.8
FAM60A-206ENST00000539409 ZNF263O14978 683 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 TRAPPC3O43617 180 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 AKR1B10O60218 316 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 MMEP08473 750 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 LINC00271P0C7V0 271 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 LAG3P18627 525 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 TYMPP19971 482 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 BRD2P25440 801 aaKnown RBP12.16□□□□□ -0.46
FAM60A-206ENST00000539409 CYLC1P35663 651 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms